Esim011483.2
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- ZNF202
- Assembly
- GCA_947532085.1
- Location
- OX383950.1:13886095-13898492[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2.6 1.5e+03 0.2 0.1 17 22 6 11 1 14 0.82 2 12 6.6 3.7e+03 -1.1 0.1 16 26 45 55 39 62 0.80 3 12 0.021 12 6.8 0.9 5 41 183 216 183 218 0.92 4 12 0.0016 0.89 10.5 2.6 14 41 220 244 212 246 0.77 5 12 0.0042 2.4 9.1 5.5 14 41 248 272 240 274 0.84 6 12 0.003 1.7 9.6 0.3 17 41 279 300 273 302 0.89 7 12 0.06 34 5.4 3.0 17 41 307 328 301 330 0.83 8 12 0.33 1.8e+02 3.1 2.2 17 29 335 347 329 358 0.78 9 12 0.039 22 6.0 0.9 15 38 361 381 349 387 0.73 10 12 0.031 17 6.3 3.5 14 41 388 412 380 414 0.79 11 12 0.22 1.3e+02 3.6 3.0 17 37 419 436 413 441 0.71 12 12 5.1e-05 0.029 15.2 4.8 5 41 436 468 433 469 0.93
Sequence Information
- Coding Sequence
- ATGCATCGGAGTCCAGCAGTCTGCCGCATCTGCCTCTCAGTGGACGCGCCCATGAGCAACATTGACACCACTGCCCTGCAGCTCGTGTACGAGAGGCTGACGGGGGCTTTTCTCGTGAGTGGGAACAGGCCCGTGGCGGCGTGCTACATCTGCCGCGCTATGTTGTACAAGAGCCACAAGCTGATGGTGACCGCCACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAACAATCAGTATCCCGGATTGACCGCGAGGCCATTGGCATGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCTGCCAAAACCGATCATGGTCAAAACTGAGCCGGAGTCAGAGGATGCTGTCGACACCGCGACGGACGATGAGGACCCAGCGGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCAATGAAGACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAAATCCCGAAACAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACCagtgtaatgtttgtctgagggagtttcagtgtaagagtgacctacagagacacttaagaactcacactggtgagaagccatataaatgtaatgcctgtggcaagcaatttagtcgaaagggtgatttagaaagacatttaagaactcacactggtgagaaaccatttgtatgtaatgtttgcgaaaagcagtttaatcgcaaaggttgtttaaaaattcatttaagaactcacactggtgagaagccatatgaatgtaatgattgtggcaaggaatttaatgtaaagagtaatttagaaacacatttaagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctcacagcagtacattaacaaaacatctgagaactcacactggtgagaagccatataaatgtaatggttgtggtaagaaatttaatcaaaagggtcatttagatattcatttaagaactcacactggtgagaagccatataaatgtaatgattgtggcaagcaatttaatcaaaagggtgatttagaatcacatttaagaacacatactggtgagaaaccatttgaatgtaaggtttgtcgacgtcgatttactgaaagcagtacattaacaaaacatctgagaactcacactggtgagaagccgtataaatgtaatgattgtggcaagcaatttaatcacaagggtaatttagaatcacattttagaacacatacttgtgagaaaccatttgaatgtaatgtttgcgaaaagcagtttagtcacaaaagtagtttaaaaactcatttaagaactcacactggtgaaaaaccatttgaatATGACACAGCAGAGGGCCAACAGCGTGTAGCAGGAAGTTCACGAAACCGTCTTGATTACTGTTTCGTGAACTTCCTGCCGCAGGGTGTTGACCAGCCTCAGAGAGACCCGCGCGCGCAAACGCTGACACAAGGCACCAGCGTCATGTTTGTCTGA
- Protein Sequence
- MHRSPAVCRICLSVDAPMSNIDTTALQLVYERLTGAFLVSGNRPVAACYICRAMLYKSHKLMVTATRADHALTAMLETAGEITEQSVSRIDREAIGMCASLSFSVAECCDSTLPKPIMVKTEPESEDAVDTATDDEDPAGVPAADVDETRDSNEDAGARGGGHYADDGAAEGQQPVAGKSRNSYYGEPQSADTRHQCNVCLREFQCKSDLQRHLRTHTGEKPYKCNACGKQFSRKGDLERHLRTHTGEKPFVCNVCEKQFNRKGCLKIHLRTHTGEKPYECNDCGKEFNVKSNLETHLRTHTGEKPFECKVCRRRFAHSSTLTKHLRTHTGEKPYKCNGCGKKFNQKGHLDIHLRTHTGEKPYKCNDCGKQFNQKGDLESHLRTHTGEKPFECKVCRRRFTESSTLTKHLRTHTGEKPYKCNDCGKQFNHKGNLESHFRTHTCEKPFECNVCEKQFSHKSSLKTHLRTHTGEKPFEYDTAEGQQRVAGSSRNRLDYCFVNFLPQGVDQPQRDPRAQTLTQGTSVMFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640688;
- 90% Identity
- iTF_00640667;
- 80% Identity
- iTF_00640667;