Eagr004212.1
Basic Information
- Insect
- Eledona agricola
- Gene Symbol
- stc
- Assembly
- GCA_964023215.1
- Location
- OZ026854.1:11014667-11029450[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 2.1e+04 -4.0 3.0 6 10 298 302 294 302 0.61 2 14 0.77 8.7e+03 -2.8 0.5 4 10 328 334 328 334 0.90 3 14 7.4e-06 0.083 13.3 13.1 4 18 343 357 341 358 0.93 4 14 2.1e-07 0.0024 18.2 11.4 1 18 394 411 394 412 0.98 5 14 0.63 7.1e+03 -2.5 0.6 6 10 442 446 441 446 0.89 6 14 1.2e-10 1.4e-06 28.6 10.5 1 18 452 469 452 470 0.98 7 14 5.6e-07 0.0064 16.8 15.4 4 19 517 532 510 532 0.87 8 14 1.2 1.4e+04 -3.5 2.0 5 10 561 566 561 566 0.93 9 14 0.0027 31 5.0 8.3 1 11 572 582 572 584 0.96 10 14 1 1.1e+04 -3.2 1.0 4 10 587 593 586 594 0.68 11 14 5.3e-10 6e-06 26.5 14.1 1 19 599 617 599 617 0.98 12 14 0.00062 7.1 7.1 12.0 1 19 656 673 656 673 0.89 13 14 6.3e-09 7.1e-05 23.1 14.5 1 19 709 728 709 728 0.97 14 14 0.0089 1e+02 3.4 17.3 1 19 738 757 738 757 0.96
Sequence Information
- Coding Sequence
- ATGTCGTATTGGGGCACTTACGAGGATCATTTGCAGCTGGGATACCCAGGATGTGATCCGGGCTATGTACAGTACTGCAACATGCCGTATTATAACGAGTCTCATGGCGCGAGTCCCGGGTGTGATTTGTACAGTGGGCAATCGTCGCATCAAACCTACTATGAAGAGACCGCTTCTGGGAGTAGTTACGTCCCAAACGACTATACAGGGACCAGAGAACAGTCTGACTTTAACAGAAACAACGGAACTGTGAAAAAGAAGCCAAACGAACGGAATGGTCGAAATTGGAATAACGGGAAACGAAACGAGAGATACGGAAGTGGAAGAGTTTTCAGTAATCGCGACAGGGGGCGTGGCGAACCTGACGCGAGGTCGCAAACATTTGAAGCAGCAAATGAAGAGGGCGAAAGTGGTGCCAAACCTAAACATAAAAATGCCCAAAGGAGCGATGGAAGAAACTATTACCAGAATAACAGTTACAGGAACAGTTATGTGGATAAGAGAAATAACTATAGAGGTAGAGATAAGGAACGGTTTGATGGTTATGAGGGTAGGGGGTATGGACGTTACGGCAAGCAGAATTACAAGAGCTATGAAGAGGTTGATGGGACTCGAGATGATGTGCGCGAGAAAAACCACTGGCGTGGTTATAATGGCAATCGCAAGTGTAATACAGCAAAATCGCAAAAGAAATTGGACGCCGCTTCGCAGCGCGAACGTCTTGAGCAAATGCTCTCCCATCGCACTTTAGAGTGCCTAGTTTGCTGCGAGAAAATCAAACACACCGATAAGATTTGGACGTGCCAGCAGTGTTACCACATCCTGCACTTGAACTGCATCCGCGCCTGGGCCAATTCTTCAAAAGTGGAAACGGGTTGGCGATGCCCCGCCTGTCAGAACGTCTGCATCGATATCCCGACTGCTTACACTTGCTACTGCGGCAAGGTCCACGAACCCAGACCTGTCCCGGGCGTCGTACCGCACGCTTGCGGCGATACTTGCATGAAACTCAGACGCAACTGCGACCACAAATGCACAATCCTCTGCCATCCGGGGCCCTGCCCCGACTGCAACGTCATGATCGAGAAACTGTGCGGTTGCAGCGCCACCAAGCAAACCGTTAAATGCTGCTCGGACACAGAAATTGTCTGCAATAATGCGTGCAACAAGCAATTGGAGTGCGGATTGCATTATTGTCGGTCGCAGTGTCACTCGGGTTTGTGCGGGCCCTGCGACAAGACCTTACAACAAGTTTGCTTCTGCGGAAAAGTCGGCAGGAAAGTTTCGTGCACCAGCGAGTTCAAAGGCGCCACGAGTTACTCGTGCGAAGACGTTTGCGCAAAGAGTCTGAGCTGTGGAAACCACAAATGTGAGATGATATGCCACGACGGTGATTGCAGGCCGTGCGTACGCGACGCGTCCCTGATCGAGAGTTGTCCATGTGGGAGGACGCAGTTGAAGGACGTCAGAACGTCCTGTTTGGATCCCATTCCCTGCTGTGATAAATTGTGTGCGAAGCCGCTACCGTGCGGCCAACCCGCTGCTCCCCATTCCTGCAAGGACCCCTGCCATGAGGGTCCTTGCCCGTCCTGTCCCCTGACCACGTTAATTCGCTGCCGGTGCGGCCACATGGACCGCGAGATCCCCTGCGAACAGTTGACCACGAAAGCGGACGACGCCCGCTGCGAGAAGAAGTGCACCAAGAAGCGGCTCTGCGGCAAGCATCGTTGCAACCAGCGCTGTTGCATCGAAATCGAGCACGTGTGTCCGCTTCCCTGCAACCATCTGCTCAGCTGCGGCAACCACAGATGTCAGCGTACTTGTCACAGCGGCCGCTGTCTGCCTTGCCAAGAGACCAGCTTCGATGAGCTGTACTGCGAGTGCGGGGCCAACGTGCTTTATCCGCCGATTCCGTGCGGAACGAAACCTCCGATCTGCAACAGTCCCTGCTCGCGGCCGCGTCCGTGCGGTCACGAAGTCAACCATGCGTGTCACACCGGTGCGTGTCCCCCTTGCACGGTGCTGTGCAAGCGCTGGTGTTACGGTAAACACGAACAGCGGTCGGCTGTGCCGTGCTATCAGGACGACTTCAGCTGCGGATTGGCCTGCGGGAGGCCCATGGCGTGCGGGGCGCACAAGTGCGAGAGGCCCTGTCATTTGGGACCGTGTCCCCTGCCCTGCAAGCAGAAGTGTAAAGTGAGGCGGGCGCACTGCGGCCATGCGTGCGGTGTGCCCTGCCACAAGCCCCCGTGTCCGGAAACGCCCTGCAAGCAGAACGTTCCAATAACGTGCCAGTGTGGATTGCAGAAGAACACCAGGCCTTGCATTGAGCTGGCGGACGAGTACAGGGAGATGGAAATGGCGAATCTGAAAGATAAGATGTCCGACATGATGAAGGATCAAGCTGTGGACATCAGCGATATCGTCAACAAGCCGAAGCGGCCGTCAGTTTTGAAAATTTTGGAATGCAACGAAGAGTGCCGTGTCCTGGAGCGCAACCGGCGTCTCGCTATAGGCCTCCAAATCCGCAATCCCGACCTAAGCCAGAAGCTGACGCCTCGCTACTCCGATTTCATGCGCGGTTGGGCAAAGAAAGACCCTCAGTTCTGCCAGAAAGTGTACGACAAGCTCAGCGAGTTGGTCCAGCTGGCCAAGCAGAGCAAGCAGAAGAGTCGGTCGTACTCGTTCGAGTCTATGAACCGCGACAAGCGTCATTTCGTGCACGAATACTGCGAACACTTCGGATGCGAAAGCGCCGCCTATGACATGGAGCCTAACCGAAACATCGTCGCCACAGCTTTCAAGGACAAGTCGTGGCTGCCTAGCATTAGTCTTCTCCAGTTTCTTCAGAGAGAAAACGGACAACGCAAGGTACCGGGACCCGTGCTGAGTAAGGGACTGTTGGGAAAATCCGAGACGGTTGCGCTTAAACTGCCGATGAGGTCGCAAAAAGCGAGCACGCCGCCTGGGGAATGCGTGGATTACTTCGATAATCCGCCCGTGTAA
- Protein Sequence
- MSYWGTYEDHLQLGYPGCDPGYVQYCNMPYYNESHGASPGCDLYSGQSSHQTYYEETASGSSYVPNDYTGTREQSDFNRNNGTVKKKPNERNGRNWNNGKRNERYGSGRVFSNRDRGRGEPDARSQTFEAANEEGESGAKPKHKNAQRSDGRNYYQNNSYRNSYVDKRNNYRGRDKERFDGYEGRGYGRYGKQNYKSYEEVDGTRDDVREKNHWRGYNGNRKCNTAKSQKKLDAASQRERLEQMLSHRTLECLVCCEKIKHTDKIWTCQQCYHILHLNCIRAWANSSKVETGWRCPACQNVCIDIPTAYTCYCGKVHEPRPVPGVVPHACGDTCMKLRRNCDHKCTILCHPGPCPDCNVMIEKLCGCSATKQTVKCCSDTEIVCNNACNKQLECGLHYCRSQCHSGLCGPCDKTLQQVCFCGKVGRKVSCTSEFKGATSYSCEDVCAKSLSCGNHKCEMICHDGDCRPCVRDASLIESCPCGRTQLKDVRTSCLDPIPCCDKLCAKPLPCGQPAAPHSCKDPCHEGPCPSCPLTTLIRCRCGHMDREIPCEQLTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHVCPLPCNHLLSCGNHRCQRTCHSGRCLPCQETSFDELYCECGANVLYPPIPCGTKPPICNSPCSRPRPCGHEVNHACHTGACPPCTVLCKRWCYGKHEQRSAVPCYQDDFSCGLACGRPMACGAHKCERPCHLGPCPLPCKQKCKVRRAHCGHACGVPCHKPPCPETPCKQNVPITCQCGLQKNTRPCIELADEYREMEMANLKDKMSDMMKDQAVDISDIVNKPKRPSVLKILECNEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFMRGWAKKDPQFCQKVYDKLSELVQLAKQSKQKSRSYSFESMNRDKRHFVHEYCEHFGCESAAYDMEPNRNIVATAFKDKSWLPSISLLQFLQRENGQRKVPGPVLSKGLLGKSETVALKLPMRSQKASTPPGECVDYFDNPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -