Eaen032281.1
Basic Information
- Insect
- Elmis aenea
- Gene Symbol
- -
- Assembly
- GCA_947652605.1
- Location
- OX393577.1:55436264-55443110[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8 1e+03 1.4 0.5 8 23 108 123 107 123 0.88 2 13 3e-05 0.004 18.4 3.0 1 23 129 151 129 151 0.98 3 13 0.0026 0.34 12.4 1.5 1 23 208 230 208 230 0.98 4 13 2.4e-06 0.00032 21.9 2.6 1 23 236 258 236 258 0.98 5 13 3.8e-05 0.005 18.1 1.8 1 23 264 286 264 286 0.97 6 13 1.4e-05 0.0018 19.5 0.9 3 23 297 317 295 317 0.96 7 13 2e-05 0.0026 19.0 0.2 2 23 324 345 323 345 0.95 8 13 1.7e-08 2.2e-06 28.7 2.6 1 23 351 373 351 373 0.99 9 13 2.8e-07 3.6e-05 24.9 3.3 1 23 379 401 379 401 0.98 10 13 4.8e-05 0.0064 17.8 2.6 1 23 407 429 407 429 0.98 11 13 0.00019 0.025 15.9 0.8 1 23 435 457 435 457 0.93 12 13 1.2e-06 0.00016 22.8 0.1 2 23 464 485 464 485 0.97 13 13 4.9e-06 0.00064 20.9 0.1 1 23 491 513 491 513 0.97
Sequence Information
- Coding Sequence
- ATGAGTGTTGATCATCTTAATTTTAATTCAATTTGTCGAACCTGCTTATCGTTCAAAACAGAGCTAAAACCTCTGTTTGAAAATGATATAGCGAATATGTTACAATCTTGTCAATTTTTGCAGGTTGCTTATAATGACGGTTTTCCAAGTTATATATGCACATCATGTCATGATATTGTAATAAAAAGTTATAGTTTTAAAAAACAATGCGAGAAATCGCATTCCATTTTAGAAAGGTGTATATCACAGGGTTTAAATACATTAAAGGAATTTCCAAATGTTGATAATTTGTTGTCGAATTTGGATCAAGAAGAAACATTTAAATGTATTAAACATGAAGATGAATTCTCTCTGCATCAGAATACTCACAAAAATAATGACAAATATAGTTGTAACAACTGCACGAAGAAATTTCCGAATATGCAGTTATTTAAAAAGCATATGAAAGTACACATACAAAAGAAGAGGCGAAAATGTTCAGATTCTGAGAGAATTTTTGCTGATAATGATTATGATGAACAGTTAACTACAAGCATTGATATTAAACAAATCAATGTCCAGGAAGATTTACCGGAAGACCTAACAGCATTTTTAGAAGAAAAACCATCGTCACCACTGCCTTTTCCATGTTCTGATTGTTCACAGTCGTTCAGTGCAGATTGTGACCTCCAGTTACATCGTTCTACTCACTCAAAAAATGGAGAATATATTTGTACAAACTGTAAGAAGCAATTTGCAACCAGACAAATGTTAAAAAGACACATAAAAACACATATGTTAAATAAGCCACATGTTTGCAAGGCATGCGGAAAAGGGTTTGCCGAATCCCATGCTCTTACTAAACATGTTCGAAGACATACAGGACAGCCACGAGAGAAAAAACATTTGTGTACTGTATGTGGACAAGGGTTTTCTGAACCGTTTTACttgaatgttcacatgcgcaaacatacaggagaacgacctcttatgtgctctgcttgtggaaagtcatttgcagatccacgatcacttaaagctcacaatatgacccatacgggagaacgtccatACAAATGCCATTTATGCAAcaaagcgttcagtcaaagtgttaatttaactaaacatataagagtgcatacaggggaaaagccatatatctgttcagaatgtggaaaatgtttcactcagtcctctagtttggacaaacattcccgtacgcacactggagaacgtccgtatgcttgtgaaCATTGTCCAAAAAGGTTTGCGGAAAAGGGTACTTTAGTCCATCATAACagaacacatacgggagaaaagccatatttttgtgcgagctgtggtcgatccttcgctagctcatccgaactaaagttacacgatcgaaaacattccggggtcaagaaaaacgtgtgtgatgtgtgcggtaaggattttgcaacacccagcaatcttgttgttcactcaaggacacacagtggagaaaagccttttccgtgtgcagtttgtggtcgaccatttgcagataaaggctcactgaagaaacattcgaaaattcacacagacaagaGCAAAAGTATCGAACAATGTGTTATTCAACCATTTGTCAATTTGCAGAGCTTAAGTGGACAAAATTTGGATAATTTACACAACGTTATAGAAAGGACTGTAGATATAGGTTTAAGTGAACGAATGTATTTTAATGTTTTTTAA
- Protein Sequence
- MSVDHLNFNSICRTCLSFKTELKPLFENDIANMLQSCQFLQVAYNDGFPSYICTSCHDIVIKSYSFKKQCEKSHSILERCISQGLNTLKEFPNVDNLLSNLDQEETFKCIKHEDEFSLHQNTHKNNDKYSCNNCTKKFPNMQLFKKHMKVHIQKKRRKCSDSERIFADNDYDEQLTTSIDIKQINVQEDLPEDLTAFLEEKPSSPLPFPCSDCSQSFSADCDLQLHRSTHSKNGEYICTNCKKQFATRQMLKRHIKTHMLNKPHVCKACGKGFAESHALTKHVRRHTGQPREKKHLCTVCGQGFSEPFYLNVHMRKHTGERPLMCSACGKSFADPRSLKAHNMTHTGERPYKCHLCNKAFSQSVNLTKHIRVHTGEKPYICSECGKCFTQSSSLDKHSRTHTGERPYACEHCPKRFAEKGTLVHHNRTHTGEKPYFCASCGRSFASSSELKLHDRKHSGVKKNVCDVCGKDFATPSNLVVHSRTHSGEKPFPCAVCGRPFADKGSLKKHSKIHTDKSKSIEQCVIQPFVNLQSLSGQNLDNLHNVIERTVDIGLSERMYFNVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -