Eaen010073.1
Basic Information
- Insect
- Elmis aenea
- Gene Symbol
- -
- Assembly
- GCA_947652605.1
- Location
- OX393578.1:27360378-27360902[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8e-11 3.1e-08 34.1 0.2 3 42 20 59 18 61 0.93 2 2 0.63 2.2e+02 2.6 0.0 13 24 133 144 130 145 0.86
Sequence Information
- Coding Sequence
- ATGCCTACGACGTATAAGAGAAAAGCATCTGGTAAAACTAGAAGGCAATGGTCTTCAGAACAACTGACAGAAGCATTAAGAAGAATAAATTCAAGTGAAATGGGAATAAACGCAGCAGCTCGAACCTACAGTATTCCGTCCAGGACATTGCGTCGAAGAAAGCAGTCAGGGATTACCACCACCGAAATTCCACTGGGTCCTCAGGGGGTGCTAGGAATTGAAAACGAAAAAAGACTAGTCGAAGACATTCAAAGATTGGAGAAAGCAGGTTTTGCACCGGATAGGGAAACGATAAGGTCTCTTGCATACCAATTTGCAGATAAGTTGGGAGTTAAACATCGATTTAATAAAGAAAAGAAAATTGCCAGATATGACTGGCTGAATTCGTTTTTAAAAAGAAACAAGGAATTGAGTGTGAGGCAAGCGCAAGGTTTGTCATTGGCTAGAACCGCGGGAATGAACAGAGAAGAATCCAAGACTTTTTTCGACTTGCTTTTGGAACTATACACCAATTTTGATATATAA
- Protein Sequence
- MPTTYKRKASGKTRRQWSSEQLTEALRRINSSEMGINAAARTYSIPSRTLRRRKQSGITTTEIPLGPQGVLGIENEKRLVEDIQRLEKAGFAPDRETIRSLAYQFADKLGVKHRFNKEKKIARYDWLNSFLKRNKELSVRQAQGLSLARTAGMNREESKTFFDLLLELYTNFDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -