Esim011537.2
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- -
- Assembly
- GCA_947532085.1
- Location
- OX383950.1:14638227-14649917[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 8.5 4.7e+03 -1.5 0.1 16 26 45 55 39 62 0.81 2 11 2.5 1.4e+03 0.2 0.4 5 29 212 236 210 247 0.77 3 11 0.0021 1.2 10.1 0.7 15 41 250 273 241 275 0.79 4 11 0.011 6.3 7.7 3.3 13 41 276 301 269 302 0.83 5 11 0.0016 0.9 10.4 4.6 5 41 325 357 324 359 0.90 6 11 0.034 19 6.2 2.6 14 38 361 386 352 390 0.76 7 11 0.024 14 6.7 1.1 17 38 392 414 387 415 0.78 8 11 0.0054 3 8.8 1.0 17 41 420 441 412 443 0.87 9 11 0.14 78 4.2 2.0 17 41 448 469 444 471 0.84 10 11 0.041 23 5.9 3.2 17 41 476 497 469 512 0.80 11 11 6.6e-05 0.037 14.9 0.5 1 41 517 553 517 554 0.92
Sequence Information
- Coding Sequence
- ATGCATCAGAGTCCAGCATTCTGCCGTATCTGCCTCTCAATGGGCGCGCCCATGAGCAACATTGACGGCACTGCCCTGCAACTCGTGTATGAGAGACTTGCGGGGGCTCTTCTTGTGAGTGGGAACAGGCCCGTGGCGGCGTGCTACATCTGCCGCGCTATGTTGTACAAGAGCCACATGCTGATGGTGACCGCCACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAAAAATCAGTATCCCGGATTGACCGCGAGGCCATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGTTCAAAACCGAGCCGGAGTCAGAGGATGCTGGCGACACCGCGACGGACGATGAGGATCCAGGGGAAAAGCCGACATCCGCGATTGGCCGCTCGGCCATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAACCGAGCCGGAGTCAGAGGATGCTGGCGACACCGCGACGGACGATGAGGATCCAGGGGATGGCGCAGCAGAGGGCCAACAGTCTGTGGCGGGCAGTTCCCGACACAGTTATTATggcgagcctcagagcgctgacacaaggcaccagtgtcatgtttgtctgagggggtttcagatcaagggtcatctacaagtacacttaagaactcacactggtgagaagccatataaatgtaatgcctgtggcaagcaatttagtcgaatgggtgatttagaaagacatttaagaactcacactggtgagaaacgatatcagtgtaagttttgtcgtcgtcgatttgcttacagcagtgcagtaaaaagacatctgagaactcacactggtgagaaaccatataaatgtaatgatagtggcaagcaatttaatgaaaaaggtactttggaatcacatttcagaactcacactggtgaaaaaccatttgagtgtaatgtttgcgaaaagcagtttagtcacaaacatcatttaaaagctcatttaagaactcatactggtgagaagccatttaaatgtaatgattgtggcaagcaatttaatggaaagggtcatttagatacacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaagcaatttaatggaaagggtcatttagatacacatttaagaactcacactggcgagaagccatacaaatgtaatgattgtggcaagcaatttaatgtaaagggtaatttagaaagacatttaagaactcaccctggtcaaaaactattagaatgtaagatttgtcgtcgtcgatttgctcaaaacagtacattaaacacacacttgagaactcatactggtgagaagccatttaaatgtaatgattgtggcaaggaatttaatggaaagggtaatttagatacacatttaagaactcacactggtgagaaaccatttgaatgtaatgtttgtcgtcatcgatttgctaaaaacagtgcattaaaagatcacttcagaactcatactggtgagaagccatataaatgtaatgattgcggcaagcaatttaatgtaaagggtaatttagaaagacatttaagaactcatactggtcagaaactattagaatATGACACAGCAGAGGGCCAACAGCGTGTAGCAGGAAGTTCACGAAACCGTCTTGATTACTGTTTCGTGAACTTCCTGCCGCAGGTTGTTGACCAGCCTCAGAGAGACCCGCCCGCGCAAACGCTGACACAAGGCACCAGCGTCATGTTTGTCTGA
- Protein Sequence
- MHQSPAFCRICLSMGAPMSNIDGTALQLVYERLAGALLVSGNRPVAACYICRAMLYKSHMLMVTATRADHALTAMLETAGEITEKSVSRIDREAIGLCASLSFSVAECCDSTPPARVAFKTEPESEDAGDTATDDEDPGEKPTSAIGRSAIGLCASLSFSVAECCDSTPPARVAVKTEPESEDAGDTATDDEDPGDGAAEGQQSVAGSSRHSYYGEPQSADTRHQCHVCLRGFQIKGHLQVHLRTHTGEKPYKCNACGKQFSRMGDLERHLRTHTGEKRYQCKFCRRRFAYSSAVKRHLRTHTGEKPYKCNDSGKQFNEKGTLESHFRTHTGEKPFECNVCEKQFSHKHHLKAHLRTHTGEKPFKCNDCGKQFNGKGHLDTHLRTHTGEKPYKCNDCGKQFNGKGHLDTHLRTHTGEKPYKCNDCGKQFNVKGNLERHLRTHPGQKLLECKICRRRFAQNSTLNTHLRTHTGEKPFKCNDCGKEFNGKGNLDTHLRTHTGEKPFECNVCRHRFAKNSALKDHFRTHTGEKPYKCNDCGKQFNVKGNLERHLRTHTGQKLLEYDTAEGQQRVAGSSRNRLDYCFVNFLPQVVDQPQRDPPAQTLTQGTSVMFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640663;
- 90% Identity
- iTF_00640663;
- 80% Identity
- iTF_00640663;