Eaen025174.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Elmis aenea
Gene Symbol
-
Assembly
GCA_947652605.1
Location
OX393581.1:41694200-41702551[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 6.4e-08 8.3e-06 26.9 1.3 1 23 464 486 464 486 0.99
2 12 9.3e-07 0.00012 23.2 7.3 1 23 492 514 492 514 0.98
3 12 4.7e-06 0.00062 21.0 0.8 1 23 520 542 520 542 0.99
4 12 0.041 5.4 8.6 3.2 1 23 548 570 548 570 0.95
5 12 0.0019 0.25 12.8 2.7 1 23 576 598 576 598 0.97
6 12 1.2e-08 1.6e-06 29.1 3.7 1 23 604 626 604 626 0.99
7 12 1.1e-06 0.00014 23.0 1.4 2 23 632 653 631 653 0.97
8 12 1.6e-06 0.00022 22.4 2.8 1 23 659 681 659 681 0.99
9 12 1.7e-06 0.00022 22.4 1.3 1 23 686 708 686 708 0.98
10 12 2.2e-06 0.00029 22.0 4.1 2 23 715 736 714 736 0.98
11 12 5.4e-08 7.1e-06 27.1 1.8 1 23 742 764 742 764 0.99
12 12 1.2e-05 0.0015 19.8 3.3 1 23 770 792 770 792 0.98

Sequence Information

Coding Sequence
ATGAATAATGTTTTTCAGTTTGCAAACCATTGTCGGACTTGTTTGCGTGTGGAAGACCCCCTAACACCTTTAACTGCCATTGATACAGATTCAATCAAGTTTAGTGATAAAGTAATGGCTTGTATATCAGAAATTGTTTGGTTAAAAGACGGCTTTCCACTCTTTATATGTTCCCCATGTATCGAAAAAGTAAGGATAGCATACGAATTTCGGATTACATGTTTTGAATCAGAAAACACATTACAACATTGTTTTAATGAGCAGAAGATAATCAATGGTCAGCCTTATGTAACTATACAAGAATTCCCGATACCGAGCAATATACCAAATATGATTCAAAATAATCAAAATATGCCTTCAAAAACACCACAGCACAACTCTGAGTATCTCAATATTAGACACTTCTTGGACAATGAAGATATATCAAGATCTTCTACTACAGCTGACATGGAAACATCACGAAGTGCAACTCCTGATTCCATAGCAACTACAGGTTACGCTAGAATCGACAAAGCACCTAAAAAAATCGTCAATACTCGGTCAATTAAAACTCAGACTCAACCGTTGCCGCAATATCCTACTCTCAcgcctgcagcggctcgtttagaggctcagcagaACCAAATCGTTTTTAATGATAGAAATAGTCCAAATGGGCTCACGATGGATAATATATTTCATGTGGCAGATTGCTGTCGTGCCTGTTTAAGAATAGAATGTTCATTAACACCTACAAATGCTACAGATAATGATTCAATCAAGTTTTGTGACAAGTTAGTTGCTTGTGTTTCTGAGGTGGTATGGATGAAGGAAGGTCTTCCGTCTTTAATATGTACAACATGTATAGATCGATTACGAGTGGCATACGATTTTAGAAATGTCTGTTTGCAGTCCGATCATACATTACAACGATATATTAGTCATTTACAAGAAGATGCTAAGCAAACAAGTATAAATAATGGACAACGTCCTTTAACAACACCAACAAAATTTGATTTTGCAATACCTACAAGTAATCATGACAGTTTACCTTGTATAATCGAGGAACCACAAAACGCAGAATATCTCCATTTAAAACATTTTTTGGATAATGACGAGGAATTATCAAAGTCTGAAGGCCTTATAGATGCAGCTACTTCTCGGAGTACAAGTCCCGATTCAAGTGCAGCTTCCATAGCTAATAGTTTTATGAATAGTCAACATGAACAGCCGCAACAGCTCATGCCTAAAATGCAACATCATCAGCATTTGCAAGTACACGATCAGTCATTGCAAATGCACCAGACGCAGGAATTTAAATCACCTAAGCAAGTTATCAAACGTACAACGGGCATACAGGTGAGACCACCAACCCCGTCTTCTCTTGGTGATGGTGCTGACTCCaagccgtttacttgtactgtttgtggtaaaaattataggaaaaatgcaaatcttcgaatacacatgcgcactcatacgggggagaagcctttcgaatgcaaatactgcgataaaaggttttatcattcatcccatttacgcgaacacatacgaaggcatacgggggaaaagcctttccagtgtgcggtgtgcaataaacgcttcacaatcaaaggggagcttacgatgcacatgaagtcacatacgggagaaaagccctatgcctgtacgtgttgcgatcgaaggtgtttaacggctgccgatcttaaagtgcacatgcgcacccataccggagaaaagccgttttgttgtgtgacttgcggcaaaaaatttgccagcacttacattttgaattctcatattaagacgcatacgggcgaacgtccgtactcgtgtacggtttgtgataagacgtttacgcaatcgtcgcatctgaatgtacacatgcgcaagcatacaggagagaaagttagttgtaagatatgtgatgcgaagtttactcactcgtcgcagttgacggttcacatgcgcgaacatacaggcaaacagccttacaagtgtacgatgtgcgataaggtttgtaattatgcttcggaactacagacgcacatgatgaaacatacgggggagaagtttacctgtgttacgtgcgacaagaagtttacgacagctgcgtatttacaggagcacactaggacccatacgggagagaatttatcgacttgtacgatatgtgatcggcagttcacgagacatcagtatctggaaaaacacatgaggactcatacgggagaaaagccctacacgtgtttcacatgtggtaaaaagttcactcagtcttcgtcacttaaggtgcacatacgtatacatacaggggagaagccctatcattgtcaaatttgtgatcgtcgatttacaacgtcttcagatttatcggcacataataaaaaacataAGAAGTACATTAATTTATAA
Protein Sequence
MNNVFQFANHCRTCLRVEDPLTPLTAIDTDSIKFSDKVMACISEIVWLKDGFPLFICSPCIEKVRIAYEFRITCFESENTLQHCFNEQKIINGQPYVTIQEFPIPSNIPNMIQNNQNMPSKTPQHNSEYLNIRHFLDNEDISRSSTTADMETSRSATPDSIATTGYARIDKAPKKIVNTRSIKTQTQPLPQYPTLTPAAARLEAQQNQIVFNDRNSPNGLTMDNIFHVADCCRACLRIECSLTPTNATDNDSIKFCDKLVACVSEVVWMKEGLPSLICTTCIDRLRVAYDFRNVCLQSDHTLQRYISHLQEDAKQTSINNGQRPLTTPTKFDFAIPTSNHDSLPCIIEEPQNAEYLHLKHFLDNDEELSKSEGLIDAATSRSTSPDSSAASIANSFMNSQHEQPQQLMPKMQHHQHLQVHDQSLQMHQTQEFKSPKQVIKRTTGIQVRPPTPSSLGDGADSKPFTCTVCGKNYRKNANLRIHMRTHTGEKPFECKYCDKRFYHSSHLREHIRRHTGEKPFQCAVCNKRFTIKGELTMHMKSHTGEKPYACTCCDRRCLTAADLKVHMRTHTGEKPFCCVTCGKKFASTYILNSHIKTHTGERPYSCTVCDKTFTQSSHLNVHMRKHTGEKVSCKICDAKFTHSSQLTVHMREHTGKQPYKCTMCDKVCNYASELQTHMMKHTGEKFTCVTCDKKFTTAAYLQEHTRTHTGENLSTCTICDRQFTRHQYLEKHMRTHTGEKPYTCFTCGKKFTQSSSLKVHIRIHTGEKPYHCQICDRRFTTSSDLSAHNKKHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-