Eaen012590.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Elmis aenea
Gene Symbol
-
Assembly
GCA_947652605.1
Location
OX393580.1:1605885-1610175[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.58 76 5.0 6.1 2 23 166 187 165 187 0.95
2 16 3e-06 0.0004 21.6 3.9 1 23 192 214 192 214 0.97
3 16 0.00018 0.023 16.0 6.0 1 23 220 242 220 242 0.97
4 16 0.00041 0.054 14.9 0.9 1 21 248 268 248 269 0.94
5 16 5e-05 0.0066 17.8 1.3 1 23 276 298 276 298 0.96
6 16 0.0034 0.44 12.0 2.8 1 23 495 517 495 517 0.96
7 16 6e-07 7.9e-05 23.8 3.0 1 23 523 545 523 545 0.98
8 16 4.5e-06 0.00059 21.1 3.7 1 23 551 573 551 573 0.98
9 16 3.2e-05 0.0042 18.4 1.0 1 23 579 602 579 602 0.95
10 16 0.0076 1 10.9 0.6 1 23 614 636 614 636 0.98
11 16 4.2e-07 5.5e-05 24.3 4.8 1 23 642 664 642 664 0.98
12 16 1.4e-06 0.00018 22.6 0.4 1 23 671 693 671 693 0.96
13 16 2.2e-06 0.00029 22.0 1.2 1 23 699 721 699 721 0.98
14 16 3.3e-07 4.3e-05 24.6 0.9 3 23 729 749 727 749 0.96
15 16 5.7e-05 0.0075 17.6 0.1 1 23 755 777 755 777 0.99
16 16 0.17 22 6.6 0.6 1 23 782 805 782 805 0.97

Sequence Information

Coding Sequence
ATGGAGAATATTACTTACGATTTTAAACGAATTTGTCGCGCGTGCAAAAATGAGTCTGCAGAACTGCGATATTTGTTCGAGGACGATGGAAATTCTGTGCCGAATCCCCGAATTGACGAGATGCTAATGGCTTGTACTTCTTTAAAAGTAAACTGTGAAGACGGCTTACCAAACTCAATATGTCAATCCTGTGCAGACCAATTACACAAAGCATACGACTTCAAGCAACTATGCGAAAGTACAGATACAAGTCTACGAGACTACTTAAGAGGAGCAAAAGATAACCGAGTTGTGAAGCAAGAATTGGTTTCTCAAATTAATGAATTGGAAGTTGATACCAGTAATATATTAGATGATATCAATACAGTGATAAGTAATGATGTCCATAACGAATCGTCTTTTGAAAATGAAAATGTTAAAGAAGAAACAGATGAGGTTAATCCAGCTCTAAATAAAGATTTTATCGAGTTGTTGGAGGATAATCAAATGTTATTAACTTGTCGTACATGTGCAAAATGTTTTACAACGTTAGATGGCTTAAAATGTCACAAACGTCTTCATACTGGTGGTTTGTTTTCTTGCAAAGAATGTGGAAAGCAATATACCAGACAAAACCATCTTCAGCGTCATGAAATGTCACATGGACGTCGTAAGATGCATATATGCAAAATTTGTAATAAGACATTAACAAGATTTGAACATCTTAAACGGCATTTAACGACACATTTAAAAGAAAAACCGTTTTCCTGTGCTACCTGCAACCGTGGATTTAACAGATCTGAACATTTAATGAATCATGCTAAACGTTGTAAGGGAGATCGAGTACACATATGTAACGTTTGTAATAAAGGCTTTAATCGTGAAGATAGTCTGGAACTTCATAAACGATTGCACGAAAATAAACTGCCCGTCTTACCAACCCTCGACAATTTGGATAACATAGAAGAACATTACTTTGAAATTGATTTCGATGGAAATTCAGTTCTTTCTGATACATCAGAAATAGACACTACCGCTGAAAACATTAGCGATTGCTTTGAACCTCAAGTAAACATATGTGAAAACTTGGATCAAATAAAAGTGGATCATGAAAAAGCGGCAGAAATGAACGACATTGCTAATTTAGACGATGAAATATACGCCGAATTAGATCCACAAGAACTAATCGATGAAAAAGACAAGATTGAGAATGAATTGTGCAAAAATGAAGAAGATAGTGATAATGATAATATGGAAAACGAAACAGATTATTTTATGAACAATGATGACGATAACCATTGTGAAAATATTAAAGAGGATTTAGATGATGTAGAAAGTACATATTCAGAATATCTTCCTTCGAAGCCTTTAAAAACCAAACGAAAACGTGGGCGCCCTCGTAAAAGTGATATTCCTGTTGTGAAACAATCTACTAGGCCCCGAGGAAGACCACCTGTTAAAATTAAAGTAGAACCCGATGATGAAATGGATATTGAGGGAGAATTTTGCTGCACAGCTTGTAATAAAGTGTTTAGTACAATGATCCTGTTGGAGAAACACTCGCAGAAGCATGAAGGAATGaaattgtacccttgtgcagtctgtagtaagaaattttcacgatccaatcatttgaagcgtcacatgatgtctcattctacagataaaccatttgtatgcgaggtttgcaaAAAGAGTTTTAATAGGCGCGATCATCTAATGCAGCACAGAAAATTGCATTCGAGGGCACAGGAGTACGAATGCGATATATGTAAACGAATGTTTGGTCGTGCTGATCATCTTGCTAAACATAAGGCGTCAAAGCATAACATCGGAGAAAAGATCATGGGAGAGAAAAGATATAAATGCGGGGTGTGCTTAAAGGGATTCACGACCGAAAAATACCGAGACGTTCATATGAAAGGTCATTCAGGTGAGAAAAAATACCAGTGCAAAACTTGTGATAAATCATTTATTTCCAAGTCACATCTGACAGAACACATGAAATTCCACAATGACAACTCCAAGAAGTACCTGTGCTCGGAATGCGGTCAGAGGTTTATCCGGAACGATTATCTTGTCATCCATATGAGACGGCATCGAGGAGAGAAGCCCTTCAAATGTAAATATTGTGGCAAAGGATTTCCAAGGACAACAGACCTAACCGTCCATGAAAGATATCACACTGGAGAAAAAACTCATTTATGTACCATTTGTGGAAGAGGTTTTGGAAGggcctacaacctgacagtccacatgcggacccatacgggagagaagccctaccagtgtacttactgtgaggctgcgtttgctcagggaaacgatcttaaagcacacgtacgtaggcacacgggagaaagattccaatgcgaattatgcagtgagaatttTTTGATGGGTTATTTGCTTACTCAGCACAAGAGGACTGTTCATGGGTTAAACGTTGTCAGCAACATCAGGCGTCTACAACCGATAGATAAAATGAATCAGTCCCAGTCGGACGAGCCCCCTCCGATAGCTATTCCTTTACCGACACCCATGGTCCCTTCTTCTATATTAAACGCTCAATTGCAGTCACAGCTGGCCGTGGCACAAATACATCAAATGAAAATTGAATCGGACATGATTTAA
Protein Sequence
MENITYDFKRICRACKNESAELRYLFEDDGNSVPNPRIDEMLMACTSLKVNCEDGLPNSICQSCADQLHKAYDFKQLCESTDTSLRDYLRGAKDNRVVKQELVSQINELEVDTSNILDDINTVISNDVHNESSFENENVKEETDEVNPALNKDFIELLEDNQMLLTCRTCAKCFTTLDGLKCHKRLHTGGLFSCKECGKQYTRQNHLQRHEMSHGRRKMHICKICNKTLTRFEHLKRHLTTHLKEKPFSCATCNRGFNRSEHLMNHAKRCKGDRVHICNVCNKGFNREDSLELHKRLHENKLPVLPTLDNLDNIEEHYFEIDFDGNSVLSDTSEIDTTAENISDCFEPQVNICENLDQIKVDHEKAAEMNDIANLDDEIYAELDPQELIDEKDKIENELCKNEEDSDNDNMENETDYFMNNDDDNHCENIKEDLDDVESTYSEYLPSKPLKTKRKRGRPRKSDIPVVKQSTRPRGRPPVKIKVEPDDEMDIEGEFCCTACNKVFSTMILLEKHSQKHEGMKLYPCAVCSKKFSRSNHLKRHMMSHSTDKPFVCEVCKKSFNRRDHLMQHRKLHSRAQEYECDICKRMFGRADHLAKHKASKHNIGEKIMGEKRYKCGVCLKGFTTEKYRDVHMKGHSGEKKYQCKTCDKSFISKSHLTEHMKFHNDNSKKYLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCEAAFAQGNDLKAHVRRHTGERFQCELCSENFLMGYLLTQHKRTVHGLNVVSNIRRLQPIDKMNQSQSDEPPPIAIPLPTPMVPSSILNAQLQSQLAVAQIHQMKIESDMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-