Esim011586.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- -
- Assembly
- GCA_947532085.1
- Location
- OX383950.1:15309036-15317237[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.8 1.5e+03 0.1 0.1 17 22 6 11 1 14 0.82 2 13 5.3 3e+03 -0.8 2.2 6 41 184 216 183 218 0.74 3 13 0.00039 0.22 12.4 2.7 5 41 212 244 208 246 0.80 4 13 0.68 3.8e+02 2.0 4.8 16 30 250 270 245 301 0.72 5 13 0.017 9.5 7.2 2.7 13 41 299 324 289 325 0.80 6 13 0.44 2.5e+02 2.6 0.3 21 37 332 345 331 350 0.66 7 13 0.002 1.1 10.1 5.4 5 41 345 377 341 379 0.90 8 13 0.1 58 4.6 0.3 18 41 385 405 379 407 0.79 9 13 0.001 0.56 11.1 2.7 17 41 412 433 401 436 0.81 10 13 0.13 71 4.4 1.4 18 41 441 461 434 463 0.86 11 13 0.0084 4.7 8.1 0.7 17 41 468 489 462 494 0.78 12 13 3.7 2.1e+03 -0.3 0.9 17 40 496 516 490 518 0.74 13 13 0.0023 1.3 10.0 0.8 9 30 517 542 509 547 0.75
Sequence Information
- Coding Sequence
- ATGCATCGGAGTCCAGCAGTCTGCCGCATCTGCCTCTCAGTGGACGCGCCCATGAGCAGCATTGACACCACTGCCCTGCAGCTCGTGTACGAGAGGCTGACGGGGGCTTTTCTCGTGAGTGGGAACAGGCCCGTGGAGGCGTGCTACATCTGCCGCGCTATGTTGTGCAAGAGCCACAAGCTGATGGTGACCGCCACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAACAATCAGTATCCCGGATTGACCGCGAGGCCATTGGCATGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCTGCCAAAACCAATCATGGTCAAAACTGAGCCGGAGTCAGAGGATGCTGTCGACACCGCGACGGACGATGAGGACCCAGCGGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCGATGAAGACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGATGGCGCAGCAGAGAGCCAACAGCCTGTGGCAGGAAGTTCCCGAAATAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACCagtgtcatgtttgtctgatggggtttcagtgtaagagtaaactacaaagacatttaagaactcacactggtgatacaccgtttgaatgtaatgtttgcgaaaagcagtttagtcacaaaggtaatttaaaagctcatttaagaactcacactggtgagaaaccaaataaatgtaatgattgcggcaagcaattcaatcaaaagggatttttaagaacacattcaggtgagaaacgatttatatataacaattgtattaagcaatttcatgaaaaaggtaattttacaaaacatttaagaacacacactggtgagaaaccatttgaatgtaagttttgtcgtcgtcgatttgctgacagcagtacaataaaaagacatctgagaactcacactggtgagaagccatataaatgtggcaagcaatttaatcgaaagagtagtttagaatcacattttagaacacacactggtgagaaaccatttgaatgtaatgtttgcgaaaagcagtttagtcacaaacatcatttaaaagctcatttaagaactcacactggtgagaaaccatataaatgttatgattgtggtaagcaatttaatcgaaagtgggacttagaaagacatttaagaacacacactggtgagaaaccatataactgtaatgcctgtggcaagcaatttaatgcaaaaaataatttagtaacacatttaagaacgcacactggtgagaaaccatttgaatgtaaggattgtcgtcgtcgatttgctgacaacagtaatttacgtacacatttaagaactcacactggtgagaaaccatataaatgtaatgactgtggcaagcaatttaatgcaaagagttatttagtaacacatttaagaacgcacactggtgagaaaccatttgaatgtaaggtttgtcgccgtcgatttgctcaaaatagtatattcaaaattcacttgagaactcatactgatgagaagccatataaatgcaatgactgtggcaagcaatttaatcgcaagggttatttagatgcacatttaacaactcacactggtgaaaaaccataa
- Protein Sequence
- MHRSPAVCRICLSVDAPMSSIDTTALQLVYERLTGAFLVSGNRPVEACYICRAMLCKSHKLMVTATRADHALTAMLETAGEITEQSVSRIDREAIGMCASLSFSVAECCDSTLPKPIMVKTEPESEDAVDTATDDEDPAGVPAADVDETRDSDEDAGARGGGHYADDGAAESQQPVAGSSRNSYYGEPQSADTRHQCHVCLMGFQCKSKLQRHLRTHTGDTPFECNVCEKQFSHKGNLKAHLRTHTGEKPNKCNDCGKQFNQKGFLRTHSGEKRFIYNNCIKQFHEKGNFTKHLRTHTGEKPFECKFCRRRFADSSTIKRHLRTHTGEKPYKCGKQFNRKSSLESHFRTHTGEKPFECNVCEKQFSHKHHLKAHLRTHTGEKPYKCYDCGKQFNRKWDLERHLRTHTGEKPYNCNACGKQFNAKNNLVTHLRTHTGEKPFECKDCRRRFADNSNLRTHLRTHTGEKPYKCNDCGKQFNAKSYLVTHLRTHTGEKPFECKVCRRRFAQNSIFKIHLRTHTDEKPYKCNDCGKQFNRKGYLDAHLTTHTGEKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640671;
- 90% Identity
- iTF_00640671;
- 80% Identity
- iTF_00640671;