Basic Information

Gene Symbol
-
Assembly
GCA_015832385.1
Location
JACTOM010000079.1:3236981-3243495[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.8 2.5e+03 -0.6 0.0 23 44 344 364 328 366 0.87
2 5 0.022 31 5.5 0.9 22 44 440 461 432 463 0.92
3 5 0.14 1.9e+02 2.9 0.1 23 45 588 609 566 610 0.87
4 5 0.00012 0.17 12.7 0.3 3 44 661 711 659 713 0.87
5 5 0.0091 13 6.7 0.1 17 45 835 869 829 870 0.78

Sequence Information

Coding Sequence
ATGGATCAAATTGTAGTCAAGACGGAGGTACAGCCTAATGGAgatatactattattttatgtCGATGaacATCAGGATGGAGTTGCAAGTATTTTGGAGGAACACCATGATGATGGAATATTACCAGATACAAAATATGTAGTTGAAGATTTTGTGGAAGAAGACTCACCGGATGAACAGGAAATAGCTCAAGCAACTGAACAAATAGCTAATGAAATATGGGAAGATGATGACATTAAACATCTCATTACATTTTTCATAGATAATAAGGAAACATTTCTAAGTGGCACTACTAAGAAAATCCATTTGTGGGTAGTAGCATGCAAGACAATGTTGTTAGACAAAAAGGCAATATCTTGCGAAGTTAAACTGAAcgaattgaaaaagaaatatgCTCAACTTTGCTTCGAAAAACAAAAAGGATACCCTGTTACATGGCAATTTTTTGATCTTTGTCACAGTGCTTTTCATGATGATGATTACGTAAAAACATTACTCAATGATAATAACCATTCAACAGTAGTTGCTAATATATCAGTACAAAATGTTGTAAATCAAGATGGCATATTTGTTATGAAAAAAGTTGCAACTGAGCAAACTAAAGACGAAAAAGCTGAAGCGATGCTCAAATTATACttgaagtataaaaatatatatcaaaaaagtaGTAACATGCCAAAAGGTATATGGGAGACTATTGCAATGGAACTAGGTGAAGAGGATGTTGTTTATTGGCACAAACGTTTCTTGAATTTCAAACAACATTATGTTAGAATGGCTTGCAAACGGAAAGAAAGTGGCCCAGAAAGTGTAAATTGGCCCTACATGGCACTTTTTGATGAGATGTACGGAAATGATGTTGAATTCCAACAAAAGTTCCTACTCCAAGATGATAATAAAACGGATGTCACACTTTTCTTAGATAACTCAGATAATAATTGGAATGATATGGAAAAGACATTTTTAGTGAAATATTACTTTGATTGTTTCAATGAATTCCAAGATCCTACGATACCAAAAAAGTTTCTGTGGCAAGAAATTGGACGGTTGCTGGATAAAAAAGCTGAGACATGTCAGCAAAAGTATTTCGAATTAAAGAATGCTCATTTTGATACTCTTCTAGAAGGAGGGTATGATTTATCTGAAAGAGTGCCACAAGCTATCATTTTCGACAATACTATAGCTAAAGAAGCCGAAATAGATATTCAGAAAGGAACAGACACCCCTGATATATGGAAAGTCGAACAAGTGGATGAACTTGTACAATTCGCATACAATAATATAGATATGGTGAAAGATAACGTGTGTTATTATGTTTGTTGGGCAACACTCGCAAggaaattatcaaaaaatgtGAAATCTTGTAAGAAACAATGGGACAAATTGACTACATTATATAAATCTGTTTTGGAAGATAAGAAAGAGTATCCAGATATGCAAATAACTTGGAGATATATCGACGTGTTTGATAGGATATTTGATTATGGGATGGACACAAATTTACTAGATGGCTATAAAAAATTTCAGAGAAAAACTGAAAATAATGAGCCAACGAAAATAGGGGCTAAAAGagtaacaataaaaagtaaCGACGACAAATTACTAGAAAACGGTACAGATGATGAAGAGTCATACGATGAAAGGGGTTTTACAAAACGCTCTAAAAAACGTAATGGAGATACGAAAGCCTTTAAAATCTTAGAATACTaccttaaaaataaagacaagTTTATGTCATCGCAACAAAAGAAATTATCCCTATGGGAGGTCTTATCACGACAAATAGGTATAAGTGCAACAGAATGTGCTCATAGATTTCGTAATTTCAAACAAGTTTATACGGGATATGTACAAAGGGAGATTAATAAACCAGAAATGCCTATATTATGGCCTTATTATAGCCTTTGCAAGAAGGTTTTCGGCTACCGGGCTATAAAATCAAAGCTTAAAAACGGTAAAATGGATTCAGATGATGCAGAAGACTGGTCCGCAAAAGAAATCAAACAACTCatcaattatttttcaaaaaactataataatttgattgaaAACGTCGAAGTTAAGAGTAAATGGACCGAATTGGCACTGGAAATGGGAAGATCCGAGACCAGCTGTTGTGATAAATTCCTGGAACTGAGGAAATCTTATAGAAAACTGAAGACGATGAAAGCTCGCAATCCAGATGTGAAGGTTTCGTGGaaatacttcaataaaattgacgatatatataaaaatggtatTAGAAATATTGAGGTTCTTGAAGATATGGAAGTGGAAGATTTGAATGGATATAACGAGGAGCACGACGAAAGTCAGGAGGACGAAGATTACCAATGTATCATTGTAATGCCAGAAGACGAAGACATTAGCAATGCTCAGATCATAATACAAAACAACGTCGAGCAATTCGAAGATATAAAACCCAAAATAGAGAAGCAAATCGTAACGAAATGGAATAGAAGAAGTAAAAGACGCCTTCTAatcttatatatgaaatatatacggACTCACAGACAAGATATAAATCAAAGGGAAATGTGGACAGAGATAGCTTCGCAGCTAGAAGAAAAAACACCGATAACATGtaagaaaatgtttaataaactgaaaaatcaatacaaaattgACAGAGAAAATGATATTCAGACGCCATACAGCGATTTGTTAAAGAAAATACTAGATCTAAAACccaaattcataaaaaaaatactcaatgAAGACCTAGACTCGATAAAAATCTTCAAAAACACACAAATATCGGATGATAAAGTAAACAATGCATTGAAATATTACTTACGAAATCTGGAAGACTTTGTCAGTCCGAAGTTCGAGAAGAAGTATCTATGGACTGAACTCGCTAAATATATAAAGGAgccagttataaaaatatataataaaatcaattatttaaaacagaATTTCAATTCTGAAGTTCAAACGCCTTTTAATGAAATCCTGCATGAGattgtattaaaagaaaatgagtTAAGAGAAGCAATAGGTGACGATCCAAACCTGGGTGTTGAAGAAGATATAATCGAAGAAACTTGGTCTGATATTGAGATTGAACGTCTTCTAACATGGTATCTGGCACATCTGGACAAATTCAAAAACCCAAAATTCGTAAGAAGCTATCTGTGGATGGAGGCTTCTGACATATTGAAAAAGAGTCCACTAGTTTGCTCGAAGAAAATGTTGGAAATGAGATCCCAATACAGGAGTATAGTTAAAGAGAGTCCAGAGGATTTGGAGAATTGGAAATTTTATAATCTGTGCCAAAGGATATATGGAACTGGGAAGAAAATCATCACAAGttgttaa
Protein Sequence
MDQIVVKTEVQPNGDILLFYVDEHQDGVASILEEHHDDGILPDTKYVVEDFVEEDSPDEQEIAQATEQIANEIWEDDDIKHLITFFIDNKETFLSGTTKKIHLWVVACKTMLLDKKAISCEVKLNELKKKYAQLCFEKQKGYPVTWQFFDLCHSAFHDDDYVKTLLNDNNHSTVVANISVQNVVNQDGIFVMKKVATEQTKDEKAEAMLKLYLKYKNIYQKSSNMPKGIWETIAMELGEEDVVYWHKRFLNFKQHYVRMACKRKESGPESVNWPYMALFDEMYGNDVEFQQKFLLQDDNKTDVTLFLDNSDNNWNDMEKTFLVKYYFDCFNEFQDPTIPKKFLWQEIGRLLDKKAETCQQKYFELKNAHFDTLLEGGYDLSERVPQAIIFDNTIAKEAEIDIQKGTDTPDIWKVEQVDELVQFAYNNIDMVKDNVCYYVCWATLARKLSKNVKSCKKQWDKLTTLYKSVLEDKKEYPDMQITWRYIDVFDRIFDYGMDTNLLDGYKKFQRKTENNEPTKIGAKRVTIKSNDDKLLENGTDDEESYDERGFTKRSKKRNGDTKAFKILEYYLKNKDKFMSSQQKKLSLWEVLSRQIGISATECAHRFRNFKQVYTGYVQREINKPEMPILWPYYSLCKKVFGYRAIKSKLKNGKMDSDDAEDWSAKEIKQLINYFSKNYNNLIENVEVKSKWTELALEMGRSETSCCDKFLELRKSYRKLKTMKARNPDVKVSWKYFNKIDDIYKNGIRNIEVLEDMEVEDLNGYNEEHDESQEDEDYQCIIVMPEDEDISNAQIIIQNNVEQFEDIKPKIEKQIVTKWNRRSKRRLLILYMKYIRTHRQDINQREMWTEIASQLEEKTPITCKKMFNKLKNQYKIDRENDIQTPYSDLLKKILDLKPKFIKKILNEDLDSIKIFKNTQISDDKVNNALKYYLRNLEDFVSPKFEKKYLWTELAKYIKEPVIKIYNKINYLKQNFNSEVQTPFNEILHEIVLKENELREAIGDDPNLGVEEDIIEETWSDIEIERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMLEMRSQYRSIVKESPEDLENWKFYNLCQRIYGTGKKIITSC*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-