Eaen006434.1
Basic Information
- Insect
- Elmis aenea
- Gene Symbol
- -
- Assembly
- GCA_947652605.1
- Location
- OX393579.1:34221992-34227409[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 4.2e-09 36.9 0.1 3 40 17 55 15 60 0.89 2 2 6.6 2.3e+03 -0.7 0.0 14 27 57 70 55 70 0.84
Sequence Information
- Coding Sequence
- ATGGTGCGCAACTACCAAAGAAAAACTAATAGGCAAAACTGGTCCTCCGAGTACATGACACGTGCTGTAGACGCTGTTATAGCTGGAGAGTTGGGATATAAAAGGGCAGCCGACACTTTCTCCGTCCCATCTTCAACTTTAGAAAGGTACGTTAAGAAAAGACGGGAAAATGGTTCTTCTACAATAGATAAAGCCGCTGGAAAATTCAATCCTGtctttaccgcagaacaagaatctgaacttgctttgcatttaatagatttgcagagaagattattcagcgttaccttaaaagaacttcgtgaattagcttttcagttggctgaaaaaaataactACATTGAGTTTCAAAGTACATCAAATGATGTATCTGATAACACCCAAAGCCTTGATCTAACTACTGCCATAAGACAAAACGATCTTCCATTCACTTTAGAGACCGCTGAAATTGAACCAAGACCTGCTTGTTCTTGGATGCCCGACGATCGTGCACCAGAAAATCTTAACACGTCGTTTTTATGTGTCTCTCCAAAAGATGTAATTCCTTTGCCTAAAGTTCAAGCAGGGCAAAAACGAGCTACAAGAAAAAGAGGGAAAACTACAATTTTGACAGCATCTCCATATAAATCTCAATTGAAAGAAACCAAGGAAAAAATGGAAAGTACAAAAAAAGCAAAATTAGAGAGAATTAGGAGAAAATTATTAAGTGATGCAGATAAGAAAATAGATACAAATAGGAAAGGAAAAACTAACTCTCAACACTCGCAAACTCAGACAAGCTCACCTTCTAGATCAGTTTCCTCCCCAACTCCACCTGTGCTGTACTCAGCCATTGTCCAACGAATTCCACCACAATATGCCAATCAGAAGGACTTTTACAATGCGATTCGCGCATGCGCCCCCAACATTCTAACTAAATCCGTCGTCGTCTATAAACTAGGTACCCCCCTTATAATTTCCGACCCTACACCTAAATCTATGGCCCCGAGGCTTCCACGCCCCCCCGCCTCCTTCTCCTGCGTCATCAAAGGCGTAGACCTCAACGTTTCTGTCGAGGACATTAAATCCGAGCTACAACCTAGACGTCAGCAACCTCTGGCGCATCAGAGCCCGCGCCACTAA
- Protein Sequence
- MVRNYQRKTNRQNWSSEYMTRAVDAVIAGELGYKRAADTFSVPSSTLERYVKKRRENGSSTIDKAAGKFNPVFTAEQESELALHLIDLQRRLFSVTLKELRELAFQLAEKNNYIEFQSTSNDVSDNTQSLDLTTAIRQNDLPFTLETAEIEPRPACSWMPDDRAPENLNTSFLCVSPKDVIPLPKVQAGQKRATRKRGKTTILTASPYKSQLKETKEKMESTKKAKLERIRRKLLSDADKKIDTNRKGKTNSQHSQTQTSSPSRSVSSPTPPVLYSAIVQRIPPQYANQKDFYNAIRACAPNILTKSVVVYKLGTPLIISDPTPKSMAPRLPRPPASFSCVIKGVDLNVSVEDIKSELQPRRQQPLAHQSPRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -