Esim011466.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- -
- Assembly
- GCA_947532085.1
- Location
- OX383950.1:13732122-13739631[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 9.7 5.4e+03 -1.7 0.5 16 26 15 25 10 32 0.80 2 11 0.025 14 6.6 0.8 5 41 161 194 161 196 0.91 3 11 0.0011 0.63 10.9 0.5 17 41 201 222 195 224 0.89 4 11 1 5.7e+02 1.5 1.7 17 41 229 250 223 252 0.84 5 11 0.0025 1.4 9.8 0.9 14 41 254 278 244 280 0.83 6 11 0.084 47 4.9 1.4 17 31 285 298 279 307 0.76 7 11 0.03 17 6.4 2.3 12 41 308 334 302 336 0.84 8 11 0.091 51 4.8 4.0 17 40 341 361 335 364 0.77 9 11 0.17 96 3.9 4.0 16 41 368 390 357 392 0.82 10 11 0.002 1.1 10.2 0.3 19 40 399 417 393 420 0.90 11 11 0.21 1.2e+02 3.7 5.1 6 37 415 446 410 448 0.71
Sequence Information
- Coding Sequence
- ATGGAAGGATATGGAGATAAACTCGTGAGTGGGAACAGGCCCGTGGCGGCGTGCTACATCTGCCGCGCTATGTTGTGCAAGAGCCACAAGCTGATGGTGACCGCCACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAACAATCAGTATCCCGGATTGACCGCTCGGCCATTGGCTTGTGCGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCTGCCAAAACCGGTCATGGTCAAAACTGAGCCAGAGTCAGAGGATGCAGGCGACACCGCGACGGACGATGAGGACCCAGCGGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCGATGAATACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGGTGAAAGTAACAAATGTTTTGCAGATGGCGCAGCAGAGGGTCAACAGCCTGTGGCAGGAAGTTACCGAAACAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACCAGTGCCATGTTTGTCTGAGGGGGTTTCAGTTGAAGAGTAACCTACAAAGACACTTAAGAACTCACACTGGTGAGAAGCCATATAAATGTAATGATTGTGGCAAGGAATTTAATGAAAAGAGTAATTTAGAAACACATTTAAGAACTCACACTGGTGAGAAACCATTTAAATGTAAGGTTTGTCGTCGTCGATTTGCTCAAAACAGTGCATTAAAAATTCACTTGAGAACTCATACTGGTGAGAAGCCATATAAATGCAATGACTGTGGCCAGCAATTTAGTCGAAAGGATAATTTAGATACACATTTAAGAACTCACACTGGTGAGAAGCCATATAAATGTAATGCTTGTGGCAAGGAATTTAAGGTAAAAGGTACTTTAGAAATACATTTAAGGACACACACTGATGAGAAACCATTTGAATGTAAGGTTTGTCGTCGTCGATTTGCCCACAACAGTACATTAAAAACACACCTGAGAACTCACACTGGTGAGAAGCCATATAAATGTAATGATTGTGGCAAGCAATTTAATCAAAAGGGTAATTTACATTGTCATTTAAGAACTCACACTGGTGAGAAACCATTTGCATGTAATGATTGTGGCAAGCAATTTAATCACAAGAGTGATTTAGACAGACATTTAAGAACTCACACTGGCGAGAAACCATTTGGATGTAATGTTTGCGAAAAGCAGTTTAGTGGCAAAAGTTATTTAAAAACTCATTTAAGAATTCACACTGGTGAGAAACCATTTGAATGTTATGTTTGCGAAAAGCAGTTTAGTCACAAATATCATTTAAAAACTCATTTAAGAACGCACACTGGTGAGAAACCATTTGAATATGACACAGCAGAGGGCCAACAGCGTGTAGCAGGAAGTTCACGAAACCGTCTTGATTACTGTTTCGTGAACTTCCTGCCGCAGGTTGTTGACCAGCCTCAGAGAGACCCGCGCGCGCAAACGCTGACACAAGGCACCAGCGTCATGTTTGTCTGA
- Protein Sequence
- MEGYGDKLVSGNRPVAACYICRAMLCKSHKLMVTATRADHALTAMLETAGEITEQSVSRIDRSAIGLCASLSFSVAECCDSTLPKPVMVKTEPESEDAGDTATDDEDPAGVPAADVDETRDSDEYAGARGGGHYADGESNKCFADGAAEGQQPVAGSYRNSYYGEPQSADTRHQCHVCLRGFQLKSNLQRHLRTHTGEKPYKCNDCGKEFNEKSNLETHLRTHTGEKPFKCKVCRRRFAQNSALKIHLRTHTGEKPYKCNDCGQQFSRKDNLDTHLRTHTGEKPYKCNACGKEFKVKGTLEIHLRTHTDEKPFECKVCRRRFAHNSTLKTHLRTHTGEKPYKCNDCGKQFNQKGNLHCHLRTHTGEKPFACNDCGKQFNHKSDLDRHLRTHTGEKPFGCNVCEKQFSGKSYLKTHLRIHTGEKPFECYVCEKQFSHKYHLKTHLRTHTGEKPFEYDTAEGQQRVAGSSRNRLDYCFVNFLPQVVDQPQRDPRAQTLTQGTSVMFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640676;
- 90% Identity
- iTF_00640676;
- 80% Identity
- iTF_00640676;