Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352727.1:2007011-2015812[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0047 0.24 12.1 2.3 3 23 248 269 235 269 0.95

2 10 0.62 31 5.4 0.1 3 23 292 313 290 313 0.94

3 10 0.00067 0.034 14.7 0.7 2 23 336 357 335 357 0.97

4 10 0.0048 0.24 12.0 1.0 1 23 361 383 361 383 0.97

5 10 0.0017 0.083 13.5 0.2 1 23 388 411 388 411 0.96

6 10 8.8 4.4e+02 1.8 0.4 2 20 418 436 417 440 0.77

7 10 3.5e-06 0.00017 21.9 0.5 2 23 448 470 447 470 0.96

8 10 0.00028 0.014 16.0 0.8 1 23 476 498 476 498 0.93

9 10 3.3e-07 1.7e-05 25.2 1.4 1 23 504 526 504 526 0.99

10 10 1.3e-05 0.00064 20.2 3.6 1 23 532 555 532 555 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0047	0.24	12.1	2.3	3	23	248	269	235	269	0.95
2	10	0.62	31	5.4	0.1	3	23	292	313	290	313	0.94
3	10	0.00067	0.034	14.7	0.7	2	23	336	357	335	357	0.97
4	10	0.0048	0.24	12.0	1.0	1	23	361	383	361	383	0.97
5	10	0.0017	0.083	13.5	0.2	1	23	388	411	388	411	0.96
6	10	8.8	4.4e+02	1.8	0.4	2	20	418	436	417	440	0.77
7	10	3.5e-06	0.00017	21.9	0.5	2	23	448	470	447	470	0.96
8	10	0.00028	0.014	16.0	0.8	1	23	476	498	476	498	0.93
9	10	3.3e-07	1.7e-05	25.2	1.4	1	23	504	526	504	526	0.99
10	10	1.3e-05	0.00064	20.2	3.6	1	23	532	555	532	555	0.98

Sequence Information

Coding Sequence: ATGAGTGTGGCTAAGAAAAAGGGTCCTGTGTTTGACCCCGGCCTATGCAGATGCTGCGGCACCATGAAGAAGTGTCGGTTACTAAATGTCGAGTATGAAAGCTCCGGTCAGAAGGAAGTATATTCAGATATGATTCTGGACTGCTTTGGACTTATACTTTCGCACTTGGAAGGCAAGCCGACTGAGCGGCTGGTCTGTGCCACTTGTGTGATGAGGCTGAGAGATGCATTCACCTTCAGGAAGCAGGTGGTGCAGTGTGAGGAAGCCTTTATACAGATGAAGATGTATGATAATATTGACAACAGTAGCCTAGATAGAAAGCTCCCTCTAGAACCTTCCATGGTAGAAGTTCGTTCGTTCGAGATGGAAGTGAAGATGGAGCCTGTGGATGAGGACAATGCCAGTGACGAAGACACGGCAGCCGACGATCACGTTATACCAAAAGAATACAAGGTTCCAGTAAATGATAGCTCAAACTCCAATGATGACCTTCCGCTTCGCTGCATAGCATCCAGGCGTCTGGTGAAGAACGAGAGGAAGTCTCCGAGCAGGCTAGCTATCAGCAAACACCGCTGGTGGACCAAATCTCAGCCTCCCACTGCTAAACCCAAGTTGCCAATATCAAAAGTGCAAGAATTGATTCGTCAAAAAGATACCTCATATTTGGTAGACACGAACATTTTAGCAatcgttgaaaattcctacatctgtccgttcaaatgcagacacaacaacctcttatgttactactgtggtgtacatttcactgatccggttctcttaagagaccatactatatctcaacaccaaactaagaagtttaaagtcaacgaccacaagaatatggtcaagtttgacttgacaaggattgattgtcgactctgtcaagcaaagattgatgatttggatacttttaagaggcatatagtgacagttcatgggaagaagtattattttgacacgaaggattcagtgttgccgtttaaattgattaaagatgatatgcgttgcgcgatatgtaatatggggtttccatattttcacgcattgaataaacatatgaacgaacatttcagtaactatatatgtgagacttgtggATTAGGTTTCGTGGACAGCCATAGGTTCGTGATGCATCAGACGAGGCATGAAGAAGGAACTTACCCTTGCGAAACGTGCGGAAAACTCTTCAAGTCGGTTTACAACAGAGAACTTCATATAGACAGGGTACACAAGAAGCGTGGACGGGTTTACTGCCCGAAGTGCGACGTTAAGCTAATGTCTCACCCTCAGAAGCTGAAGCATCTGGTGGAAGTTCACGGAGAACAGCCCACCAGTCTACCGTGCACCTACTGTGAGAAGgtTTTCGACACGCGTCGCAATTTAACAATACATTGGCGAAAGGAACATTTAAAAGATTTCAGatACGATtgtcaagtgtgtggtcaaaagttcttcactcgcttcgctctaaacaatcacatgccgactcacaccggtgaacgaaacttcaaatgtaaagtttgcgataaaagctatccacgcctgaagacgctgaaggaacatatgaggatacacaccaacgatcggagatACAGATGCCACATAtgtgggcaggcgtttattcaaaactgcagcttgaaagggcacatgaaaagtcaacatcctgagtatggataA
Protein Sequence: MSVAKKKGPVFDPGLCRCCGTMKKCRLLNVEYESSGQKEVYSDMILDCFGLILSHLEGKPTERLVCATCVMRLRDAFTFRKQVVQCEEAFIQMKMYDNIDNSSLDRKLPLEPSMVEVRSFEMEVKMEPVDEDNASDEDTAADDHVIPKEYKVPVNDSSNSNDDLPLRCIASRRLVKNERKSPSRLAISKHRWWTKSQPPTAKPKLPISKVQELIRQKDTSYLVDTNILAIVENSYICPFKCRHNNLLCYYCGVHFTDPVLLRDHTISQHQTKKFKVNDHKNMVKFDLTRIDCRLCQAKIDDLDTFKRHIVTVHGKKYYFDTKDSVLPFKLIKDDMRCAICNMGFPYFHALNKHMNEHFSNYICETCGLGFVDSHRFVMHQTRHEEGTYPCETCGKLFKSVYNRELHIDRVHKKRGRVYCPKCDVKLMSHPQKLKHLVEVHGEQPTSLPCTYCEKVFDTRRNLTIHWRKEHLKDFRYDCQVCGQKFFTRFALNNHMPTHTGERNFKCKVCDKSYPRLKTLKEHMRIHTNDRRYRCHICGQAFIQNCSLKGHMKSQHPEYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00119875;
90% Identity: iTF_01220039; iTF_01429299;
80% Identity: -