Ehyp008753.1
Basic Information
- Insect
- Elymnias hypermnestra
- Gene Symbol
- -
- Assembly
- GCA_015832385.1
- Location
- JACTOM010000103.1:383916-389128[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-09 4.1e-06 27.1 0.0 4 38 166 201 163 203 0.94 2 2 5 1.2e+04 -3.3 0.0 32 44 522 534 522 535 0.80
Sequence Information
- Coding Sequence
- atgtgcgAAATATATAAACTATCGAAAACTTTGGACAGGTGCCAGTGTTGTTTTAGTGATGTTGATTTATTGAATATATGGTCGGAATACGAGCGTAATGGCGTACTAGAGATTTACGGTGCTATGCTCCAAGAGTGCTTTGCTATTACGtGGCAGCCATCTGATTTCCCACAGTTGATATGTGCAGAGTGTATAGCTCGGTTACATGATGCGGTTAGTTTCAAAGAGAGGATCCTAGCAACGCAAGAGTTATTTAAagaagGTGTATGCATCATAAATGTTGATGCTGAGGTGAAAATCGAGGAAGAAGAAGAGAGCTATTCACAGCTTGATGAGTTTGAAAGTATTGAATACCTTGATGCTGGTGATCCCGATGAAGaaCTACCCTCTACATCGCAACCTACTACTCCCGAACCGGAGCAAAAGAAGAGGAAGTGGCCCAAGAAAAAAATAAGAAGCGAAAGGAACAAAACCTACAAACAATACACCCAGAAGGCATTAAGAGAGGCGATAGAAGTGGTGAAGAACGGTGACATGACCTGCGTAGGCGCAGCTAAGAAGTACGGGATACCCAAGTACACCCTGAGCATTAAGGTCAACCAGGATGATGACGAAGAAATATCAATAACCACACAGAAGCACTACAAACTGGTAGAAGAACTCCAACAGATCCTCACGTATACAAATGCTATACCTTTCAAGACGAGAACAACCAGATATTACTGTTTCTACTGTTCAACAGATGGGCCAATATTCGAAGAACCAGAAGACCTGAGAAAACACACACAGACCGAACATCTTGATGAtgatatcaatataaaaaacattgagCAGTTCATGAAGCCTCATTGGATGCATGAAATTGTTAAGATAGATGTCGAAGGCCTACATTGCAATGAATGCCTGGAGTTATTACCAGATTGGAATTATATGTTCACACATTTCGCTGAAGCACACTATATAGAGTTCAGCGAAGCTTATACAAGGATAATACCATATGCCTTGACCTCTCAACTCCAGTGTTTCCTATGCCACAAGAGCTTCCATAACTTTGGACATGTCGACAGCCACATGAACAACCATTACAGCAATTACATATGCTACGAGTGTGGTGATACATTCCTAGCAGCTTCCCGCTTGGACAAACATTTAAAAGTGCACAAAGTGGGTAGTTACAAGTGTAAAATGTGTGATAAAGTGTTCTCTTTGGAGAAGTACAGAACGAAGCATTTCAATTTAGTCCACAAACAGGAGTGTTCGAACAAGTGTTTGTATTGTCCGGAGAAGTTTGTCGGGCCATTCCAAAGACATGTACATGTCACGGAGAAGCATAAGGAGAAGGTAAAGATGTACACTTGTGAAATATGCGGCAAAGGTTACACGTGGAAACCTTACTTCCTCGCGCATAAGAGAAGGAAACATGCCACAGAGAAGAATTACAAGTGTGAATTTTGCCCCAAGAAGTTTCTGATGCAGTATGAGCTGAAAGAGCACTCCATAAAGCATACAAACGAGAAGAATTACTTGTGTAAACTCTGCCCCTCTAGTTTTAAGCGGGCTATTTCTTTGAGGAGACACTTGGAAGGGCATGGATATGTTAAGAACTAA
- Protein Sequence
- MCEIYKLSKTLDRCQCCFSDVDLLNIWSEYERNGVLEIYGAMLQECFAITWQPSDFPQLICAECIARLHDAVSFKERILATQELFKEGVCIINVDAEVKIEEEEESYSQLDEFESIEYLDAGDPDEELPSTSQPTTPEPEQKKRKWPKKKIRSERNKTYKQYTQKALREAIEVVKNGDMTCVGAAKKYGIPKYTLSIKVNQDDDEEISITTQKHYKLVEELQQILTYTNAIPFKTRTTRYYCFYCSTDGPIFEEPEDLRKHTQTEHLDDDINIKNIEQFMKPHWMHEIVKIDVEGLHCNECLELLPDWNYMFTHFAEAHYIEFSEAYTRIIPYALTSQLQCFLCHKSFHNFGHVDSHMNNHYSNYICYECGDTFLAASRLDKHLKVHKVGSYKCKMCDKVFSLEKYRTKHFNLVHKQECSNKCLYCPEKFVGPFQRHVHVTEKHKEKVKMYTCEICGKGYTWKPYFLAHKRRKHATEKNYKCEFCPKKFLMQYELKEHSIKHTNEKNYLCKLCPSSFKRAISLRRHLEGHGYVKN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642841;
- 90% Identity
- iTF_00642841;
- 80% Identity
- iTF_00642841;