Esim013132.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- clz9
- Assembly
- GCA_947532085.1
- Location
- OX383928.1:14597364-14599883[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 7.4e-05 23.2 0.0 2 36 9 43 8 50 0.83
Sequence Information
- Coding Sequence
- ATGGCACTCAGAAAAGATTATGCCCCGGAACAGATGGAAAAGGCTATAGAGGCCGTAAGAAGAGGAGAAAAGGTTGCTGTTGCAGCTAAAACATTTGGAGTTCCACGAATAACTCTTTATGATAAGGTGACCGGTAAGACACCAGTTGGTTGCGCTATGGGGCCGAGTACTGTTTTAACAAAAACAGAAGAGGATGTATTGTCCTTTCTCAAAAGACATCCCATACTGGCACAAAAAGTACCAGATAACTTGACCAGAGCACGTGACACCGTGACTGAGAATGATATTTTAAACTGGTTTCAAGAAATCAACGTATATCTGGAGGACAAAAATCTAAAAGCTGTTCTAGCCGACCCAAATAGAGTGTTTAACACTGATGAAAGTGCGTTTTTTTTATCCCCAAAACCTGGTCGTGTGCTAGCTAAGAGAGGAGAAAAACATCTTTACAGCGCTTGTGGCGACGATAAAGAGAATCTAACTGTCCTGATCACAGCAAATGCTTCCGGAGTACTTGCTCCTCCAATGATTATTTATAATTATGAACGGATTCCTGCATATATATCTGCCGGCATTCCTGATGAATGGGGGGTAGGGAAATCAGACACCGGATGGATGTGCAGTAACACCTTCTACGAATACGTTACAAACGTTTTCAATCCCTGGTTGGAGCAAAACAGTATAGAAAAACCAGTTTTATTCTTTTTAGACGGCCACAAATCCCATCTTACTTTGCATCTATCAAATTTTTGTTCTGGGAATGGAATTGAGGTCATAGCTTTATATCCCAACTCCACCCATATTCTGCAGCCTATGGACTTGTCTGTCTTCCGGCCGCTTAAAGTATATTGGAAGAAAGCAGTCAATGAATGGAAAATGGAGAATCTCGGACAAAATCTCCGCAAAGAAAATTTTGCGTCAGTACTCCAAACGGCTCTCAAAAATATTTCAAAAGATCCCATCAAAAATGGGTTCCGGGCTGGTGGCCTTTTTCCCTTCGGACCCGATTATATTGACTTTTCAAAAATTAAACATACGCAAGTCTCATCTAAGGAGAAAGTTATTGATCCAGCACAAAGTGAATTCGTCAAATATTTAGACAAAGAAATTGTAAAAATTTTTTCAACACAGAAATTACAACAGTTCAATGACTTTTTCTACAAGGACAGAAATGCCCTGGAAAACAGCCTGCCTAATGAAGACATGAATCCTGCAGAAGAAGAAATACCTTTAATTGATAACGACACAATGTCTGAACAGGGTTCAGGGATATTGTCATCAAATACAAATGAGCTACAAGGTACAGAAAAGAGAAACATAGAGAAAGAACCGCAAGAAGAAAGTCCTTTATTAAATACAAATAAGCTACAAAAAACAGAAAATAGAAACATAGAGAAAGAACCGCAAGAAGAAGGTAATTTTACTTATAATGATGGTATTTTAACTGACCATGGATCTAACGACACACTACTCAATATCGTTACTAATCTTTTATCGCCGAGTACAAATGTGTCCAAAGATACCCCCGCTGAAAATTCAAGTTTCGATTTGCCTGTAGCATCCATTAATAAGTTTCAAAAGACTGTAAATAACAATAATGAAATTAAAGACACTGAGAACATACCAGAAAAGATTCAGTGCCTCTTAGATGCTGTCCCATCGTCATCAATTACCATTGCATGTCAAAATAATCCCATTGAACATAACTCTAATGTTTATCTCAATTTGCCTGTAGAAGATAAAATCCCTGTACCTGGACCACCACATGGCACAAACATATACTCATCTCAAGAGCAACCTCATTCTTCCCGAGTACCTTATGAAGATATCACAACTGATAATGTAACACCACGTAAAAAGTCTATGGCAACGGTTTTAGGTGTGACAATCCCATCTCCCTTTAAGCATAGTTTATTTTGGCCTGAGGAAGAACTAAATAAGAAAAAAAGAATCAAACGAGAAAAAATACCATTTACAGTAACAAGCAAGGCGTGGAAACAATATCACGAAAAAAAGGAAATGGAAAAAAAGAAACAACAGGAGGAAAAAGAAAATAGAGCTAAGCAGAGAATAGAAAAAAAGAAATTAAAAGATCAACTTGCTCAAGATAAAAATAAATCTAAACTGAAAGTAAAAGGAAAAAAAAGAATTCGTGAAGAATCAACGTCGGAACATACTGATTTAGAGATAACATATGCTGAGAGTGATGATGGTTATAATATAGAAGATGACGAGATATCAGATGTAGAGATTGCACTAAAAGAAAAAAAAAACATTTCAGTCTAA
- Protein Sequence
- MALRKDYAPEQMEKAIEAVRRGEKVAVAAKTFGVPRITLYDKVTGKTPVGCAMGPSTVLTKTEEDVLSFLKRHPILAQKVPDNLTRARDTVTENDILNWFQEINVYLEDKNLKAVLADPNRVFNTDESAFFLSPKPGRVLAKRGEKHLYSACGDDKENLTVLITANASGVLAPPMIIYNYERIPAYISAGIPDEWGVGKSDTGWMCSNTFYEYVTNVFNPWLEQNSIEKPVLFFLDGHKSHLTLHLSNFCSGNGIEVIALYPNSTHILQPMDLSVFRPLKVYWKKAVNEWKMENLGQNLRKENFASVLQTALKNISKDPIKNGFRAGGLFPFGPDYIDFSKIKHTQVSSKEKVIDPAQSEFVKYLDKEIVKIFSTQKLQQFNDFFYKDRNALENSLPNEDMNPAEEEIPLIDNDTMSEQGSGILSSNTNELQGTEKRNIEKEPQEESPLLNTNKLQKTENRNIEKEPQEEGNFTYNDGILTDHGSNDTLLNIVTNLLSPSTNVSKDTPAENSSFDLPVASINKFQKTVNNNNEIKDTENIPEKIQCLLDAVPSSSITIACQNNPIEHNSNVYLNLPVEDKIPVPGPPHGTNIYSSQEQPHSSRVPYEDITTDNVTPRKKSMATVLGVTIPSPFKHSLFWPEEELNKKKRIKREKIPFTVTSKAWKQYHEKKEMEKKKQQEEKENRAKQRIEKKKLKDQLAQDKNKSKLKVKGKKRIREESTSEHTDLEITYAESDDGYNIEDDEISDVEIALKEKKNISV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00640260;
- 90% Identity
- -
- 80% Identity
- -