Ehyp020566.1
Basic Information
- Insect
- Elymnias hypermnestra
- Gene Symbol
- -
- Assembly
- GCA_015832385.1
- Location
- JACTOM010000914.1:458876-469345[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.0015 0.12 13.6 7.3 1 21 192 212 192 214 0.95 2 30 0.00074 0.06 14.5 0.3 2 20 249 267 248 269 0.93 3 30 3.4e-05 0.0027 18.7 0.3 3 23 297 318 295 318 0.96 4 30 0.41 33 5.9 0.9 1 23 368 390 368 390 0.97 5 30 0.14 11 7.3 0.1 1 23 409 431 409 431 0.96 6 30 0.00038 0.031 15.4 1.3 2 23 472 493 471 493 0.96 7 30 0.0004 0.032 15.3 2.3 2 23 532 554 532 554 0.97 8 30 0.045 3.6 8.9 3.7 1 23 604 627 604 627 0.97 9 30 0.00041 0.033 15.3 0.2 1 23 684 706 684 706 0.97 10 30 0.021 1.7 9.9 6.7 2 23 718 739 717 739 0.96 11 30 0.082 6.6 8.1 1.9 2 23 751 772 750 772 0.96 12 30 0.0044 0.36 12.1 1.7 1 23 782 804 782 804 0.98 13 30 0.011 0.88 10.8 5.8 1 23 832 854 832 854 0.96 14 30 0.00031 0.025 15.7 1.4 1 23 865 887 865 887 0.97 15 30 3.6e-05 0.0029 18.6 1.4 1 23 895 917 895 917 0.97 16 30 0.0004 0.032 15.3 0.1 2 23 937 959 936 959 0.97 17 30 1 81 4.6 0.9 1 23 977 999 977 999 0.91 18 30 0.42 34 5.8 3.2 1 23 1006 1028 1006 1028 0.96 19 30 0.0075 0.61 11.3 0.7 2 23 1039 1061 1038 1061 0.95 20 30 0.0011 0.093 13.9 0.2 2 23 1084 1105 1083 1105 0.95 21 30 0.2 16 6.8 0.6 2 20 1109 1127 1108 1128 0.92 22 30 8.7 7e+02 1.7 5.9 2 23 1148 1170 1147 1170 0.94 23 30 0.00078 0.063 14.4 0.8 1 23 1185 1207 1185 1207 0.96 24 30 0.57 46 5.4 4.5 3 23 1215 1235 1213 1235 0.96 25 30 0.015 1.2 10.4 0.8 2 23 1246 1268 1245 1268 0.95 26 30 3.5 2.8e+02 2.9 5.9 2 23 1285 1303 1285 1303 0.82 27 30 0.15 12 7.2 1.0 2 21 1307 1326 1307 1327 0.93 28 30 0.24 19 6.6 0.4 2 23 1376 1397 1375 1397 0.93 29 30 0.001 0.083 14.0 0.4 2 23 1408 1430 1407 1430 0.95 30 30 2 1.6e+02 3.7 2.4 2 20 1468 1486 1467 1488 0.93
Sequence Information
- Coding Sequence
- ATGGCACTCAAACTAGGAAAATGCAGGCTCTGCCTGAAATTGGGCGATTTCTATTCCATATTTACAATGGACAACAATTTGCAGCTAGCGGAAATGGTTATGGAATGCGCCCGTGTAAAAATATATGACGGCGACGGGCTTCCAGATAAGATTTGTAGCGAATGCATACAAAAGCTTAGCAGTGCACATATTTTCAAACAACAATGTGAACGATCTGATCAAGAACTAAGGCGCAATTATATTGCACCTTCAGACTTTAGTCCCAGTCCACCGCCGCAAAATAGACAGAGCAGCGACTCGGCGTTTTCAAGTCACACTGAAATTTCAAAGCCATCGTCATCTGAGAGTCAAACTAACCCTCTTAATCGAAACAGAAAACGAAGTAGAGACAGCATTGACAATGTGTCAACTAGTAGTCACTTCCGCGACTATAAGCCAGGAAGCTCAAAACGCGTTGATGAATTACGAATGTCTCAGAAAAAACCACGGATGTCAGCAACCTCAGATTCCGACTACGATGATAACAATGCATCACTTTATTCTGCAGAAACCGACTCGGATGAGCCGTTGCAACATAAATGTAAACAATGTACTAAATCGTTCAGATCGTCGAAAAGTCTATCGGCGCATATGAAATGTCATAAACGAAAGTACAATCAAGAGATGCAAATTGAAAAGccgaaatacaaaaaaattgaaatacccACAGAGATGAGGGACGCCAAAGACGATGACGATAAACTCAATTGCGATAAATGTGGGAAAACGTTCAAACTTAATATAATGCTCAAACGGCATTACGACATTTGTGGGAAGTCTCCACAGAAAGAGCTACTGGTTTCCCTGGAGCCGATTGATGCGGCGTGTAAGCCTGATGGTAAAATTGACTGCGAAATGTGCACGACCAAGTTTAAGACGATAGAGAACCTAGAGAAACACATGAGGGTAGTTCACGCAGCGGTACTAAAGAGGGAGAAGTTCCCGGTCAATGAAAATGGGAAAATATTGGTGCCATGTTTCTATTGTAACGAGCCATTCGAAGATTACTACCTTCACAGTGCTCATTTCAACTCTTGCCCCAAAAAGTACGACGCTGTAGACTTTCAGTGTCTCGTTTGCCAGAAGCTTATAACGAAGAAGGCTTCTTATTTTCTCCATCTCAAAGCTCATTTTTTTCCCGTAACTCCTACTAAAGTACCGCCGGAGAAGGATGCGAAAGACGGCTTCCAATGTCGCATGTGCAGTAAGATATTACCCTCTCAGGAAGTGCTGATAAGCCATCTCACTGCACATATGTCCAATAAGCTtgatgacgacgacgacttcgTTGATGACGAATCAAGAGAAAGCACTATGGACGATTCAGTTTCTGTACATTCTGAATACAATTCCTACATTTCTAACGGACCTctgaaatgtaaatattgtgACAAAGGCTTCAAATACAAAAAAGCTTTAGACTCTCACGAAATTAAACATATGATTGGTGATATTAAAACCGAGAGACCTGAGAGTAAACTTGTAAAACTAAATCGCTCTGCCAACCAGACAGATGAGTCTGAATCTAGTCAAGATGAAGGCGAGGAGGATAACACCTGTGACATTTGTGAGAAGCAGTTCTCCTATAAAAGACTCCTTCTCCAACACAAACGGACAAAACACAACATGACTTCAGGGACGAAACGAGCAAAGATAAACTTGAAAGATTGCTCCGTCCGTTGCCTAATAtgtgatattgaaatgaaagtGAGTGCCATCAACGAGCACAACCAAAAGCACATATCAGCAAATAtcaaaccgaggaacttgtacaCTTGTAAAGAGTGCTGTGAACAGTTTAAGAGTTGCAGTGGATTGGCTAATCACATCAAATTGGTACATCGTCTCCATCAACCGCCAACATCGAAGAAAATCGTTGTACCATCAGCTGATTTGGCGGATTTTTGTGAAGTCGTTGTGACGAAAGCGGAACCCCTGGATGACCTCCAGAGTCACAACGGCTTTGGTGAGGTCTCCGCGGATGGTGCGCCCCTTGTCAGCTTGAGCGGCTTCACTTGCCCAGTTTGCACGAAGACACTGCCCACTTTGATCTCTCTCAAGAGGCACGTCAACTGGCATAAGAATGTTGGGAACAATATTGAGAAGCAGTTGGAGTGCTTCGTTTGCAAAGAGACTTTTCGTTTCCAATGTCACTACAAGCTGCACATGCGTCAGCACTATAACGATACAAACTTGGATCCGAAGTTTCTCACTTGCACCATATGCAACCGGAAAAGCAAACATTTACGAGCTGCACAAGCCCATATGAATTTCCACAAACAAACGCGTTTCAAAAATAAGGACTACGAATGCTCTATTTGTAAGAGAGTTTTCCAACACCGCAAAGTTTACCTCTCCCATATGGCCATACACTTTAAAAGGGGTGAAAGTGCCAACACTGTTGTGGGAAGTGTTATGCCAAATTCGGCAGATAGAAATAAATTCGACGGCACTCACACTTGTCATCTTTGTGGTAAAGTGTGCGATTCAGAAAACTCTCTCAAACACCATGTAATTTGGCATAATTCAAAAACCTCCCTGTATGGTGCTCGCCACGAGTGTGACATCTGTAACGTTACATTCACAAACAAACGAAGATTAGAGATTCACACTAGAGCACATTTCGAAGACGAAAACGGACCTTTCAAGTGTCACATTTGCGGAAAGGGATTTATAGTAGAAGACTACTTCAGGAGACATGTCAAAGGCCATAACTTTGACCATCAATCCCATAAAAAGAGGATCGAGAAACTGAGAAAGGATAAAGTGAAATGTCCTATTTGCGAGCGGTACTATCCAGATTTAGCCAAACTCATCCGACATCTGCGGAGAACCCATCCAGAGAGTAAGATGATAAAGGAGGATCCCGATGCACCGCCTACCAACTATTACTCCTGTAAACTGTGCGCCAAAGTTTTCTTAGATGAACGCAGATTGCAACATCACGAAGAGGCTCATCTGAGAAAACCAGAATTTTTCAAATGCAAATTCTGCGGGAAGAACACCATCTCTCTGAAGAGCCATAGGATTCACATTAAAGGTCATCTGACTCAAAAGTATATAGATGAACCGTTGAAGTGTCCCAACTGCGAGGAGACCTTCATGCGAGGCTACGACTTGCACTATCATTTGAGGGACGCTCATGGCATCAACGAGACCTGGATCGCAGAACGAGGGCCCCGAACCCTCGATGGCCCGCTCAAAGACCTCCAATGCTCTATATGTTACAAAGTCCTCGCTAGCAAAGGCAACTACGAAAGGCACATAGATTACCACAACTCTCTTAGATGCAACTACTGCTTCGAGTTCTTCAGCACTCTCCGGTTCTTAGAAGGCCATTTGACATTCAGCTGCGAAAAGAAGAAACTCGTGGGTGACACCGAAATCTATCCTAAAAAAGTAAAGTGCCATATATGCTACAAAGCTTTTCATTTACAAGTGAAATTGGACTGTCATTTGCGCACTCAACACGGCATTAAGATATTCAAAGAGGCTTCCGAAGGGAAAAAGGATTTCGTATGCGACTACTGTTTCAGAGTATTCGAGAACGAATACGCTCTTACTACTCACAAAATCTATCATCGCACTGTCGGTTACTACGGCTGCCTATATTGCAACAAAAAGTTTAACACCATGACAGTGTACAGAAAACACAAAAATCACCACTTTGCTCAACTAAACGTTGACAATCCGACAAAATGCGACCATTGCGATGAGACTTTTGTTGCATTCAGAGAAATGATATATCACATGAGAGACGTTCACGGCGACGATAAGGAGTGGATCATATTGCCCAAAGAATCCATCGAAGAGAAATGTAACATATGTCACAAGACATtcttcaatttacacaaacatttAGGTTACCATGAAGAAAATAGATGCAAAAAATGCGGAGAATATTTCTACTCGAGGGTGGACTACGATAATCATTTATGCGCAGTCGACAGCGAAGAAGAAGTTACCGAGAGTACCACAAGTGGCGTTCGTACAGTTTACGAGGAATGCACCTTCTGCTTCAAACCTATAACTAAGAAGAGCTCTAAACGAAAACACGATATGATTCACAAAGGCTCCGGATCTATATCGTGCCGTTTCTGTCCCCTCAAGTTTAAGACCATAGATGCATTTAACATTCACGCCTTCTCCCATAGAAGTAGGAAGTACAAGAAGAAACCGATAAAGTGTCGGAAATGTGGTGAAAAATTTGTGACGTATGGGCCGTTTATGAGGCACATGAAGGGGGTGCATAAGGCTTCTCATAAGCTGCACTACAGAGCTGTTGTGATGCCCGAAAGGTGTGTTGTGTGCCACGAAGACTTTCCGAACTTGCACAACCACTACCGGGCGCACTTGCAAAACCAATGCCAGCAATGTCTCAAGTACTTCACTTCTTTGAAATTGTTCTCTCAACACGTTTGTGATAAAGAAGATGCAGACCCATCAAAAGTGTTTACCAGTGATGCCGATTTGATTGAACTTATTAATACCTACATACCAAAAGACGAACAGGACGATGAGAAGTATTACGGAtatgaagaagaagaaggagaGGAGGAGGAGATGGAAGTGGAAGTAGAAGGTGACATTATGCCTGAAATGGTATCTCAAGATGAAGACAGCCAGAACTCTATAGATATACACGAACAAAAGGTGCATGCGATGGCGCACACCCCCATCATATCAGACGTTCTGTCATTGTTAAAGAAGAAGGAAGACAAATCCCAAGAAGATGGTGATAAAAATAGTTCAAGTGGTAGTGTAATGGTTGTAACCGACGAGGAGTCAGTGGGGTGCGATGATAATATCTACACAGTCATAACTATTGACGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKIYDGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYIAPSDFSPSPPPQNRQSSDSAFSSHTEISKPSSSESQTNPLNRNRKRSRDSIDNVSTSSHFRDYKPGSSKRVDELRMSQKKPRMSATSDSDYDDNNASLYSAETDSDEPLQHKCKQCTKSFRSSKSLSAHMKCHKRKYNQEMQIEKPKYKKIEIPTEMRDAKDDDDKLNCDKCGKTFKLNIMLKRHYDICGKSPQKELLVSLEPIDAACKPDGKIDCEMCTTKFKTIENLEKHMRVVHAAVLKREKFPVNENGKILVPCFYCNEPFEDYYLHSAHFNSCPKKYDAVDFQCLVCQKLITKKASYFLHLKAHFFPVTPTKVPPEKDAKDGFQCRMCSKILPSQEVLISHLTAHMSNKLDDDDDFVDDESRESTMDDSVSVHSEYNSYISNGPLKCKYCDKGFKYKKALDSHEIKHMIGDIKTERPESKLVKLNRSANQTDESESSQDEGEEDNTCDICEKQFSYKRLLLQHKRTKHNMTSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQKHISANIKPRNLYTCKECCEQFKSCSGLANHIKLVHRLHQPPTSKKIVVPSADLADFCEVVVTKAEPLDDLQSHNGFGEVSADGAPLVSLSGFTCPVCTKTLPTLISLKRHVNWHKNVGNNIEKQLECFVCKETFRFQCHYKLHMRQHYNDTNLDPKFLTCTICNRKSKHLRAAQAHMNFHKQTRFKNKDYECSICKRVFQHRKVYLSHMAIHFKRGESANTVVGSVMPNSADRNKFDGTHTCHLCGKVCDSENSLKHHVIWHNSKTSLYGARHECDICNVTFTNKRRLEIHTRAHFEDENGPFKCHICGKGFIVEDYFRRHVKGHNFDHQSHKKRIEKLRKDKVKCPICERYYPDLAKLIRHLRRTHPESKMIKEDPDAPPTNYYSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKNTISLKSHRIHIKGHLTQKYIDEPLKCPNCEETFMRGYDLHYHLRDAHGINETWIAERGPRTLDGPLKDLQCSICYKVLASKGNYERHIDYHNSLRCNYCFEFFSTLRFLEGHLTFSCEKKKLVGDTEIYPKKVKCHICYKAFHLQVKLDCHLRTQHGIKIFKEASEGKKDFVCDYCFRVFENEYALTTHKIYHRTVGYYGCLYCNKKFNTMTVYRKHKNHHFAQLNVDNPTKCDHCDETFVAFREMIYHMRDVHGDDKEWIILPKESIEEKCNICHKTFFNLHKHLGYHEENRCKKCGEYFYSRVDYDNHLCAVDSEEEVTESTTSGVRTVYEECTFCFKPITKKSSKRKHDMIHKGSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYKKKPIKCRKCGEKFVTYGPFMRHMKGVHKASHKLHYRAVVMPERCVVCHEDFPNLHNHYRAHLQNQCQQCLKYFTSLKLFSQHVCDKEDADPSKVFTSDADLIELINTYIPKDEQDDEKYYGYEEEEGEEEEMEVEVEGDIMPEMVSQDEDSQNSIDIHEQKVHAMAHTPIISDVLSLLKKKEDKSQEDGDKNSSSGSVMVVTDEESVGCDDNIYTVITIDD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01017917; iTF_01018767;
- 90% Identity
- -
- 80% Identity
- -