Eaen029762.1
Basic Information
- Insect
- Elmis aenea
- Gene Symbol
- -
- Assembly
- GCA_947652605.1
- Location
- OX393577.1:24205787-24217366[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-11 6.3e-09 36.3 0.0 1 39 289 328 289 332 0.90 2 4 1.6e-12 5.6e-10 39.7 0.1 1 39 343 381 343 385 0.95 3 4 8.6e-17 3e-14 53.3 0.0 1 45 398 443 398 443 0.97 4 4 6.1e-16 2.1e-13 50.6 0.0 1 39 450 489 450 493 0.94
Sequence Information
- Coding Sequence
- ATGGCGCTAAAAAAACTGGAAAACAAATGTATAAAAAATATATTAAGGTCACTGCTAAAAACTGCCGACCAGCTAAAAATCAAAGGCCTTTGTGAATCAGAAGAAAAAGAAAATTCAACTCCGTTTACTTTTGCACCGAGAGGTTGCCCGAAAATCTGCAAAATATCCACACTCAAACATTTTAGATCAGTAGATAATAACAGAAAGCACAGATATAAAGAAATTGAAAACGATAATTTATCAGATGTAGAGGAAATAGAACAGAAACATATAATTCATACAGAATTAACAGATGAAGAAGACAGTGATACGCCATTAATAGTTGATGAAGGACCAAAAAGGAAGAAATTGATACCAACACAGACCAAGCCGCTTAACATGAGCAGTCATGGTCTATTGGCAGGACAGGCTATATTCTCTCAGTTGTGTGATAACGATGATTTTCCACCGGAGCCACCAGCCCCCGCGGCCACACCTGTTGGTCACGTAGATTTACAAGATCATTCGCCTACAAGAACACTTCTTACCTCATCACATAGAACAGATTTATCAGATGTACATATAAAATATGAAGATATCAAAAAAGAGTGCACAATTAAATTTGAAACATTAAGATCGTATGACCATGATTCAATGATGGACATGGATACTTCACATTTATCAGGACCTGACCATTCGATGGAAAGTCATGAGGATGCAGAGAGAGGAATGCACGCCATGATGGTTACACCAGAGCTATTGGGAATGTTGCCTGGTGCTTCTGGAAGATTAGAGTCACCAAACCCCAATGATTCTGCTCAAAAAAGTAATGGACATTCAGACGGCTTAACAAACCGATCACACGGAGGTGGACCAAAAACTTGGACACAGGAAGATATGGAATTAGCTTTAGATGCCTTAAGAAATCACAATATGAGCCTTACAAAGGCATCAGCTACATATGGAATACCATCAACTACATTGTGGCAAAGAGCTCATAGACTAGGAATAGATACACCAAAAAAAGAAGGCCCCACTAAATCTTGGACTGAAGAAAATTTGAATTCTGCTTTGGAAGCCTTAAGGACGGGCACTATTTCAGCTAACAAAGCCAGTAAAGCATATGGTATACCTAGTAGTACGTTATATAAAATAGCTAGAAGAGAAGGTATCAAATTAGCAGCTCCATTCAATGCCGCTCCGACGACATGGTCACCAGAGGATTTGGAAAAAGCTCTTGAATCAATACGATCTGGGCAGTCATCAGTACAGAAAGCTTCGACAGAATTTGGTATTCCAACTGGCACATTATATGGTCGATGTAAAAGAGAAGGTATTGAATTATCACGATCAAATCCTACTCCATGGTCAGAAGATGCAATGGGGGAAGCCTTAGAAGCAGTTAGATTGGGTCATATGTCTATAAACCAAGCGGCGATACATTATAACCTGCCATACTCATCTCTTTACGGAAGGTTTAAAAGGGGCATCAAATATGACTCTGAAACGATCGAATCAAACAACTCAGACAGCCAATCGCAATCAGAGTCGCAGGTACTTGTAATGGATTATCCAAATTCACACCAACAAATTCAGTATCAACATCATCCGAACAGCTGA
- Protein Sequence
- MALKKLENKCIKNILRSLLKTADQLKIKGLCESEEKENSTPFTFAPRGCPKICKISTLKHFRSVDNNRKHRYKEIENDNLSDVEEIEQKHIIHTELTDEEDSDTPLIVDEGPKRKKLIPTQTKPLNMSSHGLLAGQAIFSQLCDNDDFPPEPPAPAATPVGHVDLQDHSPTRTLLTSSHRTDLSDVHIKYEDIKKECTIKFETLRSYDHDSMMDMDTSHLSGPDHSMESHEDAERGMHAMMVTPELLGMLPGASGRLESPNPNDSAQKSNGHSDGLTNRSHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWSPEDLEKALESIRSGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSETIESNNSDSQSQSESQVLVMDYPNSHQQIQYQHHPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00003877;
- 90% Identity
- -
- 80% Identity
- -