Eaen010617.1
Basic Information
- Insect
- Elmis aenea
- Gene Symbol
- su(Hw)
- Assembly
- GCA_947652605.1
- Location
- OX393578.1:35214364-35229259[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00052 0.068 14.6 3.1 1 23 138 161 138 161 0.96 2 13 0.0036 0.47 11.9 0.6 1 19 193 211 193 216 0.94 3 13 4.8e-05 0.0063 17.8 0.5 2 23 223 244 222 244 0.97 4 13 4.2e-05 0.0055 18.0 2.8 1 20 250 269 250 271 0.95 5 13 2.5e-07 3.3e-05 25.0 0.8 1 23 282 304 282 304 0.98 6 13 0.00023 0.03 15.7 0.4 1 23 314 336 314 336 0.99 7 13 4.1e-06 0.00054 21.2 0.5 1 23 342 364 342 364 0.98 8 13 3.8e-06 0.00049 21.3 0.5 1 23 370 392 370 392 0.99 9 13 2e-05 0.0026 19.0 2.6 1 23 398 420 398 420 0.95 10 13 2.8e-05 0.0037 18.5 1.5 1 23 426 449 426 449 0.95 11 13 4.7e-05 0.0062 17.8 0.8 2 23 456 477 455 477 0.95 12 13 2.3e-07 3e-05 25.1 1.5 1 23 483 505 483 505 0.98 13 13 3.8e-06 0.0005 21.3 3.9 2 23 512 534 511 534 0.95
Sequence Information
- Coding Sequence
- ATGGAAGAAGACGTGACAACTGAGTACGTTGAAGAAATGGCAGATGATGAATTGGATAATCTTGAAACAACAGTCCTAAGAAACATTCCACTTGAGGAGGCTGAAGAACACATATTACAAGATGGTTCTGAAATGATAACAGGAAATTCTGATGGAAATCTGGAAATAAGAACAGTTGAAGAATTGGATCTTTTGGAGCCCGAAGAAGTAGAAGAAGAAGAAGGAGAAGAAGAAGATGATGATGATGAGGCATTTGAAGCTGAATATATTGAAGAAAATGAAGAACTTGATGAAGATCAGTACGAAGAGATGGAAGATGATGCAATAGAGGAATATGAATCAAATGATGAAGACACTGTTATTAAATCAGAGTTGGATCCAAATAATGATCAAGAAGCAGAAGATGAACATTACCCTTGCACACTTTGCCAACGCATTTGCAAAACTGCTGCTACTTTGAAAAGACATATAACAGTGTGTCATGCCAAGGCTGGTGAACTGCAAGATGATCCTCTTGCTTTTGAGCTGTGCATTTGTTGTGGAGAACCTGTAGATTCAGCTCATACGAGTGGTGATTACAAATGCGATATATGTGAAAAATTGTTTGTAATGCCAGTCAGTCTCGAAAGGCATTGTAGTTTAGAGCACACAGAAGGAGAAATTTGGCAGTGTAGTGAATGTAAAGATTCTTTTACGTCCCGAAATGATTTAGCAGAACATATGCGAAGTCATCCTCTTGCTAAAGCCTTTTCATGTAACAATTGCCACAGGGAATTCACCCGCAAATATCATCTGGATCGACACATTGCACAAATTGGTTGCAACGGCAATCCTAAGAACGCATTTAAATGCCAGGTGTGTGCAAAAGTATTTAGTCGAAAGGATAACTTGAGAGATCATTTACGAGCTCATGCTGGACAAATTAAGAAAAAAAAGGTTTTCACCTGCATGTACTGTCAGAAGCAATTTCAAGGGTCTGCTCTTCTTGCTGTTCATGTGAGAACTCATACAGGAGAAAGACCATATGCCTGTGATTTCTGCCCAAAAAGTTTTCCATCCAGCGGTGCAATGAAAAAACATCGGAGAATGCATACCGGGGAAAAGCCCTACGAATGTTCTCAGTGTGGTAATAGATTTGCTGCAAAAGAAACACTCAATAGGCATATACGAACTCATTCTGGACTTAAACCACATTCGTGTCAATTTTGTGGAAAGTCATTTATCCAAGCGGCGCAGTTGCGTGCTCATATTTTTCATCATACAGGGGAGAACGCTTACATCTGTCCACATTGCAATCGTGCATTTAACCGTCGTGCAAGACTCACCATGCATATTAAGTTTATTCACGAAGGAGCACAGCCAATGGAATGTGACCAATGTGACAAACGCTTTTTCAGGAAAGAAGATCTTGCACGTCACTCAATGTTACATAGTGGAGTAAAACCTTTTGAATGTGATGTATGTCACAAGACGTTTGCTGTAAAATCATCGTTGAAGATACACATGCTCACACATCGGAAAGAGCAGCCATGTAGCTGCGATGAGTGTGGTCGAGCATTTATCCGCCAAGATTGTCTTCTACGTCACATGCGTTCTAAACACCGTGATGTTTTAGAAGACATTATGGCCGGTGCAGAAAAAAAGAGGCTCCAACAGCAACTTCTCAATGCTGCTTCAGATGCAGCAAAATCTGGCAATAAACAACTAACGGATAATAAAATTTGGAACGAACTCACGCTTACTGATTCCATTAAAGAGCTCCTAGGTTTACTTGTTGATGAAGGCACGTTAAAATCTTTCGGTTGGCCCGATACTCCAGTTGATAAATTGCTAGATGCTGTCATTAAGCGTTGCGGACACAAACCAGCATCAGAGGAAGATTTTGATTATATCGGGCGTATGAGAGAAAATGCAAAGTTGTTGTTCACTGTTGTAATTGACGATGAAGCAGTGAAATCGCTTTTGAACAACCAGACAGTTGATGAAGTTATCTTACATGTGTTGAAGTTAGCAAAGTCAGAGTAA
- Protein Sequence
- MEEDVTTEYVEEMADDELDNLETTVLRNIPLEEAEEHILQDGSEMITGNSDGNLEIRTVEELDLLEPEEVEEEEGEEEDDDDEAFEAEYIEENEELDEDQYEEMEDDAIEEYESNDEDTVIKSELDPNNDQEAEDEHYPCTLCQRICKTAATLKRHITVCHAKAGELQDDPLAFELCICCGEPVDSAHTSGDYKCDICEKLFVMPVSLERHCSLEHTEGEIWQCSECKDSFTSRNDLAEHMRSHPLAKAFSCNNCHREFTRKYHLDRHIAQIGCNGNPKNAFKCQVCAKVFSRKDNLRDHLRAHAGQIKKKKVFTCMYCQKQFQGSALLAVHVRTHTGERPYACDFCPKSFPSSGAMKKHRRMHTGEKPYECSQCGNRFAAKETLNRHIRTHSGLKPHSCQFCGKSFIQAAQLRAHIFHHTGENAYICPHCNRAFNRRARLTMHIKFIHEGAQPMECDQCDKRFFRKEDLARHSMLHSGVKPFECDVCHKTFAVKSSLKIHMLTHRKEQPCSCDECGRAFIRQDCLLRHMRSKHRDVLEDIMAGAEKKRLQQQLLNAASDAAKSGNKQLTDNKIWNELTLTDSIKELLGLLVDEGTLKSFGWPDTPVDKLLDAVIKRCGHKPASEEDFDYIGRMRENAKLLFTVVIDDEAVKSLLNNQTVDEVILHVLKLAKSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -