Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.00025 1.3 9.6 0.0 16 32 15 31 7 34 0.82

2 4 0.074 3.7e+02 1.8 0.1 17 27 51 60 48 65 0.73

3 4 0.0045 22 5.7 0.3 18 30 86 97 81 101 0.78

4 4 0.0032 16 6.1 0.0 16 27 149 159 146 162 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.00025	1.3	9.6	0.0	16	32	15	31	7	34	0.82
2	4	0.074	3.7e+02	1.8	0.1	17	27	51	60	48	65	0.73
3	4	0.0045	22	5.7	0.3	18	30	86	97	81	101	0.78
4	4	0.0032	16	6.1	0.0	16	27	149	159	146	162	0.84

Coding Sequence: ATGCGAAAAGACTACCTTAAAACGCATATGAAGACGCACGACGACTCTCAAAAAGGTCATCTTTGTGAGATTTGTGGAACGTACTTTTTGTCGAAAAGCGAATTCGGCAAACATAAATTAGAACACATTAATTCTGTGATGCAAAATGAAGAAGAAGAAGTTCTTTGTGAGTTTTGTGGTGGTTTGTTTTCATCAGGGAGCGATGAATTCGAGGCTCATAAACTGCTACACATTAATCCCGAGTTGCAAAATGAAGGAGGAGAACTATGCGAGACTTGTGGATGCTTCTTTTCAACAGCTAGCGAATTCGACAAACATAAGAAACTAGTCCACATTAATGCTGGTTCATTAAAAAAGAATAATCGACAGTCGCCCACACCATCAACTAGCTGCAACACCGTTCCATCAACTAGCCGCAACGCCGCCCCATCAACTAGCAAAGTAGGAGATGGATCAAAAATGTGTGAAGCCTGCTTGGTGAAGGTTCCCCCTAATAAATAG
Protein Sequence: MRKDYLKTHMKTHDDSQKGHLCEICGTYFLSKSEFGKHKLEHINSVMQNEEEEVLCEFCGGLFSSGSDEFEAHKLLHINPELQNEGGELCETCGCFFSTASEFDKHKKLVHINAGSLKKNNRQSPTPSTSCNTVPSTSRNAAPSTSKVGDGSKMCEACLVKVPPNK

Sequence clustering based on sequence similarity using MMseqs2