Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:15205886-15215966[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.5 1.9e+03 -0.2 0.3 5 29 429 453 428 465 0.77

2 10 0.0029 1.6 9.6 0.7 15 41 467 490 457 492 0.80

3 10 0.016 8.8 7.3 3.3 13 41 493 518 486 519 0.83

4 10 0.0022 1.2 10.0 4.5 5 41 542 574 541 576 0.90

5 10 0.036 20 6.1 2.5 13 38 577 603 568 607 0.75

6 10 0.035 20 6.2 1.1 17 38 609 631 604 632 0.78

7 10 0.01 5.6 7.9 1.7 15 41 635 658 627 660 0.85

8 10 0.18 1e+02 3.9 1.9 17 41 665 686 661 689 0.85

9 10 0.035 20 6.1 2.4 17 41 693 714 687 729 0.81

10 10 9.5e-05 0.053 14.4 0.5 1 41 734 770 734 771 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.5	1.9e+03	-0.2	0.3	5	29	429	453	428	465	0.77
2	10	0.0029	1.6	9.6	0.7	15	41	467	490	457	492	0.80
3	10	0.016	8.8	7.3	3.3	13	41	493	518	486	519	0.83
4	10	0.0022	1.2	10.0	4.5	5	41	542	574	541	576	0.90
5	10	0.036	20	6.1	2.5	13	38	577	603	568	607	0.75
6	10	0.035	20	6.2	1.1	17	38	609	631	604	632	0.78
7	10	0.01	5.6	7.9	1.7	15	41	635	658	627	660	0.85
8	10	0.18	1e+02	3.9	1.9	17	41	665	686	661	689	0.85
9	10	0.035	20	6.1	2.4	17	41	693	714	687	729	0.81
10	10	9.5e-05	0.053	14.4	0.5	1	41	734	770	734	771	0.92

Sequence Information

Coding Sequence: ATGCATCAGAGTCCAGCATTCTGCCGTATCTGCCTCTCAATGGGCGCGCCCATGAGCAACATTGACGGCACTGCCCTGCAACTCGTGTATGAGAGACTTGCGGGGGCTCTTCTTGTGAGTGGGAACAGGCCCGTGGCGGCGTGCTACATCTGCCGCGCTATGTTGTACAAGAGCCACAAGCTGATGGTGACCGCCACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAAAAATCAGTATCCCGGATTGACCGCGAGGCCATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGTTCAAAACCGAGCCGGAGTCAGAGGATGCTGGCGACACCGCGACGGACGATGAGGATCCAACGGTTCCATCTCGACCGCATTTGCCGGGGACACGGGAAGGGAAATACGACCGCGAACCCCGGCGCGGTTGGCCGCCAACGCGGCCCCTCCTCGGGGACGTCCGAGCGCCCTCCATCCACTCACCAAGTAGGCGCGTCCGGAACTCACGGACGCGCCGTACCTCCTTGGGCCAATTGAGAGGCGGCAGACTCCCACGCAGTCCACCGCCTGTGGCCCCATGGGAGCCAGATAAACTGGCTCCCATGGGGCCAGATAAACTGGCTCCCAGCGGCGGAGAAGATGAAAGGCTCCGCCGCTTGCCTCTCGCCGCAAACACGTTGCGGCACCGCTCGGCCGCGGAAGAAAGGGAGATCGGCAACGCAGCACCGAAACTCCCTCTCCTCCGCGACCGATCTCCGACCACAACCACGGCGGTGTGGCCCCGCCTGAAGCGCCGGGAGAGCAATAAAATATTACCCTCCCGGCGGCTCCACCTCGGGTGGGGGGAGATCTTCCCACTTCCCCGCCGCCCCAATGGGCGCATCCTTGCGGAAGCGCCCCTCCCCGGGTGGGGGGAGAACTTCCCACTCCCCCGCCGCCCCAATGTCGGCGCTCGCTGCTGGTGTGTCAGGCAGCAGGAGCGCCCCCGCGCGGGTTCCTCTTCGCTTCCCCGTGAAAAGCCGACATCCGCGATTGGCCGCTCGGCCATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAACCGAGCCGGAGTCAGAGGATGCTGGCGACACCGCGACGGACGATGAGGATCCAGGGGATGGCGCAGCAGAGGGCCAACAGTCTGTGGCGGGCAGTTCCCGACACAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACCagtgtcatgtttgtctgagggggtttcagatcaagggtcatctacaagtacacttaagaactcacactggtgagaagccatataaatgtaatgcctgtggcaagcaatttagtcgaatgggtgatttagaaagacatttaagaactcacactggtgagaaacgatatcagtgtaagttttgtcgtcgtcgatttgcttacagcagtgcagtaaaaagacatctgagaactcacactggtgagaaaccatataaatgtaatgatagtggcaagcaatttaatgaaaaaggtactttggaatcacatttcagaactcacactggtgaaaaaccatttgagtgtaatgtttgcgaaaagcagtttagtcacaaacatcatttaaaagctcatttaagaactcatactggtgagaagccatttaaatgtaatgattgtggcaagcaatttaatggaaagggtcatttagatacacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaagcaatttaatggaaagggtcatttagatacacatttaagaactcacactggcgagaagccatacaaatgtaatgattgtggcaagcaatttaatgtaaagggtaatttagaaagacatttaagaactcaccctggtcaaaaactattagaatgtaagatttgtcgtcgtcgatttgctcaaaacagtacattaaacacacacttgagaactcatactggtgagaagccatttaaatgtaatgattgtggcaaggaatttaatggaaagggtaatttagatacacatttaagaactcacactggtgagaaaccatttgaatgtaatgtttgtcgtcatcgatttgctaaaaacagtgcattaaaagatcacttcagaactcatactggtgagaagccatataaatgtaatgattgcggcaagcaatttaatgtaaagggtaatttagaaagacatttaagaactcatactggtcagaaactattagaatATGACACAGCAGAGGGCCAACAGCGTGTAGCAGGAAGTTCACGAAACCGTCTTGATTACTGTATCGTGAACTTCCTGCCGCAGGTTGTTGACCAGCCTCAGAGAGACCCGCCCGCGCAAACGCTGACACAAGGCACCAGCGTCATGTTTGTCTGA
Protein Sequence: MHQSPAFCRICLSMGAPMSNIDGTALQLVYERLAGALLVSGNRPVAACYICRAMLYKSHKLMVTATRADHALTAMLETAGEITEKSVSRIDREAIGLCASLSFSVAECCDSTPPARVAFKTEPESEDAGDTATDDEDPTVPSRPHLPGTREGKYDREPRRGWPPTRPLLGDVRAPSIHSPSRRVRNSRTRRTSLGQLRGGRLPRSPPPVAPWEPDKLAPMGPDKLAPSGGEDERLRRLPLAANTLRHRSAAEEREIGNAAPKLPLLRDRSPTTTTAVWPRLKRRESNKILPSRRLHLGWGEIFPLPRRPNGRILAEAPLPGWGENFPLPRRPNVGARCWCVRQQERPRAGSSSLPREKPTSAIGRSAIGLCASLSFSVAECCDSTPPARVAVKTEPESEDAGDTATDDEDPGDGAAEGQQSVAGSSRHSYYGEPQSADTRHQCHVCLRGFQIKGHLQVHLRTHTGEKPYKCNACGKQFSRMGDLERHLRTHTGEKRYQCKFCRRRFAYSSAVKRHLRTHTGEKPYKCNDSGKQFNEKGTLESHFRTHTGEKPFECNVCEKQFSHKHHLKAHLRTHTGEKPFKCNDCGKQFNGKGHLDTHLRTHTGEKPYKCNDCGKQFNGKGHLDTHLRTHTGEKPYKCNDCGKQFNVKGNLERHLRTHPGQKLLECKICRRRFAQNSTLNTHLRTHTGEKPFKCNDCGKEFNGKGNLDTHLRTHTGEKPFECNVCRHRFAKNSALKDHFRTHTGEKPYKCNDCGKQFNVKGNLERHLRTHTGQKLLEYDTAEGQQRVAGSSRNRLDYCIVNFLPQVVDQPQRDPPAQTLTQGTSVMFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640673;
90% Identity: iTF_00640665;
80% Identity: iTF_00640665;