Eagr001084.1
Basic Information
- Insect
- Eledona agricola
- Gene Symbol
- SMARCC2
- Assembly
- GCA_964023215.1
- Location
- CAXIEJ010000074.1:127648-131156[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.1 8e+03 -2.6 0.0 30 44 390 404 388 405 0.83 2 3 1.8e-14 1.6e-11 44.5 0.0 3 44 768 809 766 811 0.96 3 3 3.7 3.2e+03 -1.3 0.0 22 42 915 936 911 937 0.77
Sequence Information
- Coding Sequence
- ATGCCAATCGACGCGCGCGCCTTCTGCTCGCCATTTTGTTTCCGCCTCGACCACCGCCCATTTTTTTTCCGCCACTGCAAAAATCAAAAAGTGTCTCTCGGATTGCACGGCGAGCAATCTCACCTCCTCGGTCTGGGCCCCTCTCGCCAACCTCCAGGGCACGCGCCACCAGAGACCAAAAGCGAGAGAAGCTGCTCCTCTCTTTTGTGGTCAGATCTCTCTCTGCTCGCTCGCGTTCGGACCGAGCAGCACCATCTTGCCACACGCCGCATGAGCGACCACGCGAACTCCCCAGCGCCCGACGGGGAACCAGCCACCGGTGTCCAACGGCCGGATGCCTCTCCAACCAGCCAAGAGCAATCTGACGCGCCAGCGAACGACACCCAGACGAACAACCAATCGGGCACTCGCATCTTCGAAGTCACCAGTGCGATCCTCACCTCCACATTCGGCGACCCCTCCATCACCGTCGAATGGATCGCCAAACTCATCGACGACCTGAAGGCATTTCAAGACACTCACTTCGGTCCACAAAACTTCCAgAATGCGCCTGCCAACCATTTCGCCAAAATCCCGCGGAAACTGCTGGACGATTGTCGAGATCCCGACGTCCTTGCTGGCGTCCTCCGAATCCTCCTCGAGTACAGACAGGCTGAGGCCATCGATCTCGACTTTGACCACCACCGACCATCTCTGCACGCTCAGCTCAGGATCTACAAGCACTTTCACACCCAACTCCGTCAAAGGGGACACTGGCAATGCCCAAACGTCGTTCTCAGCGATGAGATCCAAAATCAATGCCAACGAAACGAACTCGCTCAAATCGTCCGCAAACTCGGCGGCGCTATTTCCCACTCGAGCGATCCGATTCGAGCGACACACTGCATCGTTCCGGATCAAGCTGACTACGTCCGCGTGGTGGATCATCATCCCCCCCGTGAGGGCGACGGTCCCGACCAGACGCGCATCCATCGATGGGGATCGCCCGATTCGACAGATCAACTGGTGCCGAGACCACAACTTTGCCCCGCGCGAGGCATCCAACACGTCGGGGACCTCTTGCTCGCCAATCCAAACGTTCTCGTCGTGACCGACAAGTGGCTTTTCGACTCAGAACACTTCAACGAGTGGATGAATGAAATCGACTACGCTTTTGACCTCTCGGTCGCGCCCACACTTACCAAATACGACTGCTACTACCACCTGTCGAACCAGTACGCGCGCCCCACCAAGCACTCCTCACCTCAGCGCAAACCAACTTCCGACAGAAAGCGCCCGGCCTCGATGTCGTGGAGCGACGCTTCGGAGTCGCACGCCACGCCATCTGAACTCGACGCGCTCAAAGACGCCAAACGCATCAAAATCAACGAGCATGCCATCCGACATGTCCAAATGCTGGGCTACGCCCCTCCCAACAGCAACGAAGACCGACCGACTCCTCTTCTCTCCGACGGCCAAAAAGAGGACTCGATCTCACAGCAGCAGCCGCAGCCCTCCCACCACCACCCTCCACGAACGCCACTCGATCGTTACTCTCCCAACCTTCAATTCCCGCACCACGCCACTTGGTTCTCCATCAACACCATCCACGAAAACGAAAAACTCGCTCTACCCGAGTTCTTTGTCCAAAACTGCCTCGCTCGCTCCACCAACAAAACACCGGAAATCTACCGCGAATACCGCGACTTTATGATTCACGCCTATCAACAAAATCCAGCTTACTACCTGACCTTCACCGCCTGTCGCCGCAGCCTCGCTGGCGATGTCTGCTCCATCATCCGCGTCCACGACTTCCTGGAACACGTCGGATTGATCAACTATGCCGTCGATCTCAACGCCCAAACAACCACGTTCCCCTCTACACCGGACATCCGCAACACCGCCGCTTCCTCCTCCAATCCTCCTCTCCACCACGCCCACAAAGGCACGCCTGACCCTTCTCAACTCGCCTCGCCCTCCCCCATTCCTCACCTCGACCCAACTTCGCCAACTTCTGGCGACCCTTCGGTGACTGCCTCTCGACTGTCTCACCCAATTGAACCGACTCCCACGGACCAGGCGGCCTCCAACCGACGTCAAGAAGAGACATCTGAACTCGACTCGCTCAACAACGCCAGCTGCTCCAGCTGCTTCTCGAACATCGCCGCTTCCTCTTCTTCCCACAAACCGCCGTATTATTATTACCAACATAAACAACACTCAACGACCATTCTCTGTTCAGACTGCTTTCTTCGTCGCCAATTTCCGGACAACTCGACTCCTTCTGATTTTTTCTGCCACTCAATCGCCCAGCCAAGCGACGCCTGGTCTCATCGAGAAACACTGCGCCTTCTGGAAGCACTGGACCTCTATGGAGACGACTGGTCCAAAATCTCCGAACACGTCGGATCCAAAAGCAAGCAAAGCTGTATCTTGCACTTCTTGAACTCCCCTATCATCGACCAAGACCTCCCCTCAGACGACGCCAACCACGCGGCCCCATCATCATCTGTCGACTTTCAAGACAATCTCCCTCCATCTCCCGACCTTCTCCTCTCCAACACCTGTCATCCTATCGTCTCTCTTCTCAACTTTTTGAAAGAATCGGTCTCTCCCAAAACAACCAAATCCTCCATTCAGTCCGCCCTTCACACCATTCTGCTTCTGGAAGGCCTCTCGGAACAACCACCACCTGACGCGGCAGCAGCATCCGTCGAATCGACTCCGTCATCGGCCGATTCGCAATGCACCCTATCCCCTCCTCATTGGTCCAAAATTCAAGCCTCCTCCTCGGCCGGACTCGCCGCGTCCTCCATCAGGGCACATCTGCTGTTCGAAAAGGAAGAGCAAGAAATTCAACGCTTGGTGTACCAGCTCATCGAAACGCAATCTAAAAAACTCGAACTGAAAATGAAACAGTTCGACGAACTCAAATGCACTTTGGACTTGGAAAGAACCAAAATCGAAGATGCTCAAAAACAACTCTATGCCGAGCGGCAACGCTTCTTGGAAGAACAATCCACCAAGTCATAA
- Protein Sequence
- MPIDARAFCSPFCFRLDHRPFFFRHCKNQKVSLGLHGEQSHLLGLGPSRQPPGHAPPETKSERSCSSLLWSDLSLLARVRTEQHHLATRRMSDHANSPAPDGEPATGVQRPDASPTSQEQSDAPANDTQTNNQSGTRIFEVTSAILTSTFGDPSITVEWIAKLIDDLKAFQDTHFGPQNFQNAPANHFAKIPRKLLDDCRDPDVLAGVLRILLEYRQAEAIDLDFDHHRPSLHAQLRIYKHFHTQLRQRGHWQCPNVVLSDEIQNQCQRNELAQIVRKLGGAISHSSDPIRATHCIVPDQADYVRVVDHHPPREGDGPDQTRIHRWGSPDSTDQLVPRPQLCPARGIQHVGDLLLANPNVLVVTDKWLFDSEHFNEWMNEIDYAFDLSVAPTLTKYDCYYHLSNQYARPTKHSSPQRKPTSDRKRPASMSWSDASESHATPSELDALKDAKRIKINEHAIRHVQMLGYAPPNSNEDRPTPLLSDGQKEDSISQQQPQPSHHHPPRTPLDRYSPNLQFPHHATWFSINTIHENEKLALPEFFVQNCLARSTNKTPEIYREYRDFMIHAYQQNPAYYLTFTACRRSLAGDVCSIIRVHDFLEHVGLINYAVDLNAQTTTFPSTPDIRNTAASSSNPPLHHAHKGTPDPSQLASPSPIPHLDPTSPTSGDPSVTASRLSHPIEPTPTDQAASNRRQEETSELDSLNNASCSSCFSNIAASSSSHKPPYYYYQHKQHSTTILCSDCFLRRQFPDNSTPSDFFCHSIAQPSDAWSHRETLRLLEALDLYGDDWSKISEHVGSKSKQSCILHFLNSPIIDQDLPSDDANHAAPSSSVDFQDNLPPSPDLLLSNTCHPIVSLLNFLKESVSPKTTKSSIQSALHTILLLEGLSEQPPPDAAAASVESTPSSADSQCTLSPPHWSKIQASSSAGLAASSIRAHLLFEKEEQEIQRLVYQLIETQSKKLELKMKQFDELKCTLDLERTKIEDAQKQLYAERQRFLEEQSTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -