Esim027416.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Elegia similella
Gene Symbol
-
Assembly
GCA_947532085.1
Location
OX383937.1:22158996-22186032[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-08 2e-05 25.0 0.0 4 39 16 52 13 57 0.85

Sequence Information

Coding Sequence
ATGCCTCGAAATTATGTGCGTAAGCCAAAAAGTTATGACGAACTTAAGTTGCACGAAGCATTGGAAGCGGTGAGAGAAGGCAACTTATCACTGAGAGAGGCCGAAACAAAATATAACATTGATAAATCTTTGTTATGGACGCGAATTCACAATTTAAATACAACTAAACAAGGAAGGAAAACGGTTTTGACCAAAGAAGAAGAAACAGACTTGGCTGAAAAGATTAGAATAATGGCGAAATGGGGTTGGGCGCTAACAAGACAAGAGATCAAGAATATAGTCCATACCTATGTGGTTCAAAAAACCATCAAAAATAATTTTAAAAATGACTACCCTGGCAAGAACTGGATGATTTCATTCTTTGAAAGAAATGGATTAGTAACAAAAAAATTAGAACAATTGGTAAAATCTCGGCGCAAAGCTACCAGTGATCCTTTTATTATTTATCACTTCTATGATTTATTAGACACGACAATGACTTCTTTGAATTTGCACGACAGACCACAAAATGTATGGAATCTAGATGAGACATACTTCTCTTATGATCCAGGACGTGTTAAAGGAGTTACAAAAAAGGGTCAGAAGGCTCACAGAATTATACAGGGGTCTGGAAAAGAAAACACAACTGTTTTAGGATGCGCTTCTGCAAATGGGAAATTATTGCCACCGTTGATAATATTTAAAGGTCAAAATCTCTGGAGTTCTTGGAAAGGAACTAATGATATCCCAGGAACGACTTATGCATGTTCGGAAAATGGATGGATGATGACCAGCATTTTTAACGAGTGGTTTGCCAACTTTTGCAAGACTGTGGAGGAGAGACCATTGCTTGTAGTCTTCGACGGACATGTTACTCATCTAGATCCAGCTACGATTGAACTAGCATTACGTGAAAATGTGTCGCTACTGAAGTTGCCAGCCCATACCACAGATTTACTGCAACCAATGGATCGCAGTTTATTCGGGCCGATTAAATACAAATGGAATGAAAGACTTATTGATTGGCAAAGATTAAACCAAAGACCTCTTACGAAATCAGAATTTTGCAATCTTTTAGGGGAAGTCTGGCGTGAAGGAGTGTCAGAAGATGTAATAAAGAGATCATTCAATGTAACAGGAATTTATCCAGTAAACAAAGATGCTTACCCAAAGGACCGCCTTGATCCAGAAAAACTAGAGAGATTCAATAAAGCTCAAGATAAAATTAAGCAAACAACCCCGACCACAGCCAAAAGAAGAAAAATAGATGGCAAAGGTAAAGTTTTAACAACCGAAGATTACCTAAAGAGTATTGAAAATCTAAACAAAGAGAAAAAAAAGAAGATAACCAAGACTAAACAAAAACCAAAGACTAAAAAACGGGTACGAACACTGTGTCGACAGGAGTCCGATACAGATTCAGATCTGGTCTCTGATATAGACGTTCAATATGACGATGAGAGTGATATTGAAAATTACACTTTGGCAAATATTATTGAGGATGAATGTGATAGAGAATTCAATGTGGGTACACCTGCAATAAGCCAGCAAGCAGCTAGCTGCTCAAACGAGATCTATGAGGCAGAAAATAAACAAGAAGATGAACCACTCGAGACCGAAGTTAACGTGATCCCGACATTAAAAACCTCTGAAGATGCCACTACAGAAAAAACAATCTTCGAAATCAATTTGATTAAGATTCTTTATCTCGAATCTACCTATATCGACCTATCAGTATCAAACTTTGTTAAAATGGAGATATGCAGAGCTTGTTTACTAACAGAACAAGATATGGTAGCTCTGGACGAATTCTCTGTGACAAGCTACACTTTACTCACTAATTTAAAGGTCACTTTAGGCGATGAAAAGCCTCAGTTCTTTTGTCAAAATTGTTTCAACATGATTAAAGTTTTTGTAGACTTCAGGGAAAAGGCTATTTCATCCGATGCAATGTTGCAAGACATCTCAGAGAATACAAAACCTGATATGGATTCTGTTAAAGCCGAGAATCATTATGATGATGACACTGTATTTGATTGTGAAGATAATTATGCATTCAATGACGAAGATTCAGCAGTCTGTAAAAACAATATAGACACCAATAAAGAAGTAAAAGAGCCAAATACTCATGCGGAAAAAATATCCCTGCAGTGTGTTTTATGCCAAAAGCAGTTTTCAGACAATATCGCACTAATGGAGCACTTGGTTGAACACAAAAGAGGAGCGAAATGTAAATTATGTTTAGAGAAAGTGCCCCTTGCCGATTTGTATGCACATACACTTCATCATCTTCCACATATGGTGCCACCAGAACAGGTTTTGGAATCACAACAAGTAAAACTGGAAGTCCCGAATGAATGTGAACAACCATATTTTGTTAATAGTGCTGCCGACTTCGAAAATGTCATGAACACTCTGCATCCTGATACAGTAAAAGCTGGAAAGACAAGAAAAAGCGAGAGAAAGATAAAAAGTGTTATAAAGTGCACTAAAGAGTCCAAAGTGTCTGAATTTCTGCAACAAAACTTACTGCACTGCGGTCTCTGTAAAATGAAGTTCGATTCCAAGGAGTTGTTAATAAAGCATTTGGAGGGCCACAAGTACCCCGGCACCGTCAGCTGCAGACTCTGCCAGGAGGCGTTCAGTGCCTGGCCGCAGCTGTTCGGACACCGCTTCTCGCACTTACCGGCCAAGCAACGACGCTGCCATATCTGTGGCTGCCGGAGTTTCTCGGAAAATCAAATGGAGTTCCATTACCGAAACTCACACTACGATGGCGAGGACAAGTTCCTGAAATGTAAGCAATGTCTTCGCCCATATGCTAACTCAAGGAAACTCTCCAAACATATAAGATCCACCCATGGAGTAAAAAGATTCTTTTGCGACCATTGCAATAAAAGCTGTACCAACAAATCGCAATTGGTTACACACATCGCGTCGCACGGCGGCGGACAGCGCTACGTGTGCGATATCTGTGGATTCTCTTGTAACTTAAAAGCTGGCTTGAGGAATCACAAAATTCGGCACTACCCTGACAGAATTAATTGCAGACTATGTGACAGAGTATTCCTGGACCAAGCCAAGGCAGACGAACACAAGCTTAACTGTAAACCAAGAAGTATGATATGCCCCGAGTGTGGAAAGGAGTTCACCAAATCAAAATTATTATCCCGTCACCTTCTAACGCACGCATCTGTGAACACGTACAAGTGCGACCGTTGCCCGGCCACGTTCCGCCACCGGCAGACGCTCAAGGTGCACCTCGACAGACACGACGGGAACCGCACCCAGCGCTGCGAGTACTGCGGCGCCTGCTTTTACAGCCTCAACGTGCTGGTCAAGCATCGGCGCGTGCACACAGGGGAGAAACCGTATGTTTGCAAGATCTGCCACAAAGGGTTCACCGGCAATCACAACCTTAAAGTCCACATGCGGATCCACGGGGAGGACCTCATCGTCAAGAGAATCAATCCTTCAAAGACTGAAGAATTTCTGCCAATTAAATAG
Protein Sequence
MPRNYVRKPKSYDELKLHEALEAVREGNLSLREAETKYNIDKSLLWTRIHNLNTTKQGRKTVLTKEEETDLAEKIRIMAKWGWALTRQEIKNIVHTYVVQKTIKNNFKNDYPGKNWMISFFERNGLVTKKLEQLVKSRRKATSDPFIIYHFYDLLDTTMTSLNLHDRPQNVWNLDETYFSYDPGRVKGVTKKGQKAHRIIQGSGKENTTVLGCASANGKLLPPLIIFKGQNLWSSWKGTNDIPGTTYACSENGWMMTSIFNEWFANFCKTVEERPLLVVFDGHVTHLDPATIELALRENVSLLKLPAHTTDLLQPMDRSLFGPIKYKWNERLIDWQRLNQRPLTKSEFCNLLGEVWREGVSEDVIKRSFNVTGIYPVNKDAYPKDRLDPEKLERFNKAQDKIKQTTPTTAKRRKIDGKGKVLTTEDYLKSIENLNKEKKKKITKTKQKPKTKKRVRTLCRQESDTDSDLVSDIDVQYDDESDIENYTLANIIEDECDREFNVGTPAISQQAASCSNEIYEAENKQEDEPLETEVNVIPTLKTSEDATTEKTIFEINLIKILYLESTYIDLSVSNFVKMEICRACLLTEQDMVALDEFSVTSYTLLTNLKVTLGDEKPQFFCQNCFNMIKVFVDFREKAISSDAMLQDISENTKPDMDSVKAENHYDDDTVFDCEDNYAFNDEDSAVCKNNIDTNKEVKEPNTHAEKISLQCVLCQKQFSDNIALMEHLVEHKRGAKCKLCLEKVPLADLYAHTLHHLPHMVPPEQVLESQQVKLEVPNECEQPYFVNSAADFENVMNTLHPDTVKAGKTRKSERKIKSVIKCTKESKVSEFLQQNLLHCGLCKMKFDSKELLIKHLEGHKYPGTVSCRLCQEAFSAWPQLFGHRFSHLPAKQRRCHICGCRSFSENQMEFHYRNSHYDGEDKFLKCKQCLRPYANSRKLSKHIRSTHGVKRFFCDHCNKSCTNKSQLVTHIASHGGGQRYVCDICGFSCNLKAGLRNHKIRHYPDRINCRLCDRVFLDQAKADEHKLNCKPRSMICPECGKEFTKSKLLSRHLLTHASVNTYKCDRCPATFRHRQTLKVHLDRHDGNRTQRCEYCGACFYSLNVLVKHRRVHTGEKPYVCKICHKGFTGNHNLKVHMRIHGEDLIVKRINPSKTEEFLPIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00640787;
90% Identity
iTF_00640787;
80% Identity
iTF_00640787;