Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:15571001-15577280[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.4 3e+03 -0.8 0.2 17 22 6 11 2 12 0.87

2 14 1.5 8.2e+02 1.0 0.3 14 30 43 59 36 64 0.82

3 14 2 1.1e+03 0.6 0.2 5 27 212 234 212 247 0.81

4 14 0.078 43 5.0 0.8 15 40 250 272 241 275 0.75

5 14 8.3e-05 0.047 14.6 1.2 18 41 281 301 272 303 0.88

6 14 0.00027 0.15 12.9 0.7 17 41 308 329 302 331 0.87

7 14 0.28 1.6e+02 3.2 1.3 17 40 336 356 329 359 0.74

8 14 0.28 1.6e+02 3.3 9.2 14 38 361 386 350 400 0.74

9 14 0.35 2e+02 2.9 3.4 14 40 389 412 386 415 0.86

10 14 0.23 1.3e+02 3.6 1.2 17 40 420 440 412 443 0.73

11 14 0.0025 1.4 9.8 2.4 14 41 445 469 437 472 0.84

12 14 0.037 20 6.1 2.2 14 41 473 497 470 499 0.86

13 14 0.5 2.8e+02 2.5 1.5 14 37 501 525 497 527 0.75

14 14 0.0019 1.1 10.2 2.1 14 41 529 553 521 555 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.4	3e+03	-0.8	0.2	17	22	6	11	2	12	0.87
2	14	1.5	8.2e+02	1.0	0.3	14	30	43	59	36	64	0.82
3	14	2	1.1e+03	0.6	0.2	5	27	212	234	212	247	0.81
4	14	0.078	43	5.0	0.8	15	40	250	272	241	275	0.75
5	14	8.3e-05	0.047	14.6	1.2	18	41	281	301	272	303	0.88
6	14	0.00027	0.15	12.9	0.7	17	41	308	329	302	331	0.87
7	14	0.28	1.6e+02	3.2	1.3	17	40	336	356	329	359	0.74
8	14	0.28	1.6e+02	3.3	9.2	14	38	361	386	350	400	0.74
9	14	0.35	2e+02	2.9	3.4	14	40	389	412	386	415	0.86
10	14	0.23	1.3e+02	3.6	1.2	17	40	420	440	412	443	0.73
11	14	0.0025	1.4	9.8	2.4	14	41	445	469	437	472	0.84
12	14	0.037	20	6.1	2.2	14	41	473	497	470	499	0.86
13	14	0.5	2.8e+02	2.5	1.5	14	37	501	525	497	527	0.75
14	14	0.0019	1.1	10.2	2.1	14	41	529	553	521	555	0.83

Sequence Information

Coding Sequence: ATGCATCAGAGTCCAGTAGTTTGCCGCATCTGCCTCTCAATGGACGCGCTCGTGACCAACATTGACGATACTGCCCTGCAACTCGTGTACGAGAGGTTGACGGGTGCCCTTCTCGTGGCTAGGAACAGGCCCGTGGCAGCATGCTACATTTGCTGTGCTAAGCTGAAGAAGAGCCACAAACTGATGGTGACTGCCATCAGGGCAGACAACGTGCTGACTGCTATTTTGGAGAAGGCTGACGAGATTACAGAAAAATCCATATCCCTGATTGACCGCGAGGCGATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTGATGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAGCTGAGCCGGAGTCAGAGGATGCTGGTGAAACTGCAATGGATGATGAGGATCCGGAGGAAAAGCCGACATCCGCGATTGGCCGCTCGGCCATTGGCTCGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAACCGAGCCGGAGTCAGAGGATGCTGGCGACACCGCGACGGACGATGAGGATCCAGGGGATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGAACCAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACCagtgtcatgtttgtctgagggagtttcagtggaagggtcagctacaagtacacttaagaactcacactggtgagaagccatataaatgtaatgactgtggcaagcaatttaatctaaagggtaatttagaaatacatttaagaactcacactggtgaaaaaccatttgcatgtaatgtttgcgaaaagcagtttagtcgcaaaggtaatttacgtacacatttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaagcaatttaatgcaaagagtaatttagtaacacatttaagaactcacactggtgagaagccatataaatgtaatgactgtggcaagcaatttgttctaaagggtcatttagacagacacttaagaactcacactggtgagaaaccatataaatgtaatgattgtggcaagcaatttaatcaaaagagtgctttaacaaatcatttaagaacacacactcgtgaaaaaccatttgaatgtaaggtttgtcgtcatcgatttgctcacagcagtacattaaaaacacacttgagaattcacactggtgagaagccatataaatgtaatgactgtggcaagcaatttgttctaaagggtcatttagacagacacttaagaactcacactggtgagaaaccatataaatgtaatgattgtggcaagcaatttaatcaaaagagtgctttaaaaagtcatttaagaacacacactcgtgaaaaaccatttgaatgtaaggtttgtcgtcatcgatttgctcagagcagtacattaaaaacacacctgagaactcacactggtgagaagtcatataaatgttatgactgtggcaagcaatttgttcaaaagggtcatttagacaaacacttaagaactcacactggtgagaaaccatataaatgtaatgattgtggcaagcaatttaatcaaaagagtgctttaaaaagtcatttaagaacacacactcgtgaaaaaccataa
Protein Sequence: MHQSPVVCRICLSMDALVTNIDDTALQLVYERLTGALLVARNRPVAACYICCAKLKKSHKLMVTAIRADNVLTAILEKADEITEKSISLIDREAIGLCASLSFSVAECDDSTPPARVAVKAEPESEDAGETAMDDEDPEEKPTSAIGRSAIGSCASLSFSVAECCDSTPPARVAVKTEPESEDAGDTATDDEDPGDGAAEGQQPVAGSSRTSYYGEPQSADTRHQCHVCLREFQWKGQLQVHLRTHTGEKPYKCNDCGKQFNLKGNLEIHLRTHTGEKPFACNVCEKQFSRKGNLRTHLRTHTGEKPYKCNDCGKQFNAKSNLVTHLRTHTGEKPYKCNDCGKQFVLKGHLDRHLRTHTGEKPYKCNDCGKQFNQKSALTNHLRTHTREKPFECKVCRHRFAHSSTLKTHLRIHTGEKPYKCNDCGKQFVLKGHLDRHLRTHTGEKPYKCNDCGKQFNQKSALKSHLRTHTREKPFECKVCRHRFAQSSTLKTHLRTHTGEKSYKCYDCGKQFVQKGHLDKHLRTHTGEKPYKCNDCGKQFNQKSALKSHLRTHTREKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640657;
90% Identity: iTF_00640657;
80% Identity: iTF_00640657;