Basic Information

Insect: Elmis aenea
Gene Symbol: zfh1
Assembly: GCA_947652605.1
Location: OX393580.1:48190567-48194412[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0012 0.16 13.4 0.8 1 23 220 242 220 242 0.97

2 11 5.3e-07 7e-05 24.0 2.7 1 23 248 270 248 270 0.98

3 11 0.00051 0.067 14.6 3.2 1 23 278 300 278 300 0.95

4 11 0.00025 0.032 15.6 2.0 1 23 306 328 306 328 0.98

5 11 1.1e-05 0.0015 19.8 0.9 1 23 337 359 337 359 0.97

6 11 3.1e-06 0.0004 21.6 0.2 1 23 365 387 365 387 0.95

7 11 4.3e-05 0.0056 18.0 1.0 1 23 393 415 393 415 0.99

8 11 7.2e-06 0.00095 20.4 0.4 1 23 421 443 421 443 0.98

9 11 0.00077 0.1 14.0 0.3 3 23 451 471 450 471 0.99

10 11 6e-05 0.0078 17.5 0.6 1 23 477 499 477 499 0.97

11 11 5.5e-08 7.2e-06 27.1 1.1 1 23 505 527 505 527 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0012	0.16	13.4	0.8	1	23	220	242	220	242	0.97
2	11	5.3e-07	7e-05	24.0	2.7	1	23	248	270	248	270	0.98
3	11	0.00051	0.067	14.6	3.2	1	23	278	300	278	300	0.95
4	11	0.00025	0.032	15.6	2.0	1	23	306	328	306	328	0.98
5	11	1.1e-05	0.0015	19.8	0.9	1	23	337	359	337	359	0.97
6	11	3.1e-06	0.0004	21.6	0.2	1	23	365	387	365	387	0.95
7	11	4.3e-05	0.0056	18.0	1.0	1	23	393	415	393	415	0.99
8	11	7.2e-06	0.00095	20.4	0.4	1	23	421	443	421	443	0.98
9	11	0.00077	0.1	14.0	0.3	3	23	451	471	450	471	0.99
10	11	6e-05	0.0078	17.5	0.6	1	23	477	499	477	499	0.97
11	11	5.5e-08	7.2e-06	27.1	1.1	1	23	505	527	505	527	0.99

Sequence Information

Coding Sequence: ATGGAAAATGAGAACTTTAATTTGGATTTTGAAAAAACGTGCAGAATATGCGTAGCTGTAAATTTAAAAATGAAACCACTATTTGAAGTGGTCATTTCAGATACATATAAAATTCGTATGACCGATTTTATTCGCAGAATAGCGTCAATAAAGATGACAAAAAATGACGGCCTACCGGAAAATGTTTGTTTATCATGCATTGAACAGGTGTGTGGTGCCTATAATTTCTCACAAAAATGTATCAATTCGGATCGAGTTTTGAAACTTCACCGTAAACAACAAGACTTGAATAACATACAACAAGAAATATTGGAAGAAGAAGATCTTACAACCTTAACCAACATTGACGAAGGAAATTTAATATTTACTGACGATTATGATATATCGAAAGCAGGAGATAAAAATTTAATAGAAGTTGATGAAATTCTGACTGATTACAATGATCCTTTGCCAACTGAAAGTTGTGATGAAGGAAAAGAAAATTCTAATCAAGAAAATCTTTTACTGGAAAATGTAACTTCAGATTGCAAGTTTGAAATTGTGTATGAAGATGCTAAAGATGACGATAACCACGAAACTATAGAAAATAATAGCGATGAAGAAGATGCACCAGATGTACCTCCACCATCAACCAAAAGTAAACGATACCAAAAGAAATATTCATGCAATACATGTTTTGAATCGTTTGGTTCGTTAGATAAGCTGGTGAAGCATGAAAAGCTACACGATTCCAGTCGTCCATATAAATGCGAAGAGTGTTCCAAAACATTTTCCAAAAAATCGCACCTAAATATTCATGCACGTGCTCATATGAAAGTGGAAGACAAGCAGCATGTAtgcgacaagtgtggccaaaagtttgcctattcttatttattgaaacaacacagctacaagcatgcggaaaataaaccattcccttgtagtaaatgcaacaaagggtgtttgactgctgaaagccttaaaagacatatgaagatacacgctgataactatgtgcaaaaaaaacacgagtgtaaagtctgctcaaaagtgtttccatatccaagcttcttggcggaacacatgaagaatcacacaggagaacgtccatttctttgttccatgtgcggcaagggatttcggcaaaatggagccttagcttatcacataaggtcacacaccggatttaaaccttactcctgcaatatttgcaaaaacagttttatgtctcgagGTGTATTACGTGTGCATATGCGTAGGCATACCAACGAAAGACCTTTTATTTGCGATATTTGTGGAATGGGATTTCGACAGTCCACTGATATGAAGAGTCATCGCCGAATCCACACAGGAGAAAAACCTATTTTATGCACTGTGTGTGGCAAACGAATGGCAACAACAGGACAATTGACAGTTcatttgcgatctcacacgggcgaaaaaccttttgcctgcgatttctgtctcaaagcgtttgccacgaagaccatgctggtaaaacacagaagaattcacacaggagaacgtccttacgtctgcaatatttgtggtcgtgcttttaaccaaagtagtacattaaaaacgcacactaaaacacataaaataaagctcCAGAAAAAGCAAAATTCCAGCGTTAAAATCGCCCCTAAAATTATTGTTAATAACGGAATAGTACTTACCATTGTTAAAAATATCGATGACGAGGGGCTTATACCAATACAATCAAGTAGAGATAATGATGATGTCGCTTCCGGCAGTGAAAGTGTTGATGAAAATAATGTTAAGACTGACTGTTATTCGTTGATGCCTGCACCTGTACCATTGCTGTAA
Protein Sequence: MENENFNLDFEKTCRICVAVNLKMKPLFEVVISDTYKIRMTDFIRRIASIKMTKNDGLPENVCLSCIEQVCGAYNFSQKCINSDRVLKLHRKQQDLNNIQQEILEEEDLTTLTNIDEGNLIFTDDYDISKAGDKNLIEVDEILTDYNDPLPTESCDEGKENSNQENLLLENVTSDCKFEIVYEDAKDDDNHETIENNSDEEDAPDVPPPSTKSKRYQKKYSCNTCFESFGSLDKLVKHEKLHDSSRPYKCEECSKTFSKKSHLNIHARAHMKVEDKQHVCDKCGQKFAYSYLLKQHSYKHAENKPFPCSKCNKGCLTAESLKRHMKIHADNYVQKKHECKVCSKVFPYPSFLAEHMKNHTGERPFLCSMCGKGFRQNGALAYHIRSHTGFKPYSCNICKNSFMSRGVLRVHMRRHTNERPFICDICGMGFRQSTDMKSHRRIHTGEKPILCTVCGKRMATTGQLTVHLRSHTGEKPFACDFCLKAFATKTMLVKHRRIHTGERPYVCNICGRAFNQSSTLKTHTKTHKIKLQKKQNSSVKIAPKIIVNNGIVLTIVKNIDDEGLIPIQSSRDNDDVASGSESVDENNVKTDCYSLMPAPVPLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -