Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383950.1:13001878-13017836[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 7.2 4e+03 -1.2 0.1 17 22 6 11 2 13 0.86

2 23 0.26 1.5e+02 3.4 1.7 5 41 397 430 396 432 0.92

3 23 0.0022 1.2 10.0 0.4 18 41 438 458 433 460 0.90

4 23 0.00037 0.21 12.5 0.6 17 41 465 486 460 488 0.88

5 23 0.05 28 5.7 1.0 17 41 493 514 487 516 0.80

6 23 0.0018 1 10.3 2.9 14 41 518 542 510 544 0.84

7 23 0.00051 0.29 12.0 2.9 3 41 536 570 535 572 0.85

8 23 0.31 1.7e+02 3.1 1.7 17 38 577 595 571 599 0.70

9 23 0.77 4.3e+02 1.9 7.5 14 41 602 626 594 628 0.72

10 23 0.0084 4.7 8.1 2.0 14 41 630 654 622 657 0.76

11 23 0.042 24 5.9 1.9 17 41 661 682 653 684 0.83

12 23 0.18 1e+02 3.9 3.8 17 40 689 709 683 712 0.72

13 23 0.0031 1.7 9.5 2.1 15 41 715 738 704 740 0.76

14 23 0.14 78 4.2 1.9 16 41 744 766 735 768 0.84

15 23 8.9e-05 0.05 14.5 1.7 14 41 770 794 766 796 0.87

16 23 0.041 23 5.9 1.2 17 41 801 822 793 824 0.83

17 23 0.11 63 4.5 0.8 17 32 829 843 823 852 0.76

18 23 0.26 1.5e+02 3.4 6.5 15 37 855 878 846 880 0.72

19 23 0.069 39 5.2 2.6 17 41 885 906 878 908 0.79

20 23 0.004 2.3 9.2 3.0 8 41 905 934 900 936 0.80

21 23 0.0042 2.4 9.1 1.5 17 41 941 962 935 964 0.78

22 23 0.011 6.2 7.8 1.5 12 41 964 990 959 992 0.81

23 23 0.012 6.6 7.7 1.3 17 41 997 1018 991 1019 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	7.2	4e+03	-1.2	0.1	17	22	6	11	2	13	0.86
2	23	0.26	1.5e+02	3.4	1.7	5	41	397	430	396	432	0.92
3	23	0.0022	1.2	10.0	0.4	18	41	438	458	433	460	0.90
4	23	0.00037	0.21	12.5	0.6	17	41	465	486	460	488	0.88
5	23	0.05	28	5.7	1.0	17	41	493	514	487	516	0.80
6	23	0.0018	1	10.3	2.9	14	41	518	542	510	544	0.84
7	23	0.00051	0.29	12.0	2.9	3	41	536	570	535	572	0.85
8	23	0.31	1.7e+02	3.1	1.7	17	38	577	595	571	599	0.70
9	23	0.77	4.3e+02	1.9	7.5	14	41	602	626	594	628	0.72
10	23	0.0084	4.7	8.1	2.0	14	41	630	654	622	657	0.76
11	23	0.042	24	5.9	1.9	17	41	661	682	653	684	0.83
12	23	0.18	1e+02	3.9	3.8	17	40	689	709	683	712	0.72
13	23	0.0031	1.7	9.5	2.1	15	41	715	738	704	740	0.76
14	23	0.14	78	4.2	1.9	16	41	744	766	735	768	0.84
15	23	8.9e-05	0.05	14.5	1.7	14	41	770	794	766	796	0.87
16	23	0.041	23	5.9	1.2	17	41	801	822	793	824	0.83
17	23	0.11	63	4.5	0.8	17	32	829	843	823	852	0.76
18	23	0.26	1.5e+02	3.4	6.5	15	37	855	878	846	880	0.72
19	23	0.069	39	5.2	2.6	17	41	885	906	878	908	0.79
20	23	0.004	2.3	9.2	3.0	8	41	905	934	900	936	0.80
21	23	0.0042	2.4	9.1	1.5	17	41	941	962	935	964	0.78
22	23	0.011	6.2	7.8	1.5	12	41	964	990	959	992	0.81
23	23	0.012	6.6	7.7	1.3	17	41	997	1018	991	1019	0.77

Sequence Information

Coding Sequence: ATGCATCGGAGTCCAGCAGTCTGCCGCATCTGCCTTTCAGTGGACGCGCCCATGAGCAACATTGACACCACTGCCTTGCAGCTTGTGTACGAGAGGCTGACGGGGGCTTTTCTCGTGAGTGGGAACAGGCCCGTGGCGGCGTGCTACATCTGCCGCGCTATGTTGTACAAGAGCCACAAGCTGATGGTGACCGCCACCAGGGCAGACCATGCGCTGACTGCTATGTTGGAGACGGCTGGCGAGATTACAGAAAAATCAGTATCCCGGATTGACCGCTCGGCCATTGGCTTGTGTGCGTCGCTTTCCTTCTCTGTGGCTGAATGTTGTGACAGCACGCTGCCAAAACCGGTCATGGTCAAAACTGAGCCGGAGTCAGAGGATGCTGACGACACCGCGACGGACGATGAGGACCCAGCGGatgactctgatatcgaggaggaAGTCAAAGAAACGGGTAGGGCGAGAAGCTACGATAAATTAGTGAGTCAGATCAGCTGTGAAACTAGGAAAATAGTCAAGAGTGAATTGGAGGGCTTGACGTCGGCTGTTGAATATCTAAACAGTCAAGTAGCAGACCTAGAAGGCATCGCAAAACAGCAGGAGAGCACAATCAAAATGCTGGTAAATAAAAATGCTGAATTACTGAAGAAAAACCAAAATCTAGAACTCCGAATCAGTGCCATAGAGCAAAGAGTGCTAGAAGTTGACCAAAAACTTCTGTGTAACAATGTGGAGAGTGCTGGAGTGCCAGAGCTGCCTAACCAGGACGCGGTCAGTGTAGTTAAAAAGGTAGCTGAAAAACTGAAGATGTGCAGCCAGCAGGTCATAGGAGACCGGCGTGTTACATCAAGGCGCAAGGGGCAGTCAGATCATATCGTTGTGGAGCTGCAGTCCAAGGGAATATGCGAGCAGTGGATATCAGCAGCAAAAACTCAAGAAATACAGGCCGGCAGCATTTGGACCGAGCTACCCGCGGAAAAGGCGTCAAGTCGAGTGTATGTTAGGGCGGCTCTCACGCCACATACCAAGGCATTGTTGTATAGGGCTAGAAACATCTTAGGCGTTCCCGCGGCTGACGTGGACGAGACACGGGACTCCGATGAAGACGCGGGGGCGCGGGGCGGGGTACACTACGCGGACGATGGCGCAGCAGAGGGCCAACAGCCTGTGGCAGGAAGTTCCCGAAACAGTTATTATGGCGAGCCTCAGAGCGCTGACACAAGGCACCagtgtcatgtttgtctgaggcagtttcagtggaagagtcatctacaaagacacttaagaactcacactggtgacaaaccatttgcatgtaatgtttgcgaaaagcggtttagtggcaaaggtaatttaaaagctcatttaagaactcacacgggtgaaaaaccatttgagtgtaatgtttgcgaaaagcagtttagttacaaaagttatttaaaaactcatttaagaactcacactggtgagaagccatataaatgtaataactgtggcaagcaatttaatgaaaagggtgatttagaaagacatttaagaacacacactggtgaaaaaccatttgaatgtaatgtttgcgaaaagcagtttagtcacaaaggtaatttaaaagctcatttaagaactcacactaatgataaaccatttgaatgtaatgtttgcgaaaagcagtttagtcacaaaggtaatttaaaagctcatttaagaactcacactggtgagaagccatataaatgtaataactgtcgcaagcaatttaatgaaaagggtgatttagaaagtcatttaagaacacacactggtgaaaaaccatttgaatgtaaggtttgcgaaaagcagtttagtcacaaatgtcatttaaaatcacatttaagaactcacactggtgagaagccatatgaatgtaatgattgtggcaagaaatttagtcgaaaggatactttagaaacacatttaagaacacacactggtgagaaaccatttgaatgtaaggtttgtcgacgtcgatttactgacagcagtacattaacaaaacatctgagaactcacactggtgagaagccatataaatgtaatgtttgcgaaaagcagtttagtcacaaatgtcttttaaaagttcatttaagaactcacactggtgagaagccatatgaatgtaatagttgtggtaagaaatttagtcgaaaggatactttagaaacacatttaagaacacacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctgacagcagttcattaaaaacacatctgagaactcatactggtgagaaaccaattgagtgtaatgtttgcgaaaagcagtttagttacaaaagtcatttaaaaactcatttaagaactcacactggtgagaaaccatttgaatgtaaggtttgtcgtcgtcgatttgctgacagcagtacattaacaaaacatctgagaactcacactggtgagaagccatataaatgtaatgattgtggcaagcaatttaatcaaaagggtactttagaattacatttaagaacacatactggtgagaaaccatttgaatgtaatgtttgcgaaaagcagtttagtcacaaatgtcatttaaaaactcatttaagaactcacactggtgagaagccatataaatgtaatgactgtggcaagcaatttaataaaaaggatcatttaaaatcacatttaagaacacacaccggtgagaaaccatttgaatgtaatgtttgcaaaaagcagtttagtggcaatagttatttaaaaactcatttaagaactcacactggtgagaagccatataaatgtaatggttgtggtaagaaatttagtcgaaaggatactttagaaacacatttaagaacacacactgatgagaaaccatttgaatgtaaggtttgtcgacgtcgatttgctgacagcagtacattaacaaaacatctgagaactcacactggtgagaaaccatatcagtgtaagttttgtcgtcgtcgatttgcttacagcagtgtattaacaaagcatttaagaacacacactggTTAA
Protein Sequence: MHRSPAVCRICLSVDAPMSNIDTTALQLVYERLTGAFLVSGNRPVAACYICRAMLYKSHKLMVTATRADHALTAMLETAGEITEKSVSRIDRSAIGLCASLSFSVAECCDSTLPKPVMVKTEPESEDADDTATDDEDPADDSDIEEEVKETGRARSYDKLVSQISCETRKIVKSELEGLTSAVEYLNSQVADLEGIAKQQESTIKMLVNKNAELLKKNQNLELRISAIEQRVLEVDQKLLCNNVESAGVPELPNQDAVSVVKKVAEKLKMCSQQVIGDRRVTSRRKGQSDHIVVELQSKGICEQWISAAKTQEIQAGSIWTELPAEKASSRVYVRAALTPHTKALLYRARNILGVPAADVDETRDSDEDAGARGGVHYADDGAAEGQQPVAGSSRNSYYGEPQSADTRHQCHVCLRQFQWKSHLQRHLRTHTGDKPFACNVCEKRFSGKGNLKAHLRTHTGEKPFECNVCEKQFSYKSYLKTHLRTHTGEKPYKCNNCGKQFNEKGDLERHLRTHTGEKPFECNVCEKQFSHKGNLKAHLRTHTNDKPFECNVCEKQFSHKGNLKAHLRTHTGEKPYKCNNCRKQFNEKGDLESHLRTHTGEKPFECKVCEKQFSHKCHLKSHLRTHTGEKPYECNDCGKKFSRKDTLETHLRTHTGEKPFECKVCRRRFTDSSTLTKHLRTHTGEKPYKCNVCEKQFSHKCLLKVHLRTHTGEKPYECNSCGKKFSRKDTLETHLRTHTGEKPFECKVCRRRFADSSSLKTHLRTHTGEKPIECNVCEKQFSYKSHLKTHLRTHTGEKPFECKVCRRRFADSSTLTKHLRTHTGEKPYKCNDCGKQFNQKGTLELHLRTHTGEKPFECNVCEKQFSHKCHLKTHLRTHTGEKPYKCNDCGKQFNKKDHLKSHLRTHTGEKPFECNVCKKQFSGNSYLKTHLRTHTGEKPYKCNGCGKKFSRKDTLETHLRTHTDEKPFECKVCRRRFADSSTLTKHLRTHTGEKPYQCKFCRRRFAYSSVLTKHLRTHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640647;
90% Identity: iTF_00640647;
80% Identity: iTF_00640647;