Basic Information

Insect: Elymnias hypermnestra
Gene Symbol: -
Assembly: GCA_015832385.1
Location: JACTOM010000103.1:265699-271143[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.19 16 6.9 1.9 1 23 62 85 62 85 0.90

2 27 0.86 70 4.8 0.8 2 23 112 134 111 134 0.94

3 27 0.03 2.5 9.4 0.7 2 23 157 178 156 178 0.97

4 27 0.018 1.4 10.2 0.3 1 23 182 204 182 204 0.96

5 27 0.11 9.1 7.6 1.0 1 23 209 232 209 232 0.89

6 27 1.1 87 4.5 5.1 2 23 240 262 239 262 0.93

7 27 0.00062 0.05 14.7 3.8 1 23 268 291 268 291 0.97

8 27 0.00026 0.021 15.9 9.9 1 23 297 319 297 319 0.98

9 27 9.1e-06 0.00073 20.5 1.1 1 23 325 347 325 347 0.99

10 27 2.9 2.3e+02 3.2 1.0 1 8 353 360 353 361 0.90

11 27 0.0028 0.22 12.7 1.0 1 23 443 466 443 466 0.94

12 27 9 7.3e+02 1.6 0.3 3 23 494 515 492 515 0.88

13 27 0.08 6.5 8.1 0.2 2 23 538 559 537 559 0.97

14 27 0.0002 0.016 16.3 0.9 1 23 563 585 563 585 0.99

15 27 0.11 8.8 7.7 2.8 1 23 590 613 590 613 0.93

16 27 0.29 23 6.3 4.6 2 23 621 643 620 643 0.93

17 27 0.0034 0.28 12.4 0.5 3 23 652 673 651 673 0.93

18 27 2.2e-05 0.0018 19.3 5.1 1 23 679 701 679 701 0.99

19 27 0.066 5.3 8.4 0.8 1 23 786 809 786 809 0.97

20 27 0.034 2.7 9.3 0.5 2 23 882 903 881 903 0.97

21 27 0.018 1.4 10.2 0.5 1 23 907 929 907 929 0.97

22 27 0.00028 0.022 15.8 1.3 1 23 934 957 934 957 0.97

23 27 0.03 2.4 9.4 2.5 1 23 964 987 964 987 0.94

24 27 0.0087 0.71 11.1 1.3 2 23 995 1017 995 1017 0.95

25 27 0.00018 0.015 16.4 1.0 1 23 1023 1045 1023 1045 0.99

26 27 0.021 1.7 9.9 1.5 1 23 1051 1073 1051 1073 0.99

27 27 8.7e-05 0.0071 17.4 3.0 1 23 1079 1102 1079 1102 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.19	16	6.9	1.9	1	23	62	85	62	85	0.90
2	27	0.86	70	4.8	0.8	2	23	112	134	111	134	0.94
3	27	0.03	2.5	9.4	0.7	2	23	157	178	156	178	0.97
4	27	0.018	1.4	10.2	0.3	1	23	182	204	182	204	0.96
5	27	0.11	9.1	7.6	1.0	1	23	209	232	209	232	0.89
6	27	1.1	87	4.5	5.1	2	23	240	262	239	262	0.93
7	27	0.00062	0.05	14.7	3.8	1	23	268	291	268	291	0.97
8	27	0.00026	0.021	15.9	9.9	1	23	297	319	297	319	0.98
9	27	9.1e-06	0.00073	20.5	1.1	1	23	325	347	325	347	0.99
10	27	2.9	2.3e+02	3.2	1.0	1	8	353	360	353	361	0.90
11	27	0.0028	0.22	12.7	1.0	1	23	443	466	443	466	0.94
12	27	9	7.3e+02	1.6	0.3	3	23	494	515	492	515	0.88
13	27	0.08	6.5	8.1	0.2	2	23	538	559	537	559	0.97
14	27	0.0002	0.016	16.3	0.9	1	23	563	585	563	585	0.99
15	27	0.11	8.8	7.7	2.8	1	23	590	613	590	613	0.93
16	27	0.29	23	6.3	4.6	2	23	621	643	620	643	0.93
17	27	0.0034	0.28	12.4	0.5	3	23	652	673	651	673	0.93
18	27	2.2e-05	0.0018	19.3	5.1	1	23	679	701	679	701	0.99
19	27	0.066	5.3	8.4	0.8	1	23	786	809	786	809	0.97
20	27	0.034	2.7	9.3	0.5	2	23	882	903	881	903	0.97
21	27	0.018	1.4	10.2	0.5	1	23	907	929	907	929	0.97
22	27	0.00028	0.022	15.8	1.3	1	23	934	957	934	957	0.97
23	27	0.03	2.4	9.4	2.5	1	23	964	987	964	987	0.94
24	27	0.0087	0.71	11.1	1.3	2	23	995	1017	995	1017	0.95
25	27	0.00018	0.015	16.4	1.0	1	23	1023	1045	1023	1045	0.99
26	27	0.021	1.7	9.9	1.5	1	23	1051	1073	1051	1073	0.99
27	27	8.7e-05	0.0071	17.4	3.0	1	23	1079	1102	1079	1102	0.97

Sequence Information

Coding Sequence: ATGAATATAAAGAGAGATACAGATGATGTAAACCGCATTGATGCAAATGAAGACATTCATATAATCAAGAAGGCAATAAATAGGCGACAAGGCAGCGAAGAACTGTCGAAACATTTGATCAACGTCAGAGAAATATTCCTCTGGTCAAATGCTACACCTATTAGAACTCACAGCGACATGGGTTATTTGTGCTGTTATTGTAATGACCAATTTAAAGAACCTGCGGATTTAAAAAAGCACACTTTGGACAACCACGAGGGTATAGACAACTCTAGCTTCACGAAACGTAGAGATTTGAACGCTTTCTATGTCAAAGTTGATATTACTGAGTTACGCTGCAAAATTTGCGAAGAACGCCTCAATAATATAGAGGAGATTGTGCATCATCTGAAAAACAAACACAACAAAAGACTATTCACTGAAATCAAAAACCATTTGGTGccttttaaatttgaaacagaaaccttacaatgttatatttgctCGAATGtcttcaataaattcaaagtattatTGGAGCATATGAACACGCACGTAACAAattacatttgtaaatattgcagCGCTGGATTCGTTAATAGGAGGCGACTCCTCGTTCATTTAGATCAGCATAAAGAGGGTATATTTAAATGTGAGATATGCTCGGAGGTATTTGCTACGCTGACAAAGAAAAAGTTTCACATCAAGTCCGTCCACAAACCCGCAAAGTATAGGAATAAATGTAGGTTGTGTAATGAATGTTTCAAGGATTACCACAAGAAGGTGAAGCATTTGCTGGAGGTTCATCAAGTGCAAGAAACGCACAAGTGTAACGCTTGTGATAGGACATTTACAACCCGTAAAGCATTCAGAGTCCACACTCAAAGAGATCACATAATGGAGAGACGCCATAAGTGCAAGCATTGTGATAAAAGCTTCTTCCAATCAACCTGTCTCAAGGATCACATGCTTACACATACGGGAATAAGAAATTTCCAATGCGACGTTTGTTTGAAACGTTACGGAAGGAAAAGTACTTTGCGCGATCATATGCGGATACATGCGGACGATAGGCGATTTAAATGTGAACATTGCGGTCGTCGTCAGTTAAAAGTGAAAAGCAAAATATCTAACAAAACGGACAAGAGTGCTTTAGTGAAAAGTAAAAAGCGGAAAGATTGTGACACTATCGATGTTGCAGTTATTCAGAATATTTACAAACGTAACAATAGTAAAGAAGATGATACAGATTCACCGGTGAGAGAATTTGTAAAACACCGTaacaattttaaagttattttagcGAATTCAAATGCGACTCCGATTCGTTATCACATTGGTGGTGGTTATGTTTGTTGCTTTTGCACCGAACAATATCCTAATCCAGCTAATCTAAAGAAACACACGTTACTGGTACATAACGAAGAAGacagacataaatatataaagaaacaagCTCTTAATGCTTATATACTTAAACTAGATATAACATCCCTAAAATGTATTCTCTGCGATAGCAGTATGACAACATTAGATAAGCTTTTTGAGCATCTGAAAATTGAACACGACAAAACTGTTTATAACGATATAAAAAATCAGATAGTGCCTTTCAAGTTTGATGACGATCAACTTAGATGCGTTATTTGTTCATTAGTTTTTGGGAAATTCAAAGGCATGCTTGAGCATATGAATACGCACTATAGGAATTACGTCTGTAACATATGCAACGCCGGATGCATTAATAGAAAAGTGCTGACTCGGCATATGATGACGCACAAGACCGGGTCGCATAAATGCGATGAATGTTCGAAAGAGTTTAATACATTGCAGAAGAAGAGACTGCACGAGCAATCCGTGCACAGAAATATGAATTATCGCAGCAAATGTAGATATTGCAAAGAGAGATTTAAAACAAATCACATGCGAGATCAGCATATGACACAAGAGCATGGAGTCGCGCCAATTATACGTGTTTGTTTAGCGTGTGATAGGACATTTACAAGTCAAAACGCTTTACGGATTCACAATAAACGCGACCATTTAATGGAGCGTCAGTATCGGTGTACAGAATGCAGCAAGAGTTTCTATAAAAGGGTACAGCTGCAACATCACATGTTGAAACATACGGGTGGTCATCGGATAGTCAAAAACGAAATATCCGACAAAGTCATGAATGGCAAAAACAAGAAGTTAATTAAAGCCCCTATAAATTGTAACACTGTAAACAAATTAGCCCTAACAAAAGGGCTAGACCGTGAGAATAAGAAATCTAAAAATCCAACACAAATTCAGGAACATCAAAAGCATAGCAACAACTTCGAAGTTGTGTTAGCAAACACAACTGCAACACCGATTCGAAGTCACAACGGGATTGCTTACACCTGTTGCTTTTGCTCTGATAATTACATAAATCCAGCAGATTTGAAAGCTCATACTCTCACGGTACACAATAATAACACAGATAGACGAGAGTACATGAAGAAACAGACATCACGAGCTTATTTACTTAAACTTGACATTACCTTACTTAAATGTATACTCTGCGAAGAAAACATAGATACACTAGAAGGCTTGTTTGACCATCTACAAAACGAGCACAAAAAACTTATCTACACAGATATAAAGAATCAAATTGTACCCTTTAAATTCGTAAGCGAGGAACTTCAATGCGCCATTTGCCCACTAGTTTTCAATAGGTTCAAAATTCTCCTAGAACATATGCACACACATTATAGAAATTACATATGCGAAATTTGCGACACCGGATGCATTAATAGAAGAGTGCTTTTAACTCATCAAGGGACTCACAAAATAGGCTCATTCAAATGTGGtaaatgcaataaagttttcGCAACGCAACAAAGGAGAACGACTCACATGAATATAGTCCATAAATACATGAACAAAGCCCATAAATGCGGTGTATGCAACGAGAGGTTTAAAAGCAGTCAAATGAAAGCTCAGCATATGACCTTGAAGCATGGAATGTCTCCAATTATCAGGAAATGTTTGGCATGCGACAAAACCTTCACGAGTCAAAACGCTATACGACTTCATAGAAAGAAAGATCATCTAATGGAAAGGCAGTACCAGTGTACTGAATGCGAAATGAGTTTTTTCACTGGTGCTCAATTGAAGTATCATATGTTGAAGCACACGGGGAAGAAGGACTTCCAGTGCGACGTCTGCTTAAAGTGGTTTGGGAGGAAATGCGTTTTGCGTGAACATATGCGTATACATACAAATGATAGGCGGTTCAGGTGTTTGCATTGCGGTCGTGGTTTTGTCCAAAAATGCAGTTTGCGAGGACACATGCGCGCTATACACGGAGAAATAGATGATAGAATAGTATAA
Protein Sequence: MNIKRDTDDVNRIDANEDIHIIKKAINRRQGSEELSKHLINVREIFLWSNATPIRTHSDMGYLCCYCNDQFKEPADLKKHTLDNHEGIDNSSFTKRRDLNAFYVKVDITELRCKICEERLNNIEEIVHHLKNKHNKRLFTEIKNHLVPFKFETETLQCYICSNVFNKFKVLLEHMNTHVTNYICKYCSAGFVNRRRLLVHLDQHKEGIFKCEICSEVFATLTKKKFHIKSVHKPAKYRNKCRLCNECFKDYHKKVKHLLEVHQVQETHKCNACDRTFTTRKAFRVHTQRDHIMERRHKCKHCDKSFFQSTCLKDHMLTHTGIRNFQCDVCLKRYGRKSTLRDHMRIHADDRRFKCEHCGRRQLKVKSKISNKTDKSALVKSKKRKDCDTIDVAVIQNIYKRNNSKEDDTDSPVREFVKHRNNFKVILANSNATPIRYHIGGGYVCCFCTEQYPNPANLKKHTLLVHNEEDRHKYIKKQALNAYILKLDITSLKCILCDSSMTTLDKLFEHLKIEHDKTVYNDIKNQIVPFKFDDDQLRCVICSLVFGKFKGMLEHMNTHYRNYVCNICNAGCINRKVLTRHMMTHKTGSHKCDECSKEFNTLQKKRLHEQSVHRNMNYRSKCRYCKERFKTNHMRDQHMTQEHGVAPIIRVCLACDRTFTSQNALRIHNKRDHLMERQYRCTECSKSFYKRVQLQHHMLKHTGGHRIVKNEISDKVMNGKNKKLIKAPINCNTVNKLALTKGLDRENKKSKNPTQIQEHQKHSNNFEVVLANTTATPIRSHNGIAYTCCFCSDNYINPADLKAHTLTVHNNNTDRREYMKKQTSRAYLLKLDITLLKCILCEENIDTLEGLFDHLQNEHKKLIYTDIKNQIVPFKFVSEELQCAICPLVFNRFKILLEHMHTHYRNYICEICDTGCINRRVLLTHQGTHKIGSFKCGKCNKVFATQQRRTTHMNIVHKYMNKAHKCGVCNERFKSSQMKAQHMTLKHGMSPIIRKCLACDKTFTSQNAIRLHRKKDHLMERQYQCTECEMSFFTGAQLKYHMLKHTGKKDFQCDVCLKWFGRKCVLREHMRIHTNDRRFRCLHCGRGFVQKCSLRGHMRAIHGEIDDRIV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -