Ehyp017943.1
Basic Information
- Insect
- Elymnias hypermnestra
- Gene Symbol
- -
- Assembly
- GCA_015832385.1
- Location
- JACTOM010000891.1:2788175-2802006[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 2.6e-08 34.1 0.0 4 39 174 210 171 214 0.89 2 4 2.5e-12 6.1e-09 36.1 0.1 1 39 225 263 225 266 0.94 3 4 6.3e-15 1.5e-11 44.4 0.1 2 45 281 325 280 325 0.96 4 4 4.6e-18 1.1e-14 54.5 0.0 1 42 332 374 332 375 0.95
Sequence Information
- Coding Sequence
- ATGCCAGGATCAGGAAGCTTTCGAGTGAAATGCGAACTGCTTTCAGATGAAGAAGAAAGTAATTCACAATATGCTAATCAAACATTCAGAAGTCAGTTCCCATCCGAGtatttgtcaataaaattaGAACCAAATACACAAATCGACGAGAATGTATCGTCGTCCAACCTTCTACATCAATTGCAGGGTACTCTCGAGGAAATGGCACCGGCACCCGCTGGCCCCGCGGCGACTCCAGTGTGTGAACAGCTTCCCGCGACGTATGACGCGTCGTTTGCAACCCTTGAGCCGGCATCTTGTCCCACTACAATGGGATCATCACTAATAGACAGGCATATAAAAATGATGTGTGCAAATGAAATAGCCGATTCAACAGATTTTGTGCCTTTAATGTCTATCAAAGATGAACCGACATCAGAAGGAGaacAACAGCATTTGAGCAGTGATGACACAAGTGATTCTAATGGCCCACCACAAGAGTTGACAAGCCGCGGCAGTCCAAAGAGCTGGACTCAGCAGGACATGGAAAAGGCTCTCGAGGCTTTAAGGAAACACGACATGAGTCTAACGAAGGCCTCAGCGACTTACGGGATACCTTCAACCACACTCTGGCAGCGAGCACATCGGTTGGGTATTGATACTCCTAAAAAGGAAGGTGCCTCCAAGTCTTGGAGTGAAGATGACCTCCGAGGCGCCCTGCACGCACTGAGGGCTGGTGCAATTTCCGCCAATAAAGCTAGCAAGGCTTATGGTATTCCCAGTAGCACGTTGTATAAAATCGCGCGGCGTGAGGGAATCCGTCTGGCAGCGCCTTTTAACGCAGCGCCGACTGCGTGGCGACGTGCGGACTTGCAGCGCGCACTACACGCGATACGCTGCGGAGCCGCTTCAGTGCAGGCCGCCGCCTCGCAGTACGGCATCCCGACCGgcACTTTATATGGAAGGTGTAAACGAGAAGGTATAGAACTCTCTCGCTCAAATCCCACACCGTGGTCTGAAGACGCCATGGGAGAAGCATTAGAAGCTGTCAGagTTGGTCAAATGTCTATTAACCAAGCAGCGATTCACTTCAACCTGCCGTATTCATCGCTATATGGCCGCTTCAAGCGCTGCAAGTATCAACCTGTCCAGAACCTACAAACAGTACAAAGGGATACACCTTCAAACCCCGAAACTGAACAGCAATCACAAGAAGTGTTTTATCAACAGAGTCAATCCCACAACACACATCCAGAAGAACTACATAACCCGTTTATATGTGACATGGAGACGTCACATTTACAGTACGCGCAGATGTATTACACGCACTGCAACGTTACCAGCTGA
- Protein Sequence
- MPGSGSFRVKCELLSDEEESNSQYANQTFRSQFPSEYLSIKLEPNTQIDENVSSSNLLHQLQGTLEEMAPAPAGPAATPVCEQLPATYDASFATLEPASCPTTMGSSLIDRHIKMMCANEIADSTDFVPLMSIKDEPTSEGEQQHLSSDDTSDSNGPPQELTSRGSPKSWTQQDMEKALEALRKHDMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEDDLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALHAIRCGAASVQAAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQPVQNLQTVQRDTPSNPETEQQSQEVFYQQSQSHNTHPEELHNPFICDMETSHLQYAQMYYTHCNVTS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -