Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:16870883-16889002[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 6.8 3.8e+03 -1.2 0.1 16 26 55 65 47 72 0.79

2 11 0.36 2e+02 2.9 2.7 5 41 192 225 191 227 0.92

3 11 0.021 12 6.9 1.4 18 41 233 253 229 255 0.88

4 11 0.087 49 4.9 4.2 13 41 256 281 247 282 0.78

5 11 5.9e-05 0.033 15.0 2.0 1 41 273 309 273 313 0.92

6 11 0.05 28 5.7 2.7 13 38 312 338 309 342 0.85

7 11 0.00038 0.21 12.5 0.8 17 41 344 365 339 367 0.89

8 11 0.011 6.3 7.7 2.2 18 37 373 389 366 395 0.74

9 11 0.19 1.1e+02 3.8 5.6 15 37 398 421 390 423 0.72

10 11 0.014 7.7 7.5 4.4 17 41 428 449 420 450 0.87

11 11 0.021 12 6.9 0.4 18 41 457 477 454 478 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	6.8	3.8e+03	-1.2	0.1	16	26	55	65	47	72	0.79
2	11	0.36	2e+02	2.9	2.7	5	41	192	225	191	227	0.92
3	11	0.021	12	6.9	1.4	18	41	233	253	229	255	0.88
4	11	0.087	49	4.9	4.2	13	41	256	281	247	282	0.78
5	11	5.9e-05	0.033	15.0	2.0	1	41	273	309	273	313	0.92
6	11	0.05	28	5.7	2.7	13	38	312	338	309	342	0.85
7	11	0.00038	0.21	12.5	0.8	17	41	344	365	339	367	0.89
8	11	0.011	6.3	7.7	2.2	18	37	373	389	366	395	0.74
9	11	0.19	1.1e+02	3.8	5.6	15	37	398	421	390	423	0.72
10	11	0.014	7.7	7.5	4.4	17	41	428	449	420	450	0.87
11	11	0.021	12	6.9	0.4	18	41	457	477	454	478	0.83

Sequence Information

Coding Sequence: ATGACAATAAAGCAATCAAACGGAGGTAGAGGACTGACTGATATCCAGGAACATCTTTTTCCTGAACTGATAGCTATTCAGGAACAAATCATCAATACTAAAAACTACCGCAAACATATTATAAAAGATCCCTCCATTACACTTGTGAGTGGGAACAGGCCCGTGGCGGCGTGCTACATCTGCCGCGCTATGTTGTACAAGAGCCACAAGCTGATGGTGACCGCCACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAAAAATCAGTTTCCCGGATTGACCGCGAGGCCATTGGCATGTGTGCGTCGCTTTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCTGGCAAAACTGGTCATGGTCAAAACTGAGCCGGAGTCAGAGGATGCTGACACCGCGACGGACAATGAGGATCCAGCCGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCGATGAAGACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGAAACAGTTATTATggcgagcctcagagcgctgacacaaggcaccagtgtcatgtttgtctgagggagtttcagtgtaagagtaaactacaaagacatttacgaactcacactggtgcgaaaccatttgaatgtaatgtttgcgaaaagcagtttagtcacataggtcatttaaaagctcatttaagaactcacactggtgagaaaccatataaatgttatgattgtggcaagcaatttaatcgaaaggataatttaaaatcacatttcagaacacacactggtgagaaaccattcgaatgtaagttttgtcgtcgtcgatttgctgacagcagtgcattaacaagacatctgagaactcacacttgtgagaaaccatttgcatgtaaaatttgcgataagcagtttaatcacaaatatcatttaaacgttaatttaagaactcatactggtgagaagccatataaatgtaatgactgtggcaagcaatttaatcgaaagggtaatttagaaagacatttaagaactcacactggtgataaaccatttgaatgtaatgtttgcgaaaagcagtttagtaacaaacatcatttaaacgttcatttaagaactcacactggtgagaaaccatttgaatgtaatgtttgcgtaaagcagtttagtcaaaaatgtcatttaaaaactcatttaagaactcacactggtgagaaaccatttgaatgtaagatttgtcgtcgtcgatttactcgcaacagtacattaaaaacacacctgagaactcacactggtatgaagccatataaatgtaatgactgtggcaagcaatttaatcaaaagggtagtttagaaagacatttaagaactcacactggtgataaaccatttgaatttaagTCGAACAATGGGTTTACGACGCGCAGACGCGGATACACAGCGACGCGCGGAAGTGGCACTCGCGGTGCGCCGCACTCGGCACGCGCCGCGCCCGACATGCGTGGACGAGGTTCTATGAGAGGCCATCATGCACCTCGCGTTCAGCACACTCAGTGTGATGCTGTAGAACCAGCACAGACTGAGAATCAGTCGTCTCTTCCGAATAAGAATGACACAGCAGAGGGCCAACAGCGTGTAGCAGGAAGTTCACGAAACCGTCTTGATTACTGTTTCGTGAACTTCCTGCCGCAGGTTGTTGACCAGCCTCAGAGAGACCCGCGCGCGCAGAACGTCATGTTTGTCTGA
Protein Sequence: MTIKQSNGGRGLTDIQEHLFPELIAIQEQIINTKNYRKHIIKDPSITLVSGNRPVAACYICRAMLYKSHKLMVTATRADHALTAMLETAGEITEKSVSRIDREAIGMCASLSFSVAECCDSTLAKLVMVKTEPESEDADTATDNEDPAGVPAADVDETRDSDEDAGARGGGHYADDGAAEGQQPVAGSSRNSYYGEPQSADTRHQCHVCLREFQCKSKLQRHLRTHTGAKPFECNVCEKQFSHIGHLKAHLRTHTGEKPYKCYDCGKQFNRKDNLKSHFRTHTGEKPFECKFCRRRFADSSALTRHLRTHTCEKPFACKICDKQFNHKYHLNVNLRTHTGEKPYKCNDCGKQFNRKGNLERHLRTHTGDKPFECNVCEKQFSNKHHLNVHLRTHTGEKPFECNVCVKQFSQKCHLKTHLRTHTGEKPFECKICRRRFTRNSTLKTHLRTHTGMKPYKCNDCGKQFNQKGSLERHLRTHTGDKPFEFKSNNGFTTRRRGYTATRGSGTRGAPHSARAAPDMRGRGSMRGHHAPRVQHTQCDAVEPAQTENQSSLPNKNDTAEGQQRVAGSSRNRLDYCFVNFLPQVVDQPQRDPRAQNVMFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640680;
90% Identity: iTF_00640680;
80% Identity: iTF_00640680;