Basic Information

Insect: Eledona agricola
Gene Symbol: -
Assembly: GCA_964023215.1
Location: OZ026859.1:8988576-9000474[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.12 11 7.1 2.0 1 23 75 97 75 97 0.97

2 16 0.02 1.8 9.5 1.9 2 23 103 124 103 124 0.98

3 16 0.0005 0.046 14.5 4.4 1 21 130 150 130 152 0.94

4 16 2.1e-05 0.0019 18.9 2.8 1 23 158 180 158 180 0.98

5 16 0.025 2.3 9.2 1.1 5 23 1126 1144 1124 1144 0.96

6 16 0.00041 0.037 14.8 5.2 2 23 1151 1172 1150 1172 0.97

7 16 0.00013 0.012 16.4 0.4 1 23 1177 1200 1177 1200 0.97

8 16 0.00083 0.075 13.8 0.2 2 23 1204 1225 1204 1225 0.97

9 16 2e-05 0.0018 18.9 1.5 3 23 1233 1254 1231 1254 0.95

10 16 1.2e-06 0.00011 22.8 1.9 1 23 1261 1283 1261 1283 0.98

11 16 0.00028 0.026 15.3 2.3 1 23 1287 1309 1287 1309 0.97

12 16 4.1e-06 0.00038 21.1 2.6 1 23 1315 1337 1315 1337 0.98

13 16 0.0037 0.34 11.8 2.1 1 23 1343 1365 1343 1365 0.97

14 16 0.00025 0.023 15.5 3.3 1 23 1371 1393 1371 1393 0.98

15 16 0.041 3.8 8.5 6.5 1 21 1399 1419 1399 1423 0.90

16 16 7.5 6.8e+02 1.4 1.0 2 23 1432 1454 1431 1454 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.12	11	7.1	2.0	1	23	75	97	75	97	0.97
2	16	0.02	1.8	9.5	1.9	2	23	103	124	103	124	0.98
3	16	0.0005	0.046	14.5	4.4	1	21	130	150	130	152	0.94
4	16	2.1e-05	0.0019	18.9	2.8	1	23	158	180	158	180	0.98
5	16	0.025	2.3	9.2	1.1	5	23	1126	1144	1124	1144	0.96
6	16	0.00041	0.037	14.8	5.2	2	23	1151	1172	1150	1172	0.97
7	16	0.00013	0.012	16.4	0.4	1	23	1177	1200	1177	1200	0.97
8	16	0.00083	0.075	13.8	0.2	2	23	1204	1225	1204	1225	0.97
9	16	2e-05	0.0018	18.9	1.5	3	23	1233	1254	1231	1254	0.95
10	16	1.2e-06	0.00011	22.8	1.9	1	23	1261	1283	1261	1283	0.98
11	16	0.00028	0.026	15.3	2.3	1	23	1287	1309	1287	1309	0.97
12	16	4.1e-06	0.00038	21.1	2.6	1	23	1315	1337	1315	1337	0.98
13	16	0.0037	0.34	11.8	2.1	1	23	1343	1365	1343	1365	0.97
14	16	0.00025	0.023	15.5	3.3	1	23	1371	1393	1371	1393	0.98
15	16	0.041	3.8	8.5	6.5	1	21	1399	1419	1399	1423	0.90
16	16	7.5	6.8e+02	1.4	1.0	2	23	1432	1454	1431	1454	0.91

Sequence Information

Coding Sequence: ATGGAGCAGAGCTCCGTGTCCACTGACAGCCACGAAGACGAGTTCCAAGACACGAAACCCCTCAAGCCACTTTTACCGAATTCCCTGACTGAAACGATCTCCGTCAAGCAGGAACAAGAATACAACTCTAGTCATCATTTCGAAACCGAAGAGAATCACGTCGTAATCAAAAGCGAGGATCGCGCAGAGGACACCAATGACCCCGACAACGAGAGCACCGTCTACAAGTGCATAATGTGTTCAGAAGAGTTCAAAGTGTTCGCCGACTACAGAAAGCACAGGAAGCGGCACTTCATCGACAAACGAACGTGCAAGGTTTGCAAACTCGTGTGCCAAAGCATTAGCAAGTTGGAGATCCACATGAATTCGCATTTGGGGCTGAAGCCTTTCAAGTGCGAAGAATGCGGAAAGCACTTCGTCTCGAATAACCAGCTGAAGCTGCACGGAAGGTGCCACTCGGACGAAAAAAGGTACTCCTGTCAGAAGTGCAGCAAGGCCTTTAGGCACTTGGGGTCTCTGAGGAGTCACATGGTCACCCACAACGACATCAAGGAGTTCCAGTGCAAGcGCCAGCAGTCCGTTAGAAACCGTGAAGCATCGAGAGGCGACGGCTGTGTCCAACAGGGGTTCAGCGACGACCGCAAAGGAACTCAAGCGACCAGTGTCCATCTCCTGGGAGATCAGCGACGCCCACGacgtccgttctccaggaatccagaagctgtaagcgaccgcagcgtccaggcagcagaagttccagcaacgaggaacaTCCATGAAGCCGACTTAAGAGAAGTCGCACAACGAAAGAGCACATGCGACCCCAGCGTCCATCAACTCAGGggagatccagcgaccgcagcgtccatctCCGAGAAGCCATGCGACCGTAGCGTCCACTCAGCAGGAGAATCAGCGACCGGAGCGTCCATTCTCCAGAATCCACGCGACCCCAGCGTCCGATCTGCAggagatccagcgaccgcagcgtccgcgGTCTTCAGAAGTCCAAGCGAGATCATCACCGAAGAGAGAAAGGTCAGTCCTAATCTAACTTCCTCTGCTTCACATTTGAACCAATTCGATTCGACAAGCGTGCAAGGTAGCAGTTCCGATAACTGGCCTTCACCATTTTCAGTAATTTGTTCCATTTCATTCGGCCGCGCGTCGCGAGTGAAATTCATAAACATGACCGAATCGACTTCGGCTCATTTAAATTGGCTAATTGTATCCCGCGATGCAATAAAAGGTAACATCCAACGGATAAGGCGATTCGTGGAGCGGTTTAACAACGAACATGATGTGTACGAGTTAATGTCGCGACTCGACACAATGCAACCGATGGCCGACGAATTCGCGACCGTTCAAAGAGAAATCGAGTCAATTCTGAAATCTCCCGACGATGCCGAAAGAGACGCTTTCGACGGGCAGTTTCATAATACACGTGCAAAGATCACAACTTTATTAGAACAACGTAAAGTAAATTTTGCAATTCCAACATCGGCAACCGCGGTTCCAACGAGGAACCCGACCGCGGCTTTCGGTCTACCGGCCTTCAGCGACCAAGACGGCGGAATCAACGAATGGCGTAAAGTCGCGTCCGATCTTGTCGGGGAGATTGCGGTACCGGAAGGCCCTCCAGATTCAATCGATGAATCGAAGGGTGAGATAACAAGACGCACCTCCAGGTGCCAGAGCAAACGTGACGGCGACGAGCTCGGTCGGTCACACGAAAGCCGGAAACGCGTAGAGGAGCTACCGATTCTGAGCGATGAGACGAAGCATTTGAGCAATTTCGCGTGCGAACCGTTCGGCGAAAACGGCGAGACGCAAAGTGGTCTAGCGGCGGCAGACCGCGAACGGGTTGAGAGCGGCGCGAGCGCCCAAAAGGGTCCGAAGACGACGAGCGTCGAGGACAACGAATCgactgagaagaaaactcatgaAATTGATCAGAATGCGTGTATGGAAAACGATTCCGACTTGAGGAGCTCGGAGCTCTCCACACACGCGAAGCAGACATCCGAAAGTACGACGAAACTTGTCGGATCGTCATCAAGCGCGAACGGGCTAGCAGTATGTGCGAGGCTGCTAACGGCGCGCAAACGGTCAATAATTCGAAAACAGCCGAAATCGAAATGGTCATTGGACCAGTTGGCAGCCGTGCATGTTACGAGAACATGTGCGCAATTCTCCGACGtactcgcggaaccggccgcggtacgggtcggaatcggaacttcggAGCGGTTTTCAATTAAAGATCATGTGTTGCGTTCAGAGGCTTCCCGTGAGAAGCACCGGGCCACTTTTGACATTAGCTCGGGTGCACCGGGCAGCAGATGTAAGGCGAAATTCACGAAGTCAAGGAGTCGCGTGTCACTCCAACAAATTGTTGCTGAATCGAAATCGGAGCTCGGTACGGCTCGCCGATTAGCAAAATCAGTCGCGAGGAGCGCGAGTTTGTCGAAACCAAACGTCACGAGAAAGAGCGGTGTTATGACGAGGAAACCAGTTCGGTTGAAGGAGTCATCCGCGGATCGGCATGGGTCAATTGCGATTCGCGGAGTCGACGTCCGAAATTTGAGCGCTTCGGTGAAACCGCGGCGTGTGAATCCCGCGAGCGAGTCTGCGAGTCTGAGTCGCAGAGTCGTCGCATTCAAGCCGCCATCGAAGCAAGTGACTTGGGCACGCGGCCCAGAGTTCACCCAGGCAAGTAACGATCAGCCGCGAAACGGTTTGCGCTTAGAGCCGATGAATGCGTCGAGAGCGCGAAAGAAATCCCGGTTTCGCGGTGTCGAGTCGAAAGACGAAGGCGATTTCGGTCCAGTTTGGAGATTTCGCGAATTGCAGCCAGCTATCAGGCAATTAGCCAAGTTGTCTTTCGTCCGCCAGCGAATCTGGCAATTGTTGAACCGAATGTCGGGTGCGGTCAAATCCCGATCGAAACGCTTCGCAGCGATGGCCGAACGAATTGTCGCGCAGATTGAAACGTTGACGTTGTCGAGTCGGGTCCGGTTTGAATTCCCGCCCCACATTCCTCGTGTCCCATTCATTTGGCCACCTCCAACCCCGACCCCTTGGCCTTTCAACAAGCAGAGGTCCGGTGACTTCGCGGAACGCATACGACTTGGACGACTTCCACACGAGCAGGCTATCCCGATGTCAACGAAGCGCGACTTCGCTCACATGCGAGTGAGTTCGCGAGGATGCGGTACAGCTGCGGGTCCGTCTCAAGTGATCGTTCCGGACTGTGATCCTCCAGTCCAGGATTTGGACATCGTCCCTGAGGACAATCAACCATCGCTTCGTCAGAAGATGGGCAAGGTTCGCCTGTGCATCTCATCTTGGACGTTTAGCGCTGGTGATGATTGTATATGTGGCGAGAGCTGCTCCAACCTGCAAACATACCGCAAACACCTCGAAACCCACGGCCAAATCGTCGAAATAAAATGCCAACTCTGCGACAAGCACTTCTCGACCGATCGCCACCTCCAAACGCACCTCAACTCGCACACCGAACTGCAATATCCGTGCGAATACTGCGAGCGCATCTACGCTTCCTTATACCGCCTCAAAAGGCACATAAAGCGCGCCCACATCCCCAACGTGTGCGACGAATGCGACGCCGTCTTCTACGACCGCGCCCTGTACACCAAACACCGGAAACAGCACAACGAAGGCAAGCCGGTGAACTGCAACTACTGCGGCAAGACGTTCGACAAGCAGAAGAACCTGAGCGAGCACAAGCGGCTCCAGCACAAGGAGGACGGGAACCTGCACAAGTGCGACCTGTGCGAGAAGACGTTCATCAACGCCTCGCTCCTCCGCAACCACATCAAAACGCACGACAAGTGCTTCAAGTGCAAGTACTGCGCCAAACTCTTCAGCTCGAGGTACAACCTCGAGACGCATTCCGTCACCCACACCGGCGAGAAGAACCACAAGTGCGACGTCTGCGGAAAGGTCTACTCGACAAAGACCAGCCTCAAGAACCACAAAGCGACGCACAGCGAGGCCCGGAACTTCAAGTGCGACCAGTGTCCCAAACTCTTCAAGACCAACAGGCGACTCTACGTCCACAAAATCTCCCATTCGACCGAGGAGAAGTTCCAGTGCGAGATTTGCCACGCGCGCTTCAGGGTGAAACAGTACTTGAAGTACCACATGATCAAGCACTCCACCACAAAACCGTACGAGTGCAAGGTGTGCAAGAAGAAGTTCAAGCACAAAAAGTCGTGGGATAAGCATTCGAACCACGACAAGCATTTGATGAAGGTGAAGGAGACGCAGCAATGTAGTTTCTGTCTTGCTGCGTGTCTCACCAAAACCGATCTCTTAGAACACATTAGATTATATCATCCGTACGAGGCTGATGGTGAATCTTCCTGTAAAAGCGAGGCtgtagatttatttattaaaaaagaaaacgACGTGTAA
Protein Sequence: MEQSSVSTDSHEDEFQDTKPLKPLLPNSLTETISVKQEQEYNSSHHFETEENHVVIKSEDRAEDTNDPDNESTVYKCIMCSEEFKVFADYRKHRKRHFIDKRTCKVCKLVCQSISKLEIHMNSHLGLKPFKCEECGKHFVSNNQLKLHGRCHSDEKRYSCQKCSKAFRHLGSLRSHMVTHNDIKEFQCKRQQSVRNREASRGDGCVQQGFSDDRKGTQATSVHLLGDQRRPRRPFSRNPEAVSDRSVQAAEVPATRNIHEADLREVAQRKSTCDPSVHQLRGDPATAASISEKPCDRSVHSAGESATGASILQNPRDPSVRSAGDPATAASAVFRSPSEIITEERKVSPNLTSSASHLNQFDSTSVQGSSSDNWPSPFSVICSISFGRASRVKFINMTESTSAHLNWLIVSRDAIKGNIQRIRRFVERFNNEHDVYELMSRLDTMQPMADEFATVQREIESILKSPDDAERDAFDGQFHNTRAKITTLLEQRKVNFAIPTSATAVPTRNPTAAFGLPAFSDQDGGINEWRKVASDLVGEIAVPEGPPDSIDESKGEITRRTSRCQSKRDGDELGRSHESRKRVEELPILSDETKHLSNFACEPFGENGETQSGLAAADRERVESGASAQKGPKTTSVEDNESTEKKTHEIDQNACMENDSDLRSSELSTHAKQTSESTTKLVGSSSSANGLAVCARLLTARKRSIIRKQPKSKWSLDQLAAVHVTRTCAQFSDVLAEPAAVRVGIGTSERFSIKDHVLRSEASREKHRATFDISSGAPGSRCKAKFTKSRSRVSLQQIVAESKSELGTARRLAKSVARSASLSKPNVTRKSGVMTRKPVRLKESSADRHGSIAIRGVDVRNLSASVKPRRVNPASESASLSRRVVAFKPPSKQVTWARGPEFTQASNDQPRNGLRLEPMNASRARKKSRFRGVESKDEGDFGPVWRFRELQPAIRQLAKLSFVRQRIWQLLNRMSGAVKSRSKRFAAMAERIVAQIETLTLSSRVRFEFPPHIPRVPFIWPPPTPTPWPFNKQRSGDFAERIRLGRLPHEQAIPMSTKRDFAHMRVSSRGCGTAAGPSQVIVPDCDPPVQDLDIVPEDNQPSLRQKMGKVRLCISSWTFSAGDDCICGESCSNLQTYRKHLETHGQIVEIKCQLCDKHFSTDRHLQTHLNSHTELQYPCEYCERIYASLYRLKRHIKRAHIPNVCDECDAVFYDRALYTKHRKQHNEGKPVNCNYCGKTFDKQKNLSEHKRLQHKEDGNLHKCDLCEKTFINASLLRNHIKTHDKCFKCKYCAKLFSSRYNLETHSVTHTGEKNHKCDVCGKVYSTKTSLKNHKATHSEARNFKCDQCPKLFKTNRRLYVHKISHSTEEKFQCEICHARFRVKQYLKYHMIKHSTTKPYECKVCKKKFKHKKSWDKHSNHDKHLMKVKETQQCSFCLAACLTKTDLLEHIRLYHPYEADGESSCKSEAVDLFIKKENDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -