Basic Information

Gene Symbol
ZNF784
Assembly
GCA_947095575.1
Location
OX352714.1:2842210-2855342[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.13 6.3 7.6 1.1 1 23 369 391 369 391 0.97
2 11 0.03 1.5 9.6 0.3 1 23 398 421 398 421 0.94
3 11 6.5 3.3e+02 2.2 0.3 1 23 425 447 425 447 0.84
4 11 0.081 4.1 8.2 2.4 1 23 452 475 452 475 0.97
5 11 0.0025 0.13 13.0 0.2 2 23 480 502 479 502 0.96
6 11 6.4 3.2e+02 2.2 0.1 2 21 515 534 515 535 0.86
7 11 0.19 9.5 7.0 0.2 2 23 590 612 589 612 0.96
8 11 0.019 0.95 10.2 0.1 3 20 629 646 628 649 0.92
9 11 1.6e-05 0.00078 19.9 0.7 1 23 655 677 655 677 0.97
10 11 0.00022 0.011 16.3 2.4 1 23 684 706 684 706 0.97
11 11 0.0026 0.13 12.9 2.5 1 23 712 735 712 735 0.89

Sequence Information

Coding Sequence
ATGCGTTGCTGCGTTCTCAACTGCAGCAATGATACAAAAAAAACCAATAAAGACCATGGCATCACGTTCCATTTGTTTCCAAAGGACCCCATTTTGAAATCAGCATGGATGGAAGCTATTTGCAATCCAGAATGGGCTCTTAAAGAGAGAAGCACTATTTGCTCTGAACATTTTCGGAATGAAGACTTCTACCAGACAAAGACAGGCATGAGAAAAATCAGAGATGGGGCAGTGCCTGTTATAATTGATGATTCCACTGAGGATCTGGAAGCGCCAGCCACATTCAGGGTTTGCAGGATATGCCTCGCGATGGACACCAGGCTATTTGACATCCGCGAGCACAGGCTTGATCAGTTTTATCTACAAATCACTGGGATTTTCGTAAATGATGAGGACAGGCTGCCTCAGCGCGTGTGCTGGGAATGCTCGCACCGCCTTCGGTCCGCGGCCGCGTTTCGGGGTAAATCGTTACGAGCACACTCACTTCTTCTAGACTCATTGCAAGCTGACAAACATATAACAATTAGAGATATCAAATCTATCAATCGGACAACCGAAAAACTAACCACTAACTTAGAAAAAAAGATATTATATGTTTGCAACAACTCTGATATAGAAATCCGTGACGATGAAGTAATTAAATCAGAAATACACACTGAATACAATGAAAACGGTGATGATTATAATGATGATGATTTTGATTATAAGAGTGAGGAAGTAAAAGAATTACCCGAAGTTGAAATCAAAGATGAAAGTAATGAGATATTTGTGAATGAGTTCAACGATTTTGAGTCTGACGATGAAAAGACACTCAGTGTGCTGTCCAGTCAAGTGTTAGAGCCGAAGAAGGTTAAAGTTAAAAAGAAAAAGGTTAAAGTTAAGAAAGTGAAAGTTAAAGTTAAGAAAAGTGAACCTGTTAAAAGAAAGGATGAAGATGAAAACCCTGAGACTACTATGGATAAGTACAAAACGTCAGATATCAAACGTCGCAAGCCGAATGATGGGTTGGACGAGTCTCTCTTCACAATCACCACTTTAACCTACGAGGAGCAAATTGCAGAGGTGGAGAAACGTCAGGATTCCAATGCGTATAAAAACGCATTGTTTAAATGTACCACGTGTTACCGCGGCTTTCAGATCAGAGACAGATTCGAGGCGCATATTGTAAGGCATAGCGAGAAATGCGGTATGTACGAGTGTTTTATTTGCAAGACGCGACTTAAAGCTGCGCGGGCGCTTCGGAAACATATCACGGCTCAGCATACGGAGCAGTTCAGCTGTAAAGGATGTCCCTTTCTTACGAGAAACAGGGGCGTGGCTAGAGAGCACGAGAAATGGCATGCAGGGACCAAGTATCATTGTCCGCACTGTGCTATGGAGTTTGATAAGCTTACAACATACATGGGTCACATCCGCATAAAGCACGCTTCAGACTGGGTGTGCGCGCTGTGTGGATATACATTCGTGAGTCGCAAAGGCGTTGAAGTGCACAAACGGAAGAAACATCGCCTTAACGATGACAATACTCCGCTAGACGGACCCACGTGTACCGTTTGCGAGGTACAGTTCGCGACAGAAGAGGCGCATGCGCGGCACCTTAAGCTTTCATCGCGTCACATGACCGAGAGTGACCCTAATCGCCTTCGAAACGACTCGCAGAGTATGAATGCAGAGCGCAACGGTCGTGTGATGCGTCGCATTGAGCGGCGGCCGGTCATTCACCCGCGTCTGCCCGGCGAGGTGGCGCCCGACGCCCCGCGACCCGTCACATGTGAGCAGTGTGGCGTACAACTGCGCGACTTGCGTCTATACGCGCAACACTTCCGACGCGCGCATCCCGACAAGAACCGAACCAAGTACCCCGCCATGAAGACACCGGCCATGTGCGAACTATGCGGGCGGATCTTCCAGAGTATGGCACTCCTGAAGGACCACATGTGGGTGCACACGGGAGAGAAACGCTTCAAATGCGCCGGCTGTCCGAAGAGCTTCACTCAGAAGAGCAACCTTGTGTTCCACGAGCGCGTGCACAGCGAGGCACGCCCCTCGTTCCCGTGCCCGCTGTGCGGGAAGCACTTCGCGTTCTATAACAACAGACGCCGACATATGTTTATACACACGGGACTAAAGCCCTTCAAGTGTGGCTCGTGTGGAAAGTGCTTTACTACAGCGGGAGAGCAACGCGCGCACTCAGAGCACGTGCACATGAAGAAGCCATGGCCGAAGCGAGCGCGCAAGGAACTCTATCCCGACAAGTGCACTGAACCCTGA
Protein Sequence
MRCCVLNCSNDTKKTNKDHGITFHLFPKDPILKSAWMEAICNPEWALKERSTICSEHFRNEDFYQTKTGMRKIRDGAVPVIIDDSTEDLEAPATFRVCRICLAMDTRLFDIREHRLDQFYLQITGIFVNDEDRLPQRVCWECSHRLRSAAAFRGKSLRAHSLLLDSLQADKHITIRDIKSINRTTEKLTTNLEKKILYVCNNSDIEIRDDEVIKSEIHTEYNENGDDYNDDDFDYKSEEVKELPEVEIKDESNEIFVNEFNDFESDDEKTLSVLSSQVLEPKKVKVKKKKVKVKKVKVKVKKSEPVKRKDEDENPETTMDKYKTSDIKRRKPNDGLDESLFTITTLTYEEQIAEVEKRQDSNAYKNALFKCTTCYRGFQIRDRFEAHIVRHSEKCGMYECFICKTRLKAARALRKHITAQHTEQFSCKGCPFLTRNRGVAREHEKWHAGTKYHCPHCAMEFDKLTTYMGHIRIKHASDWVCALCGYTFVSRKGVEVHKRKKHRLNDDNTPLDGPTCTVCEVQFATEEAHARHLKLSSRHMTESDPNRLRNDSQSMNAERNGRVMRRIERRPVIHPRLPGEVAPDAPRPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPAMCELCGRIFQSMALLKDHMWVHTGEKRFKCAGCPKSFTQKSNLVFHERVHSEARPSFPCPLCGKHFAFYNNRRRHMFIHTGLKPFKCGSCGKCFTTAGEQRAHSEHVHMKKPWPKRARKELYPDKCTEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00663529;
90% Identity
iTF_01429407;
80% Identity
iTF_00638706;