Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:16199166-16203309[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.1 1.7e+03 -0.1 0.1 17 22 6 11 2 14 0.83

2 16 7.8 4.4e+03 -1.4 0.1 16 26 45 55 39 62 0.80

3 16 0.035 20 6.1 0.9 5 41 183 216 182 218 0.92

4 16 0.0011 0.59 11.0 0.5 17 41 223 244 217 246 0.90

5 16 0.14 81 4.2 2.9 17 41 251 272 245 274 0.82

6 16 0.17 93 4.0 0.4 18 41 280 300 273 302 0.83

7 16 0.18 1e+02 3.9 2.6 14 38 304 325 296 330 0.68

8 16 0.37 2.1e+02 2.9 4.2 15 41 333 356 324 358 0.80

9 16 0.15 81 4.2 0.6 18 41 364 384 357 386 0.83

10 16 0.062 35 5.4 2.9 10 40 385 411 380 414 0.71

11 16 1.8 9.9e+02 0.7 1.0 17 41 419 440 411 442 0.81

12 16 0.00084 0.47 11.3 0.8 14 41 444 468 433 469 0.82

13 16 0.02 11 7.0 0.2 18 41 476 496 473 498 0.87

14 16 0.013 7.3 7.5 0.7 14 41 500 524 492 526 0.81

15 16 0.27 1.5e+02 3.3 0.7 17 38 531 553 526 557 0.80

16 16 0.049 28 5.7 2.2 14 41 556 580 548 581 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.1	1.7e+03	-0.1	0.1	17	22	6	11	2	14	0.83
2	16	7.8	4.4e+03	-1.4	0.1	16	26	45	55	39	62	0.80
3	16	0.035	20	6.1	0.9	5	41	183	216	182	218	0.92
4	16	0.0011	0.59	11.0	0.5	17	41	223	244	217	246	0.90
5	16	0.14	81	4.2	2.9	17	41	251	272	245	274	0.82
6	16	0.17	93	4.0	0.4	18	41	280	300	273	302	0.83
7	16	0.18	1e+02	3.9	2.6	14	38	304	325	296	330	0.68
8	16	0.37	2.1e+02	2.9	4.2	15	41	333	356	324	358	0.80
9	16	0.15	81	4.2	0.6	18	41	364	384	357	386	0.83
10	16	0.062	35	5.4	2.9	10	40	385	411	380	414	0.71
11	16	1.8	9.9e+02	0.7	1.0	17	41	419	440	411	442	0.81
12	16	0.00084	0.47	11.3	0.8	14	41	444	468	433	469	0.82
13	16	0.02	11	7.0	0.2	18	41	476	496	473	498	0.87
14	16	0.013	7.3	7.5	0.7	14	41	500	524	492	526	0.81
15	16	0.27	1.5e+02	3.3	0.7	17	38	531	553	526	557	0.80
16	16	0.049	28	5.7	2.2	14	41	556	580	548	581	0.78

Sequence Information

Coding Sequence: ATGCATCAGAGTCCAGCAGTTTGCCGTATCTGCCTCGCAGTGGACGCGCCCATGATCAACATTGACGACACTGCCCTGCAACTCGTGTACGAGAGGCTGACGGGGGCTTTTCTCGTGAGTGGAAACAGGCCCGTGGCAGCATGCTACATCTGCCGCGCTATGCTGTACAAGAGCCACAAGCTGATGGTGACCGCCACCAGGGCAGACAATGTGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAAAAGTCGATATACCTGATTGACCGCGAGGCCATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAACCGAGCCGGAGTCTCAGGATGCTTTCGACACTGCGACAGACAATGAGGATCCAGCGGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCGATGAAGACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGAAACAGTTATTATAGCGAGCCTCAGAGCGCTGACACAAGGCACcagtgtcatgtttgtctgagggggtttcagtggaagagtaacctacaaagacacttaagaactcactctggtgagaagccatataaatgtaatgattgtggcaaggaatttaatgcaaagagtaatttagaaacacatttaagaactcacactggtgagaaaccatttaaatgtaaggtttgtcgtcgtcgatttgctcacagcagtgcattaacaaaacatctgagaactcacactggtgagaagccatatatatgtaatgactgtggcaagcaatttattcaaaaggttaatttagacaaacacttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaaggaatttaatgtaaaaggtactttaggaacacatttaagaacacacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctcacagcagtgcattaacaaaacatctgagaactcacactggtgagaagccatatatatgtaatgactgtggcaagcaatttattcaaaagggtaatttagacaaacacttaagaactcacactggtgagaagcgatataaatgtaatgattgtggcaaggaatttaatgtaaaaggtactttagaaacacatttaagaacacacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctcaaaacagtgcattcaaaattcacttgagaactcatactggtgagaagccatataaatgtaatgactgtggcaagcaatttaaccgaaaggataatttagatactcatttaagaactcacactggtgtgaagccatataaatgtaatgattgtggccagcaatttactcgaaagggtaatttagatgcacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggccagcaatttactcgaaagggtaatttagatgcacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggccagcaatttaatcaaaagggtcatttagatagtcatttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaaggaatttaatgtaaaaggtactttaaacagacatttaagaacacacactggtgaaaaaccatttgagtgtaatAGACCGGCGGCCGGTGGCAGGACTTCCTACCTCATAAGATACCCGAATGAGACTAGTATGTAG
Protein Sequence: MHQSPAVCRICLAVDAPMINIDDTALQLVYERLTGAFLVSGNRPVAACYICRAMLYKSHKLMVTATRADNVLTAMLETAGEITEKSIYLIDREAIGLCASLSFSVAECCDSTPPARVAVKTEPESQDAFDTATDNEDPAGVPAADVDETRDSDEDAGARGGGHYADDGAAEGQQPVAGSSRNSYYSEPQSADTRHQCHVCLRGFQWKSNLQRHLRTHSGEKPYKCNDCGKEFNAKSNLETHLRTHTGEKPFKCKVCRRRFAHSSALTKHLRTHTGEKPYICNDCGKQFIQKVNLDKHLRTHTGEKPYKCNDCGKEFNVKGTLGTHLRTHTGEKPFECKVCRRRFAHSSALTKHLRTHTGEKPYICNDCGKQFIQKGNLDKHLRTHTGEKRYKCNDCGKEFNVKGTLETHLRTHTGEKPFECKVCRRRFAQNSAFKIHLRTHTGEKPYKCNDCGKQFNRKDNLDTHLRTHTGVKPYKCNDCGQQFTRKGNLDAHLRTHTGEKPYKCNDCGQQFTRKGNLDAHLRTHTGEKPYKCNDCGQQFNQKGHLDSHLRTHTGEKPYKCNDCGKEFNVKGTLNRHLRTHTGEKPFECNRPAAGGRTSYLIRYPNETSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640650;
90% Identity: iTF_00640650;
80% Identity: iTF_00640650;