Eaen021275.1
Basic Information
- Insect
- Elmis aenea
- Gene Symbol
- -
- Assembly
- GCA_947652605.1
- Location
- OX393583.1:19373784-19375784[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 7.3e-06 0.00096 20.4 0.7 1 23 113 135 113 135 0.98 2 13 5.1e-07 6.7e-05 24.0 0.9 1 23 140 162 140 162 0.99 3 13 0.0025 0.33 12.4 3.0 1 19 165 183 165 186 0.93 4 13 0.0077 1 10.9 0.6 2 23 197 219 196 219 0.96 5 13 0.18 23 6.6 0.1 1 23 371 394 371 394 0.91 6 13 3.4e-05 0.0045 18.3 3.0 1 23 404 426 404 426 0.98 7 13 1.4e-05 0.0018 19.5 0.4 3 23 434 454 433 454 0.96 8 13 6.2e-06 0.00082 20.6 1.3 1 23 460 483 460 483 0.96 9 13 0.00028 0.037 15.4 1.7 1 23 491 513 491 513 0.99 10 13 5.3e-05 0.0069 17.7 1.3 3 23 521 541 519 541 0.98 11 13 0.0059 0.77 11.2 0.6 1 23 547 570 547 570 0.96 12 13 0.0026 0.35 12.3 3.8 1 23 584 606 584 606 0.96 13 13 1e-05 0.0013 19.9 4.0 1 23 612 635 612 635 0.97
Sequence Information
- Coding Sequence
- ATGTTGAATTCTGAAGATCAATGTAATATTTGTTTAACATGCGATTTTCCACTAGTTCAAGCAAATAAAAGAGATACTAATGGTATAAATTGGTGTGTAAAATTAACATCTTGTGTGCCTGAGGTGGTTTGGACAGATGAATCATTTATATGCTCTTCTTGCACTGGACAACTTGATATAGCATACAATTTTCGTAATCTGTGTTTAAACCTACTAACTTATATGAAACAAGTGACTGTTCTTCCAACAAAGGAACTTCAAAGCGATATTAAATCAACAAACTTAAAACAACAAGGTGTCCTAAAATTAAACAACATAGACTCGAGCAATTGGAAGTATTCATGCCCTTTCTGTAACAGAAAATTTCCAGTTAAAGCCAATTTAGATAAACACCTAAAAATGCATCCTAAAAGAGACTACAAATGTTTTCAGTGTGGCAAAACATTTGTACAAAAAATATCGTTGGTGAAACACATTCAAATACATTTGAAACACATATGCAAATCCTGTAACAAACAATTTATAACTGAATCAGAATTGAAAAAACATAGCTGTGAAATTTTAAACTCGCCAAAAAAGCAACGAATTAAGTGCCTATTGTGTGAACGAACATTTAAATCTACATTAGCTGTAAAGCAACACATGAGTCGAGGGCACAAGGTAAATAGTGTCGATACAAATAATTCCAAAAGTATTAATGACAATGGCATAATGGACAATGATCGTACAAATGGTGCAGATCACATGTCAGATTTTTGTGATCGCAGTCTGATTTTAAATGATTCTATTTCTACTTTAAATGATCACACTTGTGATTCCAACTCTGATTTAAATTGTAGCTCGATTGATTTTAATAACGACCATGCTTCAGATGAAAATGATTTAGCTACTATTAAAACAACAGATGGTAAAACAGGTGATTGTGATTTGACAGTGGGGGAACCAACATTCTATTTTATGAAAACAAACGACGGTCAATTACAAACAATCGAGGGTCAATTACAAATGAACGAATGTGCTAATGACATTGTATCAAGATTAAGGAACGGAAAACAAGAAAAATTAGAAAAGAAAGTGAAGGGTGTAATAAAACCGATACGTCAGACTGTGTTTACGTGTGAAATTTGTAAAATTGTTGTAAATTCGGGTAAAAAACTTTTGGCGCATGCTGTAAAAGAACATGGAATTGACAGAAAGCTTGTTAAGCCCTACAGTTGTGACAAGTGCGACAGTAAATTTAGTACGTCTTCAAATTTACTGCAACACAAAAAGTACCACATGGGAAAAAGGACGAACATTTGCAGTTATTGCGGAAAAGGGTACATAACGAAAAGCGATTTGAACACACACGAGAAGCAACATTTAAACAAACGCGAGTACAAATGCGAAACTTGCCCTAAAAGCTTCAACACCTACAAGGATCTGCGATCGCACAAACTCGTAGTGCACACAGATCCAAGTACATGGAACTATGTCTGTTCGTTTTGTGAAAAACGATTTCCAATTAAATCTAACCGTGATCAGCACATGCGACGACACACAGGAGAAAAACGATTTGGTTGCCACATTTGTGAAAAACGATTTGTAGATAAAATCGTGCTGCAAAAACACATAAAATCGCACTCGAACGTTCGCGCTTACAAATGCGAACAATGTGAGAGGGAATATAAAGACAAAAAAATTTTAGAGATACATCTAACGAAAATTCACGGTATCGGGAATGCGAAAATTCCAGTTCGAGTCAAAAAATACTTTTGTCATATTTGTCCTAAGTCGTATTTTGCAAAAAACAAACTAACGAGGCACGTTTTTTCGCATTCCGGAGAGAAGCCCTTCTTTTGCCATATTTGTGAAAAGAAGTTTACCGATAAGTCTTACGTTAAACAGCATTTAAAAACAGCGCATAATGTTGTTGAAGCTGATCAAAATAAATATAAATTTTAG
- Protein Sequence
- MLNSEDQCNICLTCDFPLVQANKRDTNGINWCVKLTSCVPEVVWTDESFICSSCTGQLDIAYNFRNLCLNLLTYMKQVTVLPTKELQSDIKSTNLKQQGVLKLNNIDSSNWKYSCPFCNRKFPVKANLDKHLKMHPKRDYKCFQCGKTFVQKISLVKHIQIHLKHICKSCNKQFITESELKKHSCEILNSPKKQRIKCLLCERTFKSTLAVKQHMSRGHKVNSVDTNNSKSINDNGIMDNDRTNGADHMSDFCDRSLILNDSISTLNDHTCDSNSDLNCSSIDFNNDHASDENDLATIKTTDGKTGDCDLTVGEPTFYFMKTNDGQLQTIEGQLQMNECANDIVSRLRNGKQEKLEKKVKGVIKPIRQTVFTCEICKIVVNSGKKLLAHAVKEHGIDRKLVKPYSCDKCDSKFSTSSNLLQHKKYHMGKRTNICSYCGKGYITKSDLNTHEKQHLNKREYKCETCPKSFNTYKDLRSHKLVVHTDPSTWNYVCSFCEKRFPIKSNRDQHMRRHTGEKRFGCHICEKRFVDKIVLQKHIKSHSNVRAYKCEQCEREYKDKKILEIHLTKIHGIGNAKIPVRVKKYFCHICPKSYFAKNKLTRHVFSHSGEKPFFCHICEKKFTDKSYVKQHLKTAHNVVEADQNKYKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -