Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:14280529-14291024[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.038 21 6.0 0.8 5 41 234 267 233 268 0.91

2 15 0.0012 0.67 10.9 0.5 17 41 274 295 268 297 0.89

3 15 0.23 1.3e+02 3.5 2.4 17 41 302 323 296 325 0.82

4 15 0.19 1.1e+02 3.8 0.4 18 41 331 351 325 353 0.84

5 15 0.26 1.5e+02 3.4 3.0 13 41 354 379 347 381 0.76

6 15 2 1.1e+03 0.5 0.7 17 41 386 407 380 409 0.82

7 15 0.02 11 6.9 3.0 14 38 411 436 399 440 0.77

8 15 0.047 26 5.7 3.7 15 38 440 464 432 465 0.76

9 15 0.041 23 5.9 3.5 15 38 468 492 460 493 0.76

10 15 0.61 3.4e+02 2.2 0.1 18 41 499 519 496 521 0.84

11 15 0.35 2e+02 2.9 0.4 14 41 523 547 515 549 0.79

12 15 0.24 1.3e+02 3.5 0.4 14 41 551 575 543 577 0.80

13 15 0.038 22 6.0 1.7 14 41 579 603 571 605 0.79

14 15 0.036 20 6.1 4.1 14 41 607 631 599 633 0.82

15 15 0.02 11 6.9 2.2 17 30 638 653 630 661 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.038	21	6.0	0.8	5	41	234	267	233	268	0.91
2	15	0.0012	0.67	10.9	0.5	17	41	274	295	268	297	0.89
3	15	0.23	1.3e+02	3.5	2.4	17	41	302	323	296	325	0.82
4	15	0.19	1.1e+02	3.8	0.4	18	41	331	351	325	353	0.84
5	15	0.26	1.5e+02	3.4	3.0	13	41	354	379	347	381	0.76
6	15	2	1.1e+03	0.5	0.7	17	41	386	407	380	409	0.82
7	15	0.02	11	6.9	3.0	14	38	411	436	399	440	0.77
8	15	0.047	26	5.7	3.7	15	38	440	464	432	465	0.76
9	15	0.041	23	5.9	3.5	15	38	468	492	460	493	0.76
10	15	0.61	3.4e+02	2.2	0.1	18	41	499	519	496	521	0.84
11	15	0.35	2e+02	2.9	0.4	14	41	523	547	515	549	0.79
12	15	0.24	1.3e+02	3.5	0.4	14	41	551	575	543	577	0.80
13	15	0.038	22	6.0	1.7	14	41	579	603	571	605	0.79
14	15	0.036	20	6.1	4.1	14	41	607	631	599	633	0.82
15	15	0.02	11	6.9	2.2	17	30	638	653	630	661	0.73

Sequence Information

Coding Sequence: ATGGAGGAATTGTGCACAGCTTGCCTGTGCATCGGAAGAAATCTGTATTATATTGGCGATACGGATGTTTTTGGTCTTTACTCGCAAATTTTGAATGAAATATCTGTATACAACCCGTCAGAGATATGTGTCCGCGTCTGCTGGGAGTGCCGGGCCTTGCTGCGGCGGCTGCAGAGGTTCCGGCGCCAGGTTCAGCAGTCTTACCAACTGCTCACTCAAGTACATGCAAACAGCACACTCAGTATCGCGCGCCCCCCGCACCTCAATGTCCAGTGCATCACGAGCATCTCTCTCCCGTTTGATGACATCATACTCAAGCCGGAACCTGATGCACCTGATGCGGAAGCAGACACGCCGGAGGTGGATGGTGTGCCGGAAGTGAAGAGTGAGCCCGAGGACGACACCGAGCATTGTGAGGAGACGTTTGTGAACGCTTTCGACGTGGAACAGCCGGAACACCTACAAACTAAGAGCAAGATTACAGAAAAATCAGTATCCCGGATCGACCGCTCGGCCATTGGCTCGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCTGCCAAAACCGATCATGGTCAAAACTGAGCCGGAGTCAGAGGATGCTGGCGACACCGCGACAGACGATGAGGATTCAGCGGATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGAAACAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACcagtgccatgtttgtctgagggggtttcagttgaagagtaacctacaaagacacttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaaggaatttaatgcaaagagtaatttagaaacacatttaagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgttcacagcagtgcattaacaaaacatctgagaactcacactggtgagaagccacatatatgtaatgactgtggcaagcaatttattcaaaagggtaatttagacaaacacttaagaactcacactggtgagaagctatataaatgtaatgattgtggcaaggaattaattgtaaaaggtactttaaaaacccatttaagaacacacactggtgagaaaccatttgaatgcaaggtttgtcgtcgtcgatttgctcaaaacagtgcattcaaaattcacttgaggactcatactggcgagaagccatataaatgtaatgactgtggcaagcaatttaatcgaaagggtcatttagatacacatttaagaactcatactggcgagaagccatataaatgtaatgactgtggcaagcaatttaatcgaaagggtcatttagatacacatttaagaactcatactggtgagaagccatataaatgtaatgactgtggcaagcaatttaatcgaaagggtcatttagatacacatttaagaactcacactggtgtgaagccatataaatgtaatgattgtggcaagccatttactctaaagggtaatttagatgcacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaagccatttactctaaagggtaatttagatgcacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggccagcaatttactctaaagggtaatttagatgcacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaaggaatttaatgtaaaaggtactttaaacagacatttaagaacacacactggtgaaaaaccatttgaatgtgatgtttgcgaaaagcagtttagtcacaaaagtcatttaaaaactcatttaagaactcacactggtgagaagccatataaatgtaataactgtggcaagcaatttaatcgaaagggttatttagatacacatttaagaactcacactgATGACACAGCAGAGGGACAACCTCGTGTAGCAGGAAGTTCACGAAACCGTCTTGATTACTGTTTCGTGAACTTCCTGCCGCAGGTTGTTGACCAGCCTCAGAGAGACCCGCGCGCACAAACGCTGACACAAGGCACCAGCGCCATGTTTGTCTGA
Protein Sequence: MEELCTACLCIGRNLYYIGDTDVFGLYSQILNEISVYNPSEICVRVCWECRALLRRLQRFRRQVQQSYQLLTQVHANSTLSIARPPHLNVQCITSISLPFDDIILKPEPDAPDAEADTPEVDGVPEVKSEPEDDTEHCEETFVNAFDVEQPEHLQTKSKITEKSVSRIDRSAIGSCASLSFSVAECCDSTLPKPIMVKTEPESEDAGDTATDDEDSADGAAEGQQPVAGSSRNSYYGEPQSADTRHQCHVCLRGFQLKSNLQRHLRTHTGEKPYKCNDCGKEFNAKSNLETHLRTHTGEKPFECKVCRRRFVHSSALTKHLRTHTGEKPHICNDCGKQFIQKGNLDKHLRTHTGEKLYKCNDCGKELIVKGTLKTHLRTHTGEKPFECKVCRRRFAQNSAFKIHLRTHTGEKPYKCNDCGKQFNRKGHLDTHLRTHTGEKPYKCNDCGKQFNRKGHLDTHLRTHTGEKPYKCNDCGKQFNRKGHLDTHLRTHTGVKPYKCNDCGKPFTLKGNLDAHLRTHTGEKPYKCNDCGKPFTLKGNLDAHLRTHTGEKPYKCNDCGQQFTLKGNLDAHLRTHTGEKPYKCNDCGKEFNVKGTLNRHLRTHTGEKPFECDVCEKQFSHKSHLKTHLRTHTGEKPYKCNNCGKQFNRKGYLDTHLRTHTDDTAEGQPRVAGSSRNRLDYCFVNFLPQVVDQPQRDPRAQTLTQGTSAMFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640649;
90% Identity: iTF_00640649;
80% Identity: iTF_00640649;