Basic Information

Insect: Elmis aenea
Gene Symbol: RREB1_1
Assembly: GCA_947652605.1
Location: OX393578.1:58681002-58686881[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00079 0.1 14.0 1.1 1 23 66 88 66 88 0.96

2 16 0.02 2.7 9.5 1.4 1 23 101 123 101 123 0.98

3 16 5.6e-06 0.00073 20.8 4.3 1 23 129 151 129 151 0.99

4 16 4.3 5.6e+02 2.2 0.1 1 20 229 249 229 253 0.68

5 16 0.00027 0.035 15.5 1.9 2 23 259 281 259 281 0.97

6 16 0.055 7.2 8.2 0.9 1 21 331 351 331 352 0.94

7 16 0.07 9.2 7.9 0.1 1 23 491 513 491 513 0.96

8 16 7.9e-06 0.001 20.3 0.8 1 23 522 544 522 544 0.99

9 16 0.00081 0.11 14.0 3.1 1 23 550 573 550 573 0.97

10 16 0.00069 0.091 14.2 2.8 1 23 996 1019 996 1019 0.96

11 16 0.0011 0.14 13.6 0.4 2 23 1273 1294 1272 1294 0.97

12 16 0.12 16 7.1 6.3 1 23 1300 1323 1300 1323 0.97

13 16 0.041 5.4 8.6 1.1 1 20 1352 1372 1352 1373 0.94

14 16 0.035 4.6 8.8 1.6 1 23 1441 1464 1441 1464 0.94

15 16 0.016 2.1 9.9 0.4 3 23 1512 1532 1510 1532 0.93

16 16 0.0072 0.95 11.0 7.8 1 23 1538 1560 1538 1560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00079	0.1	14.0	1.1	1	23	66	88	66	88	0.96
2	16	0.02	2.7	9.5	1.4	1	23	101	123	101	123	0.98
3	16	5.6e-06	0.00073	20.8	4.3	1	23	129	151	129	151	0.99
4	16	4.3	5.6e+02	2.2	0.1	1	20	229	249	229	253	0.68
5	16	0.00027	0.035	15.5	1.9	2	23	259	281	259	281	0.97
6	16	0.055	7.2	8.2	0.9	1	21	331	351	331	352	0.94
7	16	0.07	9.2	7.9	0.1	1	23	491	513	491	513	0.96
8	16	7.9e-06	0.001	20.3	0.8	1	23	522	544	522	544	0.99
9	16	0.00081	0.11	14.0	3.1	1	23	550	573	550	573	0.97
10	16	0.00069	0.091	14.2	2.8	1	23	996	1019	996	1019	0.96
11	16	0.0011	0.14	13.6	0.4	2	23	1273	1294	1272	1294	0.97
12	16	0.12	16	7.1	6.3	1	23	1300	1323	1300	1323	0.97
13	16	0.041	5.4	8.6	1.1	1	20	1352	1372	1352	1373	0.94
14	16	0.035	4.6	8.8	1.6	1	23	1441	1464	1441	1464	0.94
15	16	0.016	2.1	9.9	0.4	3	23	1512	1532	1510	1532	0.93
16	16	0.0072	0.95	11.0	7.8	1	23	1538	1560	1538	1560	0.98

Sequence Information

Coding Sequence: ATGGAATTACCCTCAGACAACACTGAACTACTTGCCAAAGAAAACTCAATAAACCAAAGCAACCGAAGTGACTCAGGTATATTTTCCGCTACAGGAAACTCCACCAATACTAGTGACGAACATATGGACAATACAAACCATTCCGAAAGTGGAGAAACCGACAACCACAGCAACTGCAGTTCACCAGATCGAAAATTTCTGTGCCCAATCTGCGAAACGATGCTAACATCCCAACACGAATTCACTTTGCACATCCGTTCGCATAACAACGAGAATGAAGCGCAAGACAACGAGAAGGGCTTCACTTGCCGAATCTGCTGCAAAGTTTTGAGTTCCAGTTCTAGTTTAGACAGACACGTGCTAGTCCACAGCGGCGAACGCCCGTTTACTTGCAAATATTGCGGTGATACTTTTACAACGAATGGAAATATGCACAGGCATATGCGTACGCATTCACACAGAAACGAAAATTACGAATCAGACGAGAGCACGGACAGCAGCGCCAGCGAACATTCGAAAAGTGTAGAGTTTAACAACAATAAAATCAGTGCAAAGTTTGATGGCGAGGAGAAACTGGTGGAGGACAACCATATTTCCGAAAACAAGCGCAAATGTTACGATGAGGAAGACCACAAACCTCGAATTAAAGTGCGCAAATTGTATAACAACGATAGAACCAAAACTTATAAGTGCCCCGTTTGTGAACGCGATGATTTTACCTCGCTTGATGCTCTTGACATGCACTTAGAAGACAACCACACCGATTACCCGGCAAAATGCCATATTTGCAACGTCGTTTTCAAAAACAACAAGCTCCTCAGCGTCCACAGATCTACGGCACACTCCTCAGACGATGCAGTCAGAAATTTGAAGAACTCCATAGTGGGTTTCAAAGATTTAACATTCGTCGACTTCTCAAGCCAAAAATTTCCACACATCGCACGTTACGAATGCGAGAAAAACCTGCACAAAGCCTCGAGCGGTTTGAAATTCCAGTGCGAAAAATGCAGTCGCGCTTTTCCATGCGCCAGCTCGCTCGAAATCCACCATATGGATTGCATTTCCGGATTGGACCTCTCCACGAACAAGAACCTGCTGGACCTGACGAAAAACAACCACTTTTCCGAGAAGGAAATCCGTCGTGCAGACTTCTTCGCCCGTCTTGACTTACAAAACAAATTGAGCGAAAAAGCAGAACAGCCAATGCAGATGCCCGAAGCCCCCACGAAGCTACAACAACGCTTGCTGCAAAGCGTCGATGGCGGTAAAGATTTGGCCGACATCCAGTCGATAATCTCGCTAACAACGAACGGCAGCCTGCTGCAACAACTGCAAGGAAAAACCAGCGAAATGGTCGCGGCCCCACAGAAGCACTTCCCCGAAATCCAGCCCGAAACGAAACACGAGAACGAAGAAGAGTCGCAGGATCTATTCGCGGCCGAGTTTCGGAAAATGAAATTGCGCGGCGAGTTTCCTTGCCGCCTGTGCACCGCCGTTTTCCCGAATTTACGAGCACTGAAAGGGCACAATCGGGCCCATTTAAACGGCAACAATAACGGCACATACAGGTGCAACATGTGCCCCCATTCTTCAATCGACAAAGCTGCTCTTATTCGACACATGCGCACCCATAACGGAGACCGACCATACGAGTGCTCCTTGTGCAATTACGCGTTTACAACCAAAGCCAACTGCGAGCGACACTTGCGCAACAGGCATGCAAAAACGACCAGAGAGGAAGTCAAAAAATCAATAATTTACCACCCAACTGAAGATCCGAGTAACGACGAGATCAGCAAATTGGTAGCAAGAGAAGAAAAGAAAATAAACACTTCTTTGGAAATAAACGACAACAGTTCAGAAAAAATACGTTGCTCAACTCCTAAATCTTTTCCGACAACTCCGGAGATATTAAAAACGCCTGAGAAACACCACGTTTCTCCTTACAAAGAACTAATCACTCCAAAAATTTCAATTTCCGCGAATTTATTAGCTTTAAAAGACTTAAGCACACCCAAAGATTACACCAACAACTTTAAGAGCCTAAATGATGTTAGCAACGACAGTTTAAGGCCAATTAAAGAGCAAAGGATTATGATGAGCGAACAGTTTTCGCCTTACAGCGCACCTTCGTTCAATTTCTCACCAAAAAATACAAACTCTTCAACCCCCCATCATCTTATACCGAAAATCCAGGTGGACATTCCGAAGCAAGTCGTGGAATACGAGAACAATTTGAAAGAGGAATATGACGCGAATGATGAGGACCAACCTTTGAATTTGGTGCTGGATTTGAGCAAAAAGAAAACGGAAAAGAACCTTGAAATCGATATAAAACCAAAACTGGAAGAAGTTCCTCAAGATCTTACCAAAAAGAGCTGTGATATAGTGTCGCCACACAGCATGAATGAGATTCTAGCTCAACAGTTGTTGAAGAATACTCCGAAAATTGATCCGGCTAGTCTGTATGCGTCGCAGTTGGCTTTTTACAGGAACGGTTTTACGGGACTCCCCGGTTTGCCTAACTGGTCGTTTCCTCTAAATCCGTTGCTGTTCCCAGGGATGCCAAATCCGTTGCTACCCCAAGATCCACAAGAAATCAAAGAACGCCTGCAAAGGCTGCAGTTATGTGGTGGCGGCATGATCATGGATAACTTCGCAGAACGCCTAAAAAACTTCCACCAACACTCACTCAATTCCAACAACTTAAACGCTTTTAATAACATGAAACTGAACGACCACAAATCCGAAATAAACTTCCAGGAGATGAACTATTCGCCTTCAAAATCGATCAAGTCGGAAGATTTAAAACCGCTCACGTTAAACATAGACCAGAATTTTACCGATAACTTAACGAAACTGCATAGTCCATTATCTCAACCAAAATCTGAAATGATGCAATCTCCTAATTCCGTTAAAATGGTCATCAAAAACGGTGTCCTCATGCCAAAACAGAAGCAGCGTCGTTACCGTACCGAACGACCGTTCTCTTGCGAACACTGCTCGGCAAGATTTACCCTAAGATCCAACATGGAGCGCCACATTAAGCAACAACACCCTCAATTTTGGTCGCAGAGACAAAGATCCAACATCGGAAGCGTCAATCGCAAAAACCAGACGGGCCATGTTACGCCAAAAAATAACTTTTGTAACATAAATATCCCGAATTACGACACGCCAAAGAGTCAACACTACGAAGAAACCAAAGATAATCAGATATCTGACAAAATCAAATACGCCATTCTAGCTCAACACTTGAAAACCGCAAGAAATTTCAACAACACCTACAACCACGACCCGAAACCCAAAGAAGATGACGACGACTGCGCGTTAGTAATTGACGAAAACGACGAAATCTTAAATAGGAATAATGATAAGACTGATAATGAAAAAAATATGACTGCTATGAACGACTCGTGTAATGACATTAACTATGACACGGTCTGTAGAACTCGAATTTTAGAAGAAAAGCTAAGGCAGTTACATGCCAAACAGCAGCTGAACGAAAAATCAAAAACAAACTCAGTTCCTTCGGCTAATTTTAACAAGCACGACGAACCCCAGGACCTCGTACCAGTGTCCCGCCTCTTAGATAACGCTTCGCAACAACAATTCAAGGAATATTTTCGTAGAGATGGAGAGGAACGAGAAGTTGAAGGTATTAGCGAAGAAGATGAAGAGGGTTTGGTAGCCAGCTGCAGCACTAGCGAAGGGAACAATTCAGGAACTGATGAAAATCGATCTGAATCTGAAAACACAACAACCCAACTCCCAGTAAAAAAGAAATCGGCATATTCCTTGGCCCCGAATCGTGTGAGCTGTCCCTATTGTCAACGCAAATTTCCGTGGACTTCCTCTTTGAGAAGACACGTTCTCACACACACGGGCCAGAAGCCCTTCAAATGCAGCCACTGTCCTCTGCTCTTCACCACGAAATCAAACTGCGACCGCCATCTACTCCGCAAGCACGGAAACGCAGCGGTGACAATCAACAACGATTCGACCAACAACAACAATTCCAACTACCTGATGCGAAACGTCCCGGAACGGCCCTTCAAATGTTCGAGCTGTCCCAGCAGCACGTTCTCCACGTACTCCAACCTCAAGAAACACATCAGCTGCAAGCATTTGGCGCAGGGGGCCCAAAGCGACGACGCCCGATCTCAAGTATCGACCGGCTACGAAGCCGGCAGTTCGGAGGACGAAAAAATGCCGACGAACGAACAGAAAACCGATTGGGACAAGCAGGTATCTCACAATAAGCTGCCCGTGGGGAATTCCGACAACCAAAACGCTCACTTGCAAAATTCCGATCTACCGTTCAAGTGTCACCTCTGCGACAACTCGTTTTCCGAACGTCAAGACGCTCTGGACCACATTAAAGACAAACACACGTCGGAATACGAATTGTTGATGTCGAAAAACGCCTTAGACACCGGCGCGACGACCCCAGACGAAAACATCCACCACGACGATAACGAAGACAACGAAATCCGTGGAAAATTCCCCGATTACGCGAACCGCAAAGTCATCTGCGCCTTTTGTATGCGTAGGTTCTGGTCGGCCGAAGATCTACGGAGGCACATGCGCACCCACACGGGCGAGCGGCCCTTCAGTTGCGACATATGCCACCGGCGTTTCACACTCAAACACAGCATGTTGCGACATCGTAAGAAGCACAACGTCGCGTTCGAAAACGACAACATTAACAGCGACGAAGACAACGGTAATTTAAATTTCGATAAGTTCGTTAAAGGCAATAACAACAATCTGGTCGGTAAATCCGGTGAGAAAACGGACGAATCTGACGGTGCCGAGGGCGGTTCAGACTTAATAAGCAATTTGCTTGGTATTAGAGATCGATCCATCATCGATCAGGTGCTTACTGCGTCAGCCGACGACGCTGCAAAGCTTTTAGGCGTCAAAAGTGGCGAACAAGAGTAG
Protein Sequence: MELPSDNTELLAKENSINQSNRSDSGIFSATGNSTNTSDEHMDNTNHSESGETDNHSNCSSPDRKFLCPICETMLTSQHEFTLHIRSHNNENEAQDNEKGFTCRICCKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHSHRNENYESDESTDSSASEHSKSVEFNNNKISAKFDGEEKLVEDNHISENKRKCYDEEDHKPRIKVRKLYNNDRTKTYKCPVCERDDFTSLDALDMHLEDNHTDYPAKCHICNVVFKNNKLLSVHRSTAHSSDDAVRNLKNSIVGFKDLTFVDFSSQKFPHIARYECEKNLHKASSGLKFQCEKCSRAFPCASSLEIHHMDCISGLDLSTNKNLLDLTKNNHFSEKEIRRADFFARLDLQNKLSEKAEQPMQMPEAPTKLQQRLLQSVDGGKDLADIQSIISLTTNGSLLQQLQGKTSEMVAAPQKHFPEIQPETKHENEEESQDLFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPTEDPSNDEISKLVAREEKKINTSLEINDNSSEKIRCSTPKSFPTTPEILKTPEKHHVSPYKELITPKISISANLLALKDLSTPKDYTNNFKSLNDVSNDSLRPIKEQRIMMSEQFSPYSAPSFNFSPKNTNSSTPHHLIPKIQVDIPKQVVEYENNLKEEYDANDEDQPLNLVLDLSKKKTEKNLEIDIKPKLEEVPQDLTKKSCDIVSPHSMNEILAQQLLKNTPKIDPASLYASQLAFYRNGFTGLPGLPNWSFPLNPLLFPGMPNPLLPQDPQEIKERLQRLQLCGGGMIMDNFAERLKNFHQHSLNSNNLNAFNNMKLNDHKSEINFQEMNYSPSKSIKSEDLKPLTLNIDQNFTDNLTKLHSPLSQPKSEMMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNIGSVNRKNQTGHVTPKNNFCNINIPNYDTPKSQHYEETKDNQISDKIKYAILAQHLKTARNFNNTYNHDPKPKEDDDDCALVIDENDEILNRNNDKTDNEKNMTAMNDSCNDINYDTVCRTRILEEKLRQLHAKQQLNEKSKTNSVPSANFNKHDEPQDLVPVSRLLDNASQQQFKEYFRRDGEEREVEGISEEDEEGLVASCSTSEGNNSGTDENRSESENTTTQLPVKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAAVTINNDSTNNNNSNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHLAQGAQSDDARSQVSTGYEAGSSEDEKMPTNEQKTDWDKQVSHNKLPVGNSDNQNAHLQNSDLPFKCHLCDNSFSERQDALDHIKDKHTSEYELLMSKNALDTGATTPDENIHHDDNEDNEIRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNVAFENDNINSDEDNGNLNFDKFVKGNNNNLVGKSGEKTDESDGAEGGSDLISNLLGIRDRSIIDQVLTASADDAAKLLGVKSGEQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -