Basic Information

Gene Symbol
-
Assembly
GCA_015832385.1
Location
JACTOM010000077.1:236714-238342[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.028 74 4.5 0.0 38 86 91 135 71 136 0.78
2 5 0.0094 25 6.0 0.1 46 85 191 228 162 230 0.75
3 5 0.0077 20 6.3 0.1 49 83 284 317 266 319 0.81
4 5 0.96 2.5e+03 -0.4 0.0 1 30 360 388 360 389 0.81
5 5 0.0046 12 7.0 0.0 49 83 384 417 381 420 0.83

Sequence Information

Coding Sequence
ATGGAAGTTAATAATCCCCAAAGTTATTGGTTTGTAGTAAGAGAAGACCAAAGCAATGTAATATTTAGTAGTAATAATTTTACGATACAAACACCGCAAAGACAAGAAACAAGATACATTGTAGAACCTTCAGTTGATAACCAGCAGTACCTTCACGGAGATCATGTACAGCCAGAACGAGATGAAACCGCAAAGTCTTGTGCCAAGGAAATTGAAATGCAAAAGGAGGATAACTTTTGGGatagaaataaagtaaaattgttactAACCCATTGTCTAGAAAACAGGTATGGATTTAAAGATAAAACGTCGTGGAATGAGATATCTATGCTGCTTGGAACAACTTCAGATGAGTGTGACAGGAAGTATAGAAATCTCCGAAGAACCTACATTAGATTGTTAAAAAAGAAACGATTAGGTAAAGATATAAAATGGatacattacaatatttgtGATGAAGTGTTCAAGGATTGTAAGTCTTTATCTCTGGCCATGCTGGCTCCTTGGGAAGATGCAAAAGTTCGAAGGCTCTTGAATCTTTATATTGAAAACATAAATAGGTTTCATAGCTCTGAATACTTGCAGAAAGATGTATGGAGGGACATAGCTATGCAATTAAATACTACAGAATACAATTGTTATCATAAGTTTCGAAATCTAAAAAGAACCTATTTTAACTGGATTGAAAGAAGTCGTGAATCtggaaaattaataaagtggccCTACCATCATTACTTTGAAAGAATATACTACAACTACAACCCTGATTTGGGTCCATGGGATAGAACTAAAATTAGGCAGCTCATAAATGCATATTCAGATGTTGCTCATAAGTTTCGGAACCCAAAATATCAGAAAAAAGAACTGTGGAAAGAAATATCAAGAAAAATAGGTGAATCACCTAGCAATTGTGATAGAAAATTTCGAAATCTAAAACAGACATATGTCAGATTAAAAGTGAGAGCAGACTGTGGCAGATCCATAACCAAGTGGaggtattttaaagattttgtgtCAATATTCGAAAATAACTCTTATAATACAGAAGAACATGGGGGAGAGGTTTCATTTAAATCTCAGGAGCAAAATTATATCAAGAAATTGTTAACATTTTACATAGATAATAAGCAGAAGTTTATTGATCCACTTGTCAAAAAGAGAACCTTGTGGAAACAAATCGGTCCAAAGTTGGGTTTGTCACCTGAAGTATGTGACAAAAAGTTTCGCAATTTAAAACAGACCTACATCAGACTAGCAGAAAAGAAGAGAGACACTGGGAAAGACAATGGCTGGCCTTATTTCTCTTATTTTGAAGAAATATATGATGGATCAAAAATATTCACAAACAACTGTGTTCATAAATGTAGTGCTGGTGGTCCCGCCTTCTCAGAAATAAAAACGCTTGTGAAAGAATATGACACTAATGACAAGGATAAATTTGAGAAACTTGTTAGGGCTATAGAAGAGTCAAATGGTATTCAACGTGAAAGAAACCAAATATTATATGCCCTCCTGAACAGGCCCTAG
Protein Sequence
MEVNNPQSYWFVVREDQSNVIFSSNNFTIQTPQRQETRYIVEPSVDNQQYLHGDHVQPERDETAKSCAKEIEMQKEDNFWDRNKVKLLLTHCLENRYGFKDKTSWNEISMLLGTTSDECDRKYRNLRRTYIRLLKKKRLGKDIKWIHYNICDEVFKDCKSLSLAMLAPWEDAKVRRLLNLYIENINRFHSSEYLQKDVWRDIAMQLNTTEYNCYHKFRNLKRTYFNWIERSRESGKLIKWPYHHYFERIYYNYNPDLGPWDRTKIRQLINAYSDVAHKFRNPKYQKKELWKEISRKIGESPSNCDRKFRNLKQTYVRLKVRADCGRSITKWRYFKDFVSIFENNSYNTEEHGGEVSFKSQEQNYIKKLLTFYIDNKQKFIDPLVKKRTLWKQIGPKLGLSPEVCDKKFRNLKQTYIRLAEKKRDTGKDNGWPYFSYFEEIYDGSKIFTNNCVHKCSAGGPAFSEIKTLVKEYDTNDKDKFEKLVRAIEESNGIQRERNQILYALLNRP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-