Basic Information

Insect: Elymnias hypermnestra
Gene Symbol: -
Assembly: GCA_015832385.1
Location: JACTOM010000618.1:1-17860[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.036 2.9 9.2 5.2 1 23 386 408 386 408 0.96

2 12 0.001 0.081 14.1 1.3 2 23 416 437 415 437 0.90

3 12 0.00077 0.062 14.4 4.4 2 23 444 465 443 465 0.97

4 12 0.00052 0.042 15.0 1.8 1 23 471 493 471 493 0.98

5 12 4.2e-05 0.0034 18.4 3.8 1 23 499 521 499 521 0.98

6 12 7.6e-05 0.0061 17.6 3.0 1 23 527 549 527 549 0.98

7 12 5.7e-06 0.00046 21.1 2.5 1 23 555 577 555 577 0.98

8 12 5e-05 0.0041 18.2 1.9 1 23 583 605 583 605 0.98

9 12 0.0014 0.11 13.6 2.2 1 23 611 633 611 633 0.98

10 12 0.0024 0.2 12.9 2.1 1 23 639 661 639 661 0.98

11 12 0.00082 0.066 14.4 1.8 1 23 667 689 667 689 0.98

12 12 0.00026 0.021 15.9 3.8 1 23 695 717 695 717 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.036	2.9	9.2	5.2	1	23	386	408	386	408	0.96
2	12	0.001	0.081	14.1	1.3	2	23	416	437	415	437	0.90
3	12	0.00077	0.062	14.4	4.4	2	23	444	465	443	465	0.97
4	12	0.00052	0.042	15.0	1.8	1	23	471	493	471	493	0.98
5	12	4.2e-05	0.0034	18.4	3.8	1	23	499	521	499	521	0.98
6	12	7.6e-05	0.0061	17.6	3.0	1	23	527	549	527	549	0.98
7	12	5.7e-06	0.00046	21.1	2.5	1	23	555	577	555	577	0.98
8	12	5e-05	0.0041	18.2	1.9	1	23	583	605	583	605	0.98
9	12	0.0014	0.11	13.6	2.2	1	23	611	633	611	633	0.98
10	12	0.0024	0.2	12.9	2.1	1	23	639	661	639	661	0.98
11	12	0.00082	0.066	14.4	1.8	1	23	667	689	667	689	0.98
12	12	0.00026	0.021	15.9	3.8	1	23	695	717	695	717	0.98

Sequence Information

Coding Sequence: ATGCGATGCTGTGTGCCTTTCTGTAGAAGCATTGCAAACAATGCCGCGGGAGCAGCTGATATCACATTTCACGATTTCCCATCGGATGCGGCACTCCGCATGAAGTGGCTCAGGGCCCTCGGAAAACATGATCAGCCTCTTAAAAAGTCTGTGGTCTGCTCGCAGCATTTTCTGGATGAAGAGTTTTGTGACATTGAAGGTGGCCAGAGACAAGTTCGTTCCGGTGTCATACCATCGACAGTTAAGCTGTGTATGATTTGCTTGGATACACACAGAAATTTAGTTTCACTTAGCAAATATAACTTGGAAGAAGCATATGAAAAGCTGACAGGACATTCCATTCGTCGCGAAGGCAACCTTAAACAAACACTGTGCAAGGAATGTGCTCAGCGTTTGATAAATTTCGACAGGTTTAGATCCAAAAGCTTGAGAGCCCGTTCAGCGATGATGACCTTGGTTAATATGCATGAAACAGTAACAATGCGACACATAAAGCAGATGAACCATATGAGAGAACTACTTAAATCTAATATTGTTAGGATAGATTTTACACCTGATCACTGTGACTTACACCTAAAAGAATACAACTATGAAGATGTACAGACAGACCCAGGAAACATTATGCTACCTGATGCAATTGATGCGATAAAAAGTGAATACTATGAACGTGTGTTGGATGGAAGTGGTATAGATCTGAATTCGAAAGAAACAAAAGATGATATTGAGCATGTAAATGTTGAAAATCAGgagtgtataaataatatgttagaCGGTAGCATATTGTTGGATACAAAACTTATGGACGAAGCCCTAAGCAAGGAACTGGGTTTAGTTGAATCTATCAAGTCAGAGTGCTCAGTTTCTTCTAACGACGCCTACAACGGCCACAACGATGGCACTGAGAGTAATCTTGACATGGGTGGTGATTCCTCTGCTGATTACCCTCATACGTTCGCAAATATGTTGCCGAGTCAGCTATACGAAAGTGCCCTCGaaaagaaaaatactatatacTGTGAGACGGACAACTTAAAAACAGGAGTTCCGGTCAATGAAACGGAGTTCAAGTTTGCAGAAAAAGTTTCTGATAAACTTCAGGTTAATAGCCTTATTGTAATATCCGATACCTCAACTAAGGCGAATTTTCTACATGAGTATTTATGTGAGCATTGCGAATATAAATGTAGCAAACgcgataatattataaagcatttGAAAAACCATACTATTGAGGAGCTGAGTTTTTCGTGTATTTCATGCAATAATAGATTTAAAACTAAAGATAGTTTAGCgagtcacatgagaattcacaccggtgaaaagccATTATCGTGTAACGTATGTGAGTATGCATGCCACCAAAAAGGACACCTTGtaagacacatgagaattcacaccggtgaaaagccTTTTTCGTGTAacttatgcgagtatgcatgcagagaaAAAGGAAAGCTTGTAAGGCACATGAAAATTCACACCGGTgtaaaacctttctcgtgtaacttgtgcgagtatgcatgcaaacATAAAGGAAGCCTAAtaagacacatgagaattcacgccggtgaaaagcctttctcgtgtaacttatgcgagtatgcatgcaaacATGAAGGAAACCTTGTAaaacacatgagaattcacaccggtgaaaagcctttctcgtgtaacttatgcgagtatgcatgcaaacGTAAAGGAAACCTTTtaagacacatgagaattcacatcGGGGTAAAACCTTTTCCGTGTAAATTATGCAAGTATGCATGCAATCAAAAAGTAAGCCTTGAGAATcatatgagaattcacaccggcgaaaagcctttctcgtgtaaattatgcgtaTATGCATCCAGAGAAAAAAGACATCTAGtaagacacatgagaattcacaccggtgaaaagcctttctcgtgtaCCTTATGTGAGTATACATGCGGAGAAAAAGAAAAGCTTGTAAGACATATGaaaattcacaccggtgaaaagcctttctcgtgtaaattatgcgagtatgcatgcagagaaAAAGGAAAGCTTgtaagtcacatgagaattcacaccggtgaaaagcctttctcgtgtaaattatgcgaatATGCATGCAGACATAGAGAGAGCCTTGTAAGACACATAAGAATTCACACAGGTGAAAAGCCTTTCTCATGTAACTTATGTCATTTATACAAAGCAGGAATAGTGTACCCTACTATACAGGCCCTACTATACTTCCCTGTGGCACTCCGAATTTATTTAACTCCTCGGATACCAAGTTTAGCCAAGAGGATTGGGCTGGAGACCTTATCAAAGGCTTTAGCCAAATCTAGGAAAACACCCAGGCATTTTAACTCTTTGTCCAAGCTTAACGATATTTCGGACGCTACATTTGCGGATGGAAAAACGTTGCTAGTTACAATTATTGATACGACATTACAACATGGATACACCgNN
Protein Sequence: MRCCVPFCRSIANNAAGAADITFHDFPSDAALRMKWLRALGKHDQPLKKSVVCSQHFLDEEFCDIEGGQRQVRSGVIPSTVKLCMICLDTHRNLVSLSKYNLEEAYEKLTGHSIRREGNLKQTLCKECAQRLINFDRFRSKSLRARSAMMTLVNMHETVTMRHIKQMNHMRELLKSNIVRIDFTPDHCDLHLKEYNYEDVQTDPGNIMLPDAIDAIKSEYYERVLDGSGIDLNSKETKDDIEHVNVENQECINNMLDGSILLDTKLMDEALSKELGLVESIKSECSVSSNDAYNGHNDGTESNLDMGGDSSADYPHTFANMLPSQLYESALEKKNTIYCETDNLKTGVPVNETEFKFAEKVSDKLQVNSLIVISDTSTKANFLHEYLCEHCEYKCSKRDNIIKHLKNHTIEELSFSCISCNNRFKTKDSLASHMRIHTGEKPLSCNVCEYACHQKGHLVRHMRIHTGEKPFSCNLCEYACREKGKLVRHMKIHTGVKPFSCNLCEYACKHKGSLIRHMRIHAGEKPFSCNLCEYACKHEGNLVKHMRIHTGEKPFSCNLCEYACKRKGNLLRHMRIHIGVKPFPCKLCKYACNQKVSLENHMRIHTGEKPFSCKLCVYASREKRHLVRHMRIHTGEKPFSCTLCEYTCGEKEKLVRHMKIHTGEKPFSCKLCEYACREKGKLVSHMRIHTGEKPFSCKLCEYACRHRESLVRHIRIHTGEKPFSCNLCHLYKAGIVYPTIQALLYFPVALRIYLTPRIPSLAKRIGLETLSKALAKSRKTPRHFNSLSKLNDISDATFADGKTLLVTIIDTTLQHGYTX

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00642406;
90% Identity: iTF_00642406;
80% Identity: iTF_00642406;