Basic Information

Gene Symbol
Kdm5
Assembly
GCA_964023215.1
Location
OZ026862.1:17552334-17559962[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.5e-26 1.1e-22 80.5 0.0 2 89 112 196 111 196 0.95
2 3 7.1 1.8e+04 -3.5 0.0 48 76 798 824 796 834 0.65
3 3 0.067 1.7e+02 3.0 0.0 32 77 1229 1273 1226 1286 0.72

Sequence Information

Coding Sequence
atgaGCACAAAAGTGGATAAAGCCCTTGGCAACCCCGTTAAGGCGCACCCCCCATCGAAAATGCATCCAAAATTAGATTCGGGATACGGATTCAAGGAGGCAACCTTCGAATTTGAGCCGCCTCCTGAAGCCCCCGTGTTCCACCCAACTGAAGAGGAATTCAATGATCCGCTGGAGTACATCAACAAAATCAGGAAGTACGCTGAAGGCTCCGGCATATGTAAAATCAAGCCACCGCCTAATTGGCAGCCGCCTTTCGCCGTAGACGTCGACAAGCTGAGATTTACGCCAAGAATTCAGCGTCTAAACGAATTGGAGGCAAAGACtcgtgtcaaattaaattttctggATCAAATAGCTAAGTTTTGGGAACTTCAAGGCTCCACATTGCGGATACCAATGGTTGAAAAAAGATgtattgatttgtacacattgCACAGTATTGTTCAAAGTCTGGgtggttttgaaCAAGTCACCAAAGATAGAAAATGGTCTAGAATCGCAAACAGCATGGGTTATCCACCCGGCAAAAGCACTATAGGGACTATTTTAAAAACACACTACGAACGGTTGATTTATCCGTTTGATCTATTTAAACAAggaaaaacattaaattttAAAATGTCGCCAATGAATGAGGAAAGTGAAAAGGCGGATAGAGATTATAAACCACATGGAATTGTAGGGCGGATGGCCATTAAACCACCACCTGAAAAACATGCTCGGCGGTCTAAGCGCTTTGAATCGGAACTAAAAGTCGAAGATGACATAAAAGAGGAATGCAAGGATGACAACAAGGAATTGAAACGACTTCAGTTTTATGGAGCTGGACCGAAAATGTCATTTAATAAGGATAAAGACGACGATAagcgaaatataaaaaatatcaattaTGATTTTGATCCTTTGGCGAAGTATGTTTGTCACAACTGCAACCGAGGCGATTCAGAAGAATATATGTTGTTGTGTGACGGTTGCGACGATAGTTATCACACATTCTGTTTGATGCCACCGCTGAGCGAAATACCCAAAGGTGATTGGAGATGTCCCAAATGCGTGGCCGAGGAGGTTTCAAAACCGATGGAAGCTTTTGGTTTCGAGCAAGCGCAGCGAGAATACACCTTACAGCAATTCGGTGATATGGCAGACCAGTTCAAATCTGAGTATTTCAACATGCCCGTGCACATGGTGCCGACTAGTACCGTCGAGAAAGAGTTTTGGCGTATTGTTTCGTCGATAGATGAGGACGTGACGGTAGAATACGGGGCTGATCTTCATACAATGGACCATGGCTCCGGCTTCCCTACAAAAACATCTCTAAATCTTCTACCCGGCGACAAAGAATACGCAGATTCCGGTTGGAATTTAAATAACTTGCCTGTTTTGGAGAATTCGGTCTTAGGATATATAAACGCGGATATTTCCGGAATGAAGGTTCCGTGGATGTATGTGGGAATGTGTTTTGCGACGTTCTGTTGGCACAATGAGGATCATTGGAGCTACTCAATTAATTATCTCCATTGGGGCGAACCCAAGACGTGGTATGGAGTTCCTGGTAAAATGGCTGAAGCGTTTGAAGATACAATGAAGTCTGCCGCTCCAGAATTGTTTCAATCGCAGCCGGATCTGTTGCACCAGCTGGTTACGATAATGAATCCAAATATTTTAATGAAAGCCGGAGTGCCAGTTTTTCGCACAGATCAGCACGCTGGGGAGTTTGTAATCACGTTTCCACGAGCGTACCATGCGGGTTTTAATCAGGGATACAATTTCGCTGAAGCTGTTAATTTTGCGCCAGCCGATTGGTTAAGGATGGGCCGTGAGTGCGTTTTGCACTACTCGAATCTGCGTCGATTTTGCGTTTTCTCACACGACGAATTGGTGTGTAAAATGGCTTTGGATCCTGATAAATTAGGTCTGACGATAGCTGCCGCAACATATCAAGATATGCTTCAGATGGTTGAAACCGAGAAAACTTTACGAAAGAATCTTCTGGACGTGGGAGTTTCAAACGCTGAGCGTGAAGCATTTGAATTGCTTCCAGACGACGAAAGACAGTGCGATACTTGTAAAACAACATGCTTCCTTTCTGCTGTAACATGTAAATGTACACCTGACATCCTCGTTTGTCTTCGACATTTCCAAAACTTATGCAATTGTCATCCAGAAAATTACACTCTACGTTATCGATATACACTCGACGAATTACCGGTGATGTTAAAAGCGTTGAAATTGAAAGCTGAGTCGTTCGATCACTGGGTGAATCGTGTAAAGGACGCTTTAGACACCAAAACTCCCAAAACATTGACGCTGCAAGAGCTGAAGGCGCTTCTAAATGAAGCTGACGGCAAGAAATTTCCCAAATGCGACTTGCTTCAAACATTAACTGACGCAGTGGAAGATGCAGAAAAATGTGCTAGGGTCATTCAGCAACTCGATCTCAACAAAATGCGTACGAGAACCAGAAATTCGTCCGATACAAAGTACAAATTAACGTTAAAAGAATTGATTCTTTTCCATGAAGAGTTAGATAGTTTAGTGTGCGTTTTGGAAGAGGCCAAGAGCATTAAAGAGTTACTCGAAGAAACAAAGAAATTCGAGAGTTCCAGTAAAACTCTATTGGAGATGAAACTGAGCGAATGTTCTCTCTCCGATTTGGAGACCTGCATCAATCAAGGAAACAATCTGTGTATAGAACTTCCAAATTTACGTACTGTGAAGATGAGATTGCGTCAGTGTGTCTGGTTGAACGATGTTTTGTCATATAAGAAAAAGACTGAGGTTCTGGGACTGgaatcaattaaaaacattattaAATCAGGCAGTCAACTTCCTCCAAATTCCGAAATTGAGAATGAACTCGGCGAGCTGCAAGTTTTGCTCTCAACTAGCGAAGAATGGGAGAATAAGGCGCAGGAGGTTATCAAAGATACGAGCGGCGACGTATTGATCGAAGTTGATAGGCTTTTGAAAGAATCTGGCCAAATCAATGCATACCTTCCTTCAGAAGAATTTTTGTTTGAAGCTATGGACAACGCCAGAGATTGGTTGAGGCAGTTGGAAGAAATGAATTCTGCCGAATGTTACCCATATTTCAACGACATGGAAGATTTGATTAAGAAAGGTCGTCAGTTAGCGCTTCACCTTGTTGAAGTCAATAAATTGGAATCGTATCTTGAAACAGCGAATGCGTGGAAAGAAAAAACCAGCAAATCGTTTCTGAAACGAAACACGCCTAACAGCTTAATGGAAGCATTATCTCCGAGAATACATAACTCCAAATTGCGTAAGAAAACTCCAGACGAGGAACATGGAATTTTCAATTTAACTAGCGACATGGATCCTGCTACCGTCGTCTCCTTGTTCAAAGAAGCCGAACAAAAAGAAATGGAGCTAATAAAAAGCTTACGAACATCTAATTTGGAGAAGAGTTTGGATCCAAAAGACGGGGCCTTGTTTTGTGTCTGTCAACGCAACCTTTTTGGCGTTATGATGCAATGCGAACTGTGCAAGGATTGGTTTCATGCAAACTGCGTTATGCTTCCGAAAGTCGCGTCTTCAAAGTACAGAGGAAACTTTACGAGCGTAGCTCTTCATTTGGGATTCAAAGATTGTAAGTTTTTGTGTCCAAACTGTTACAGGACTAAGCGTCCACGCCTCGACGCCATTCTCCTGCTGCTGATGTCCCTGCAGAAGCTATACGTAAGAGTCCCAGAAGGTGAAGCGTTGCAAAGTTTGACCGAAAGGGCGATGAATTGGCAGGACAGGGCCAGGCAGTTGATTTCCAATTCAGAACTAGAAGCAGCCAAAAATAAATTGACTTCGTTCACCCAAAAGTATTCGGAAGCGGCAGCGAGACAACGAACTGAAAAAATCATATCTAGCGAATTGAAAAGAGCTTATAAAAATCCCGAGTTGCTGCAACGGGTACAGGAGATCGCGCCGTTTAGTGGTGTAAATCAAGACGACAAGCCCGACGAGAATCCTCATGATTCTTCAGACGATTCCAAAGACGATCGAATGGGAGAACACGCTTATTCTCTTAATTTTCCCAAGTTTGACTGTAGCGAGTACAGGTTGCAGTTATCTGCCGAAATTAGAACCCAGTTGGAAGAACTTCTCATGGAGGGCGATCTATTAGAAGTGTGTCTGGACGAGACCTTCCAGCTGTGGAAATTACTGCAAGCTTCCAGAGATCCCGAAAAGGAGTCAATTTTAATCGATTTTGACGCGCACACGAAGATCGGCTCTACAAAGCGAGGACGTAAGCGACGTTCCGACGAAGTCGACTTCAAAAAAATCAAATCCGTGAAGAACGAGGTCGACAACAAGAAATCCAAGGCACAAAAAACCAAAGAAAACACTGGAAAGAAGGATAGGACGCGGCGCAAAGGACGTCGCCGCCAATCTACAGGATCTGAAGACGAAGACGAGGACATTTGTGCGGCGACTGGGTGTTTGAGACCGTCGGGGGATAATGTCGACTGGGTGCAGTGCGATGGAGGGTGTGATAAGTGGTTTCACATGGCTTGCGTTGGTTTATCCGCGCAAGATATATGCGAGGACGAGGATTACATCTGCATTACCTGCTCACAAAACAATTACGGGACTCTAAATAACATGGACAGTATGTGCGCGGTCAATTCAGATTGCACAACCGTAATCCAGCCTTCCACGTCTAAAGACACTGTtcagtgcaaaatttag
Protein Sequence
MSTKVDKALGNPVKAHPPSKMHPKLDSGYGFKEATFEFEPPPEAPVFHPTEEEFNDPLEYINKIRKYAEGSGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSTLRIPMVEKRCIDLYTLHSIVQSLGGFEQVTKDRKWSRIANSMGYPPGKSTIGTILKTHYERLIYPFDLFKQGKTLNFKMSPMNEESEKADRDYKPHGIVGRMAIKPPPEKHARRSKRFESELKVEDDIKEECKDDNKELKRLQFYGAGPKMSFNKDKDDDKRNIKNINYDFDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGDMADQFKSEYFNMPVHMVPTSTVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLLPGDKEYADSGWNLNNLPVLENSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGKMAEAFEDTMKSAAPELFQSQPDLLHQLVTIMNPNILMKAGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSNLRRFCVFSHDELVCKMALDPDKLGLTIAAATYQDMLQMVETEKTLRKNLLDVGVSNAEREAFELLPDDERQCDTCKTTCFLSAVTCKCTPDILVCLRHFQNLCNCHPENYTLRYRYTLDELPVMLKALKLKAESFDHWVNRVKDALDTKTPKTLTLQELKALLNEADGKKFPKCDLLQTLTDAVEDAEKCARVIQQLDLNKMRTRTRNSSDTKYKLTLKELILFHEELDSLVCVLEEAKSIKELLEETKKFESSSKTLLEMKLSECSLSDLETCINQGNNLCIELPNLRTVKMRLRQCVWLNDVLSYKKKTEVLGLESIKNIIKSGSQLPPNSEIENELGELQVLLSTSEEWENKAQEVIKDTSGDVLIEVDRLLKESGQINAYLPSEEFLFEAMDNARDWLRQLEEMNSAECYPYFNDMEDLIKKGRQLALHLVEVNKLESYLETANAWKEKTSKSFLKRNTPNSLMEALSPRIHNSKLRKKTPDEEHGIFNLTSDMDPATVVSLFKEAEQKEMELIKSLRTSNLEKSLDPKDGALFCVCQRNLFGVMMQCELCKDWFHANCVMLPKVASSKYRGNFTSVALHLGFKDCKFLCPNCYRTKRPRLDAILLLLMSLQKLYVRVPEGEALQSLTERAMNWQDRARQLISNSELEAAKNKLTSFTQKYSEAAARQRTEKIISSELKRAYKNPELLQRVQEIAPFSGVNQDDKPDENPHDSSDDSKDDRMGEHAYSLNFPKFDCSEYRLQLSAEIRTQLEELLMEGDLLEVCLDETFQLWKLLQASRDPEKESILIDFDAHTKIGSTKRGRKRRSDEVDFKKIKSVKNEVDNKKSKAQKTKENTGKKDRTRRKGRRRQSTGSEDEDEDICAATGCLRPSGDNVDWVQCDGGCDKWFHMACVGLSAQDICEDEDYICITCSQNNYGTLNNMDSMCAVNSDCTTVIQPSTSKDTVQCKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480636;
90% Identity
-
80% Identity
-