Basic Information

Insect: Elmis aenea
Gene Symbol: -
Assembly: GCA_947652605.1
Location: OX393580.1:24026600-24028797[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.3 1.7e+02 3.9 2.7 3 23 130 150 130 150 0.98

2 13 0.0058 0.77 11.3 4.1 1 20 269 288 269 290 0.95

3 13 0.0028 0.36 12.3 1.0 3 23 313 333 312 333 0.95

4 13 0.015 1.9 10.0 0.6 1 19 350 368 350 373 0.90

5 13 0.093 12 7.5 0.3 2 20 382 400 381 405 0.90

6 13 0.088 12 7.5 0.0 1 23 416 438 416 438 0.94

7 13 0.0041 0.54 11.7 1.6 1 23 443 465 443 465 0.99

8 13 0.0063 0.82 11.2 2.7 1 21 470 490 470 493 0.95

9 13 0.00013 0.017 16.4 0.2 1 23 499 521 499 521 0.96

10 13 1.2e-05 0.0015 19.8 1.2 1 23 527 549 527 549 0.99

11 13 4.9e-05 0.0064 17.8 2.3 1 23 555 579 555 579 0.99

12 13 0.0068 0.89 11.0 6.0 1 23 585 607 585 607 0.96

13 13 0.00069 0.091 14.2 6.2 1 23 613 635 613 635 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.3	1.7e+02	3.9	2.7	3	23	130	150	130	150	0.98
2	13	0.0058	0.77	11.3	4.1	1	20	269	288	269	290	0.95
3	13	0.0028	0.36	12.3	1.0	3	23	313	333	312	333	0.95
4	13	0.015	1.9	10.0	0.6	1	19	350	368	350	373	0.90
5	13	0.093	12	7.5	0.3	2	20	382	400	381	405	0.90
6	13	0.088	12	7.5	0.0	1	23	416	438	416	438	0.94
7	13	0.0041	0.54	11.7	1.6	1	23	443	465	443	465	0.99
8	13	0.0063	0.82	11.2	2.7	1	21	470	490	470	493	0.95
9	13	0.00013	0.017	16.4	0.2	1	23	499	521	499	521	0.96
10	13	1.2e-05	0.0015	19.8	1.2	1	23	527	549	527	549	0.99
11	13	4.9e-05	0.0064	17.8	2.3	1	23	555	579	555	579	0.99
12	13	0.0068	0.89	11.0	6.0	1	23	585	607	585	607	0.96
13	13	0.00069	0.091	14.2	6.2	1	23	613	635	613	635	0.95

Sequence Information

Coding Sequence: ATGGAAACAGTTACTCAAATACCTGAGGACATTAATAAAGTTTGCAGAACTTGCATGTCGATTGCACGTGATGGGAGTTACAACATGGTAGTGAAGAATGAAAACTCTCAATTGATTTTAATGATGCAGGAAATTACTTCATTGAAGATATCTGTCAACGATGGATTACCTCAAACAATGTGTGATAGCTGTATTTCACTGTTAAACTTGTCGTACAAATTTAAAAAGCAGTGTGAAGATGTCAACCTTAAGTTACGGGAAATGTTGTCTAGCAACACTACTTCCGACAAAAAGCTACTTAAAAATGAATCAACTCATGTACCAGCCCTTTCAAATGCAATTTCAGATGTTGAAAATATTTGTAAAAACAGAGCAATTACATTAGGATGCTCATCTTGCAACGCTCATTATAACAGTTTCTACAATATAAGCAAGCATTTAATTAAACACAATGACAATAAAACTCTCTTGGAAAGGTACTGCAGTAATCGATGTATTGCACCGCTAAAGGGACCAATGAATGATGTAGAGGATTCCTTAAGCAAATATAATTTGAAGCTTGTTGAAGAACGAAAAGTTTCGAAGCAAAAAGTTTTGATTGAAAGTAGTGCTTCGCATGATCTCATGAGTAGAATAAAAGTGGAAAATGACTGTGTTGATGACAGCCAAATTGAATTTGAATTTTCAGCTGATGAAATCACAAATGTACTGACTGAAAATTATGATTTACGTGTTCCATCTACGACGCAAAATGTTAAAACGCCTTCTCCGAAAAATGAGAATGAAAAGAATCACAACAAAACATTCCAGTGCAAAGGGTGCAGTGAGCACTTCACCACCCGGTATCGTTTAAAAATGCATACATGTGCAGCAAGTAAAAGCAAACAGTTTGAGAAAGAAAATTCGTGTGAAGAGGACAAGGAAGCTTCCAAAATATGTGATTTATGTGATAAAACATTTTCAAACAATCTGCTTTTCTCTTTGCATTTCTTAAAACACGGTTTAATCGCCGAAACCAAAGTAAACCCGCACATTTTTTCTGAATATTTCTTCTGCGAAATTTGCGGGCAAACCGTCGAATCCAATGATGAATTAATTGAGCATTGCCAAGAAAAACACAAAGATGAATCTGATCTGAGCTGGACATGTTATAAATGCAAGTTAACGTTTGTGTCTGAAATCGAACTGTTGGAACACCATGAAGGCCTTGAACATATTTTCGAAGACAGCATCTCCAAGGATAGTTACTCGTGTGCTTTGTGTGCGGAAGTCTTCTCCACCAAAGAGATTTTAATCGAACACCTGGTGAATCACATCATGAAAAAATTTCAGTGCCGTTTATGCCCGACGAATTTTGCAACGCAGATCGCTTGTAATGTCCATATGAAAACTCACCCGAACTACAACCATAAGTGCAATATCTGTGGGAAGTATTTGTCAAGCAGAAACGCGGTGCGATCgcatataagatgcgtgcacaccgacgaactcccttacgtgtgtgccacgtgcggtaaacgattcaaaacggcaggccgactctcgatccacaaagacattcacagcgaacacaaaaagtatgtttgttcgtattgcgggtactcgtctcataaaagcggggacttacaaatacacatccgaacccacacagaggaacgcccttacaagtgcacatttgcAAACTGTAGTGGGGCTTTTAAAACGTCCAGCCACCTGAACGAACATATTCGTCGACATTTACAAATTAGAAAacacgagtgcaacgtttgtcaaacggtttttggtcataaacatactttgaaactacataaaatgctgcatacgggggagaagcctttttcttgtattatatgtaaaacgaattttcgtcgtaagcatcacttacaagcccatatgaaacagcataatggaCCTAAAGTTCAAAAAGATGCAGATGACCCTAATGAAATTTTAGTACAGCTTTGA
Protein Sequence: METVTQIPEDINKVCRTCMSIARDGSYNMVVKNENSQLILMMQEITSLKISVNDGLPQTMCDSCISLLNLSYKFKKQCEDVNLKLREMLSSNTTSDKKLLKNESTHVPALSNAISDVENICKNRAITLGCSSCNAHYNSFYNISKHLIKHNDNKTLLERYCSNRCIAPLKGPMNDVEDSLSKYNLKLVEERKVSKQKVLIESSASHDLMSRIKVENDCVDDSQIEFEFSADEITNVLTENYDLRVPSTTQNVKTPSPKNENEKNHNKTFQCKGCSEHFTTRYRLKMHTCAASKSKQFEKENSCEEDKEASKICDLCDKTFSNNLLFSLHFLKHGLIAETKVNPHIFSEYFFCEICGQTVESNDELIEHCQEKHKDESDLSWTCYKCKLTFVSEIELLEHHEGLEHIFEDSISKDSYSCALCAEVFSTKEILIEHLVNHIMKKFQCRLCPTNFATQIACNVHMKTHPNYNHKCNICGKYLSSRNAVRSHIRCVHTDELPYVCATCGKRFKTAGRLSIHKDIHSEHKKYVCSYCGYSSHKSGDLQIHIRTHTEERPYKCTFANCSGAFKTSSHLNEHIRRHLQIRKHECNVCQTVFGHKHTLKLHKMLHTGEKPFSCIICKTNFRRKHHLQAHMKQHNGPKVQKDADDPNEILVQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -