Eaen000406.1
Basic Information
- Insect
- Elmis aenea
- Gene Symbol
- Zfpm1
- Assembly
- GCA_947652605.1
- Location
- OX393576.1:3786274-3789423[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 5.7 7.5e+02 1.8 0.1 2 23 8 29 7 29 0.90 2 14 0.38 50 5.5 3.4 1 23 552 575 552 575 0.86 3 14 0.035 4.6 8.8 0.7 1 23 668 691 668 691 0.92 4 14 0.0034 0.44 12.0 1.2 1 23 699 721 699 721 0.98 5 14 0.00022 0.029 15.7 2.3 2 23 724 745 723 745 0.97 6 14 1.6 2e+02 3.6 2.4 1 10 751 760 751 773 0.82 7 14 1.6e-05 0.0021 19.3 3.2 2 23 780 802 779 802 0.96 8 14 0.00028 0.037 15.4 4.6 2 23 839 861 838 861 0.96 9 14 0.21 27 6.4 0.0 2 23 877 897 876 897 0.96 10 14 0.00011 0.015 16.7 1.3 1 20 903 922 903 925 0.92 11 14 0.001 0.13 13.6 0.2 1 23 933 955 933 955 0.98 12 14 0.00035 0.045 15.1 3.5 1 23 961 983 961 983 0.98 13 14 3.3e-07 4.4e-05 24.6 3.5 1 23 989 1011 989 1011 0.98 14 14 0.00052 0.068 14.6 7.3 1 23 1017 1039 1017 1040 0.96
Sequence Information
- Coding Sequence
- ATGGATTCTGATAATAACACCGTTTGTCCAGTTTGCACGTTGTACCTAAGACCTGGTATAACGTTAAAGTCTCATTTAGCTAGTCATCCTAAACAGAAAGTCATTGAAGCATTAGTTCGACTTTCTAGCAATGGATTGACTCCTAAAGACATTGCAATAGCAAATTCAGAGCCACAGGATGATTATCCGCAACGTTCATCAAATGTTAATGGGTCATGGAATCAGGGAAATCCAATGTTGGTTAATGGGGCACCACCGGGTTTTAGTTCAATGTCGAGTAATCATTCGTTCATCTACCATCAGTTTATGAGCACGTCCAGTCAACAACAATCGAACTATGTAAACCCAATGTCTCAGCAATATGTTACCATTCCTACTGTTATTAACCCTCAAATGATGTGCCAACCATACATGTATCAACAACAGCAACATGTAATAATGGCTGGAGGGCCATCTGTAACACCATTGACCTCGAAATCTATCGAGTCATCGAAAGAGTCACCTTTTTTAAATCAACAGCGACAATCTTCAGTTTCCGTATCGACTTGTACTGATTCCAAAAGTGATGATATTACTATTGTAGAAGATATTATTGAAGATGATGTCCTTGATCACGATGACGATATTGCTCAAGAAGATAGTACAGTAATAATTAATGACTTTGGACAAAACAAATTTGCTACCCAAACTGAAGAAAAAGAAGAGGAGGACGATGGCCAAATGTTGGCGTTAGACTCACCAGATGATGTCAATAGAGATATAAACGAGGAAGTATGTGATAAAATTACAATTACGGAAGTAGATACGTCTGATGATCAATTACCCAAGTCTCACAAAGAGTTGCAAGAGTATCAGGAATCTGATGATACCATGGGGTCACCGTCTAGTGTTAGTTCGGATTATCATTTGCGAGTTAGAACTGATTTAAGCAAAGCGTGCCAGACACAACAACTATCTGGTAGCGTTTCCCGACCAGAATCACCTAGAAGTCTTAGTGTTATGAATGTGCAGATTGTTGAAAATCATTTTGAAGAACCGTTCTATCTCGATTCCGAATCTATACATCCTGTAGTGGCAACAAGCACAAATAATTCAGATACAATTGCTACCGTCTATGCTCCAGCTAATAGTTCTATGCCTCAACAAAATCAGCTTATCGATTTGGATGGTATGCAATTAATGTTGCCAGGAGATTTCATGTCTGGTCAGTTGATATCGCAAGTAGAAGATTTCGAATGCATCAACAGTCGTTCTGATAGAAGAGTCTTGATGACATTAGGAGGAATAGATGGAGCCAGGGAATCATTTGTCGATCAAAGAGAGTTTGATCGCTTGGGTGAGGAAACGATGTCACGCGAAAGCACTAATGTGAGCATTCGAGCAGACGAGCGTATGCCACCAAGAGGTGAACTGTCAGGGCAAGAAAGTAACGGTGCCACTAGTGATCTCACCTGGTCTCGAGTTCAGTATCACGAAGGCAGTTCAGGAATGTCTACTTCTTACGACTTTTTAGCTCGTGAAACATGGGAAGGTTCGGACGGTTCCGACTCTGAAGCACCACCATTACAAAGTCGAATTCCTCTCCAAGGTCGCTACTCGCCCGATTTGGATGACACACCAACGATAGTAAGCGTTATAGAACCACCTTTAAATTTCAAATGCTCCATATGTGGCGAAGGTTTTACATGTCCAAAAGAACGTCGAGTACATCATAGTGAAAAGCATCCAGAAAAATCAAACAGTATTAAAACAAAAGGCACTGGTAACGTCGTAGGTTCCAAATTAGGTAGCAAACGAGTGAAGAAAATCGTTATAAAACCGAAATCAACTGAAATTAAGGCAGAAACTAATTTTGATAATGTTTTTACGAATAAATTAAAATTTGAGACAAACAGCGACGGTAACATCACCAGAGACCCAGATATGCCTTTGCCGAAAATTAGCGAAGGCGAGCTGAAGAGTTGTGAATTGAGCGAAAAAATTATCAAAGGTGATTTGGCTTACGTGTGTTCTGTGTGTAACTGTGTTTCGCCAAATCTTAAATTGTTAAAACAACACAAACTAGATGCTCATAATATATCGTCCGAAATACGGTACAAATGCGCGACCTGTGATGTGACGTTCCACAAAGAGGGCCAGTTCACAGAACATTTACTCATACATccgttggaatgtcgtttgtgtggcaaatatttcttccgtcgacaaaacatgcaattacacatgaagcgccatctgggtatcaagccattcaagtgcaacttctgcgaaaaatcgtttttaacgaaacaaaagcacgacgaacataagaacatccataccggcgaggcgcccatcaaatgctccatgtgcgacgagacttttaGACGACACTCGAATTTAGTACAGCATCGGAATCGTTATCATCTGAATGTGAAGAGGAAAATCAAAGATTACATCTGTTTTTGCGGCGATATATTCCATTCCAAAAAGAAGCTCGCTTGGCACAAAGAAATACACGATGCCAAACCGAAATCTTGCACTCATTGCAGCGAAAAGTTCATACACATGGCGAGTTTAACTCGACATATGAGACGTGCTCACAATGAGCGATTCGTTCCTAAAGAGGAAAGGAACAATGAGAACGTAGAGTGCCCCATCTGTAAAGGCGTGTATCTGCGATCGTCTTTGGATGTTCACATTAGGAATCACAGTGGACAGAAGCCTTACACCTGTTTAATTTGCAACAAAGACTTCACGACAAAGTGGAATCTTAAATTGCACAAATGGACTCACGCCGCGAGAACCTCAAAGCCGTTCCGATGTGATCAATGCAAGGGGGCTTTTATTCGAGAAACGGACTATGTGGCCCACATGAATTCCCACAAAAGTGTACGTCCTTATACATGCAATTACTGTGGGGCCCAGTTTATTCGCAAGTATAATTGTCAgcggcacgtacgcgagcacgaacggggtaaaacgttctcgtgtcaaatttgcggcaaaagctttcatcggtcgtattatcttaaagatcacatgcgggttcatagtggacttcgaccttattcttgtcatatttgcggtaaaacctcaacgacTAAATCCAATCATAATAAACATGTACGCATCCATCATGCTAGAGAACCAATTAGTACTGAAAATTAA
- Protein Sequence
- MDSDNNTVCPVCTLYLRPGITLKSHLASHPKQKVIEALVRLSSNGLTPKDIAIANSEPQDDYPQRSSNVNGSWNQGNPMLVNGAPPGFSSMSSNHSFIYHQFMSTSSQQQSNYVNPMSQQYVTIPTVINPQMMCQPYMYQQQQHVIMAGGPSVTPLTSKSIESSKESPFLNQQRQSSVSVSTCTDSKSDDITIVEDIIEDDVLDHDDDIAQEDSTVIINDFGQNKFATQTEEKEEEDDGQMLALDSPDDVNRDINEEVCDKITITEVDTSDDQLPKSHKELQEYQESDDTMGSPSSVSSDYHLRVRTDLSKACQTQQLSGSVSRPESPRSLSVMNVQIVENHFEEPFYLDSESIHPVVATSTNNSDTIATVYAPANSSMPQQNQLIDLDGMQLMLPGDFMSGQLISQVEDFECINSRSDRRVLMTLGGIDGARESFVDQREFDRLGEETMSRESTNVSIRADERMPPRGELSGQESNGATSDLTWSRVQYHEGSSGMSTSYDFLARETWEGSDGSDSEAPPLQSRIPLQGRYSPDLDDTPTIVSVIEPPLNFKCSICGEGFTCPKERRVHHSEKHPEKSNSIKTKGTGNVVGSKLGSKRVKKIVIKPKSTEIKAETNFDNVFTNKLKFETNSDGNITRDPDMPLPKISEGELKSCELSEKIIKGDLAYVCSVCNCVSPNLKLLKQHKLDAHNISSEIRYKCATCDVTFHKEGQFTEHLLIHPLECRLCGKYFFRRQNMQLHMKRHLGIKPFKCNFCEKSFLTKQKHDEHKNIHTGEAPIKCSMCDETFRRHSNLVQHRNRYHLNVKRKIKDYICFCGDIFHSKKKLAWHKEIHDAKPKSCTHCSEKFIHMASLTRHMRRAHNERFVPKEERNNENVECPICKGVYLRSSLDVHIRNHSGQKPYTCLICNKDFTTKWNLKLHKWTHAARTSKPFRCDQCKGAFIRETDYVAHMNSHKSVRPYTCNYCGAQFIRKYNCQRHVREHERGKTFSCQICGKSFHRSYYLKDHMRVHSGLRPYSCHICGKTSTTKSNHNKHVRIHHAREPISTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -