Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:14174295-14180378[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.9 2.2e+03 -0.4 0.8 16 30 45 59 42 64 0.85

2 13 0.02 11 6.9 1.1 14 41 276 300 263 302 0.82

3 13 0.08 45 5.0 1.9 15 41 305 328 297 330 0.84

4 13 0.012 6.6 7.7 4.6 17 37 335 356 329 358 0.74

5 13 4.7e-05 0.026 15.4 2.0 19 41 365 384 357 386 0.92

6 13 0.087 49 4.9 1.1 17 41 391 412 385 414 0.86

7 13 0.047 26 5.8 0.8 17 41 419 440 413 442 0.87

8 13 0.0058 3.3 8.6 2.1 17 41 447 468 440 470 0.84

9 13 0.028 16 6.5 0.9 17 41 475 496 468 499 0.77

10 13 0.18 1e+02 3.9 2.2 17 35 503 518 497 525 0.76

11 13 0.002 1.1 10.2 1.1 3 41 518 552 516 554 0.83

12 13 0.33 1.8e+02 3.1 2.4 17 34 559 573 553 581 0.76

13 13 0.0026 1.5 9.8 2.9 3 41 574 608 572 609 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.9	2.2e+03	-0.4	0.8	16	30	45	59	42	64	0.85
2	13	0.02	11	6.9	1.1	14	41	276	300	263	302	0.82
3	13	0.08	45	5.0	1.9	15	41	305	328	297	330	0.84
4	13	0.012	6.6	7.7	4.6	17	37	335	356	329	358	0.74
5	13	4.7e-05	0.026	15.4	2.0	19	41	365	384	357	386	0.92
6	13	0.087	49	4.9	1.1	17	41	391	412	385	414	0.86
7	13	0.047	26	5.8	0.8	17	41	419	440	413	442	0.87
8	13	0.0058	3.3	8.6	2.1	17	41	447	468	440	470	0.84
9	13	0.028	16	6.5	0.9	17	41	475	496	468	499	0.77
10	13	0.18	1e+02	3.9	2.2	17	35	503	518	497	525	0.76
11	13	0.002	1.1	10.2	1.1	3	41	518	552	516	554	0.83
12	13	0.33	1.8e+02	3.1	2.4	17	34	559	573	553	581	0.76
13	13	0.0026	1.5	9.8	2.9	3	41	574	608	572	609	0.79

Sequence Information

Coding Sequence: ATGCATCAGAGTCCAGTATTTTGCCGCATCTGCCTCTCAATGGACGCGCTCGTGACCAACATTGACGGTACTGCCCTGCAACTCGTGTACGAGAGGTTGACGGGTGCCCTTCTCGTGGCTGGGAACAGGCCCGTGGCAGCATGCTACATTTGCTGTGCTAATCTGAAGAAGAGCCACAAGCTGATGGTGACTGCCATCAGGGCAGACAACGTGCTGACTGCTATTTTGGAGAAGGCTGAAGAAATTACAGAAAAATCCATATCCCTGATTGACCGCGAGGCCATTGGCTTGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTGATGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAGCTGAGCCGGAGTCAGAGGATGCTGGCGAAACTGCAATGGATGATGAGGATCCGGAGGAAAAGCCGACATCCGCGATTGGCCGCTCGGCCATTGGCTCGTGTGCGTCGCTGTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCCGCCCGCCAGGGTCGCGGTCAAAACCGAGCCGGAGTCAGAGGATGCTGGCGACACCGCGACGGACGATGAGGATCCAGGCGGAGTTCCCCCGGCTGACGTGGACGAGACACGGGACTCCGATGAAGACGCGGGGGCGCGGGGCGGGGGACACTACGCGGACGATGGCGCAACAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGAAACAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACCAGAGTCATGTTTGTCTGAGGGGGtttcagaagaagagacatctacaaatatgcttgagaacgcacactggtgagaagctgtataattgtaacagctgtgggaagcaatttttacgaaagagtgatttagacagccatttaagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctgacagcagttcattaaaaactcatctgagaactcacactggtgagaaaccatttgagtgtaatgtttgcgaaaagcagtttagttacaaatgtcatttaaaaactcatttaagaactcacactggtgagaaaccatttgggtgtaatgtttgcaaaaagcagtttagttacaaaagtaatttaaaaactcatttaagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctgacagcagttcattaaaaacacatatgagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctgacagcagttcattaaaaacacatttgagaactcacactggtgagaaaccatttgagtgttatgtctgcgaaaagcagtttagttacaaaaatcatttaaaaactcatttaagaactcacactggtgagaaaccatttgaatgtatggtttgccgtcgtcgatttgctgacagcagttcattaacaaaacatctgagaactcacactggtgagaagccgtataaatgtaatgattgtggcaagcaatttaatcaaaagggtaatttaaaattacatttcagaactcatactggtgagaaaccatttgaatgtaaggtttgtcgacgtcgatttgctgacagcagtacattaacaacacatctgagaactcacactggtgagaagccgtataaatgcaatgattgtggcaagcaatttaatcaaaagagtcatttaaaattacatttcagaacacacactggtgagaagccatatcagtgtaagttttgtcgtcgccgatttgctaacagcagtgtattaacaaaacatttaagaacacacactggttaa
Protein Sequence: MHQSPVFCRICLSMDALVTNIDGTALQLVYERLTGALLVAGNRPVAACYICCANLKKSHKLMVTAIRADNVLTAILEKAEEITEKSISLIDREAIGLCASLSFSVAECDDSTPPARVAVKAEPESEDAGETAMDDEDPEEKPTSAIGRSAIGSCASLSFSVAECCDSTPPARVAVKTEPESEDAGDTATDDEDPGGVPPADVDETRDSDEDAGARGGGHYADDGATEGQQPVAGSSRNSYYGEPQSADTRHQSHVCLRGFQKKRHLQICLRTHTGEKLYNCNSCGKQFLRKSDLDSHLRTHTGEKPFECKVCRRRFADSSSLKTHLRTHTGEKPFECNVCEKQFSYKCHLKTHLRTHTGEKPFGCNVCKKQFSYKSNLKTHLRTHTGEKPFECKVCRRRFADSSSLKTHMRTHTGEKPFECKVCRRRFADSSSLKTHLRTHTGEKPFECYVCEKQFSYKNHLKTHLRTHTGEKPFECMVCRRRFADSSSLTKHLRTHTGEKPYKCNDCGKQFNQKGNLKLHFRTHTGEKPFECKVCRRRFADSSTLTTHLRTHTGEKPYKCNDCGKQFNQKSHLKLHFRTHTGEKPYQCKFCRRRFANSSVLTKHLRTHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640662;
90% Identity: iTF_00640662;
80% Identity: iTF_00640662;