Esim011666.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- -
- Assembly
- GCA_947532085.1
- Location
- OX383950.1:16512152-16513333[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.029 16 6.4 1.5 12 30 53 71 46 75 0.80 2 11 0.0029 1.6 9.6 1.9 5 41 75 107 72 109 0.91 3 11 0.0072 4.1 8.3 3.5 1 38 99 136 99 137 0.85 4 11 0.00042 0.24 12.3 1.3 3 40 129 162 127 165 0.80 5 11 0.093 52 4.8 2.3 14 41 167 191 159 193 0.77 6 11 0.0012 0.65 10.9 0.8 17 41 198 219 193 221 0.78 7 11 0.03 17 6.4 6.0 14 41 223 247 215 249 0.83 8 11 1.2 6.6e+02 1.3 9.1 14 41 279 303 248 305 0.88 9 11 0.027 15 6.5 1.4 17 38 310 332 304 336 0.81 10 11 0.23 1.3e+02 3.5 3.1 14 41 335 359 327 361 0.82 11 11 0.059 33 5.4 7.0 3 41 353 387 351 388 0.79
Sequence Information
- Coding Sequence
- ATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGAAACAGTTATTAGGCTCGCCAAGCCTCAGAGCGCTGACACAAGGCACcggtgtcatgtttgtctgaggggatttcagtggaagggtcagctacaagtacacttaagaactcacacttgtgagaagccatataaatgtaatgattgtggcaagcaatttaatgaaaaaggtactttggaatcacatttcagaatacatactggtgagaaaccatatcagtgtaagttttgtcgtcgtcgatttgctgacagcagtgcagtaaaaagacatatgagaactcacactggtgagaagccatataaatgtaatgactgtggcaagcaattgaatcaaaaggttcatttaaaatcacattttagaacacatactggtgagaagccatataaatgtaatgattgtggcaagcaatttagtcaaaagggtgctttagaatcacatttaagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgacgacgatttgctgacaacagtacattaacaaaacatctgagaactcacactggtgagaagccgtataaatgtaatgtttgtggcaagcaatttaatcaaaagggtactttacaatcacatttaagaacacatactggtgagaaaccatttgaatgtaatgtttgcgaaaagcagtttagtcacaaatgtaatttaaaagttcatttaagaactcacactggtgagaagccatataaatgtaatgattgttgcaagcaatttaatcaaaagggtgatttagaatcacatttaagaacacacactggtgagaaaccatttgaatgtaaggtttgtcgacgtctatttgctgacagcagtacattaaaaagacatttaagaactcacactggtgagaagccatataaatgtaatgactgtggcaagcaatttaatcaaaaagttcatttagaatcacatttaagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgacgtcgatttgctgacagcagtacatataaaagacatttaagaacgcacactggtgaaaagccatataaatgtaataactgtggcaagcaatttagtgttaagtgtaatttagaaacacatttaagaacacacactggtgaaaaaccataa
- Protein Sequence
- MAQQRANSLWQEVPETVIRLAKPQSADTRHRCHVCLRGFQWKGQLQVHLRTHTCEKPYKCNDCGKQFNEKGTLESHFRIHTGEKPYQCKFCRRRFADSSAVKRHMRTHTGEKPYKCNDCGKQLNQKVHLKSHFRTHTGEKPYKCNDCGKQFSQKGALESHLRTHTGEKPFECKVCRRRFADNSTLTKHLRTHTGEKPYKCNVCGKQFNQKGTLQSHLRTHTGEKPFECNVCEKQFSHKCNLKVHLRTHTGEKPYKCNDCCKQFNQKGDLESHLRTHTGEKPFECKVCRRLFADSSTLKRHLRTHTGEKPYKCNDCGKQFNQKVHLESHLRTHTGEKPFECKVCRRRFADSSTYKRHLRTHTGEKPYKCNNCGKQFSVKCNLETHLRTHTGEKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640655;
- 90% Identity
- iTF_00640655;
- 80% Identity
- iTF_00640655;