Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352727.1:1967567-1969851[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.5 77 4.2 0.3 2 23 80 102 79 102 0.92

2 17 0.0075 0.38 11.5 0.4 3 23 130 150 128 150 0.95

3 17 0.053 2.7 8.8 0.4 2 23 155 177 155 177 0.93

4 17 8.3 4.2e+02 1.9 0.9 1 22 181 202 181 202 0.90

5 17 0.055 2.8 8.7 1.9 1 23 209 232 205 232 0.90

6 17 2.8e-06 0.00014 22.2 2.2 1 23 239 262 239 262 0.98

7 17 0.0025 0.13 13.0 4.1 1 23 267 289 267 289 0.97

8 17 1.3e-06 6.3e-05 23.3 0.8 1 23 295 317 295 317 0.99

9 17 1.3 64 4.4 0.3 2 23 366 388 365 388 0.87

10 17 0.13 6.6 7.5 0.7 3 23 466 486 464 486 0.95

11 17 0.00012 0.006 17.1 1.7 1 23 490 513 490 513 0.97

12 17 1.5 75 4.2 2.1 1 22 517 538 517 538 0.94

13 17 0.017 0.86 10.3 0.3 3 23 547 568 546 568 0.92

14 17 9.2e-06 0.00046 20.6 0.7 1 23 575 598 575 598 0.98

15 17 4.6e-06 0.00023 21.5 0.4 2 23 604 625 603 625 0.96

16 17 8.7e-05 0.0044 17.5 0.5 1 23 631 653 631 653 0.93

17 17 3.7e-05 0.0018 18.7 2.2 1 23 659 682 659 682 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.5	77	4.2	0.3	2	23	80	102	79	102	0.92
2	17	0.0075	0.38	11.5	0.4	3	23	130	150	128	150	0.95
3	17	0.053	2.7	8.8	0.4	2	23	155	177	155	177	0.93
4	17	8.3	4.2e+02	1.9	0.9	1	22	181	202	181	202	0.90
5	17	0.055	2.8	8.7	1.9	1	23	209	232	205	232	0.90
6	17	2.8e-06	0.00014	22.2	2.2	1	23	239	262	239	262	0.98
7	17	0.0025	0.13	13.0	4.1	1	23	267	289	267	289	0.97
8	17	1.3e-06	6.3e-05	23.3	0.8	1	23	295	317	295	317	0.99
9	17	1.3	64	4.4	0.3	2	23	366	388	365	388	0.87
10	17	0.13	6.6	7.5	0.7	3	23	466	486	464	486	0.95
11	17	0.00012	0.006	17.1	1.7	1	23	490	513	490	513	0.97
12	17	1.5	75	4.2	2.1	1	22	517	538	517	538	0.94
13	17	0.017	0.86	10.3	0.3	3	23	547	568	546	568	0.92
14	17	9.2e-06	0.00046	20.6	0.7	1	23	575	598	575	598	0.98
15	17	4.6e-06	0.00023	21.5	0.4	2	23	604	625	603	625	0.96
16	17	8.7e-05	0.0044	17.5	0.5	1	23	631	653	631	653	0.93
17	17	3.7e-05	0.0018	18.7	2.2	1	23	659	682	659	682	0.97

Sequence Information

Coding Sequence: ATGGCGAATCGCAACGCTGAAATTGTGTTACAGTATTCCACGCTGTATCCATTCAGGTTGCGCGGCAAATCCTTGATGTGTGTGTACTGCTGCGAGGAAATCGAAGACCCGGACGAATACAGACGTCATGTGGATAAAATGCACAAGACTGTAGATGTTTTCACAGCTTTTGCGCACGTTAAATGTAGGAATAGACTGAGCGTGAAAGACTTCCTGAAGGTCGATTGCATTAACTTGAAATGCAGATTGTGTGATGAACCTTGCGATACAGTCGCGCTTGTGGCCCAGCATCTAAAAGACCAGCATGATAATATCGCTATTAAAAACATGGACTTAAACTATGAAGTGAATCTACATCCGTTTCGGTTAATCAAAGACAAATGGATATGTATGGTGTGCAACACCAAACTGCCAACCTTGACTAAGCTTACAAGACACATGTCTTCTCATTTTGCGGATAACGTTTGCGACGTGTGCGACAAAAGCTACTTGACAGTTCAAAGTTTAAAGTATCACATTAAGTTTAACCATTCAAAGGATCACATCTGTAGAAAGTGTATGATGGAGTTTTCCACAGCAGAAGAGAGAAAAGAACACTTTAAAACATCATCCAAATGCTGGGGCTTCGTTTGTATTTATTGCAAGGAAAGATTCTCTTCTTGGGAATATAAGCAGAAGCATTTAGCTAATAAACATAACGTTAAAGCTTCGACGTACACTTGTTCAGATTGTGGAACCGTTTTTAAATCGAGTTCAAACTTCTACTATCATTACAACACGTTGCATACGGACTTGCCTCATATGTGTTCATACTGTGGTATGCGCTATGGAAAAAAATGTCAGCTTGCTAATCATATAAGCACACATAGCGATGATAAACGATTCCAGTGCAACGTTTGTTCAAAGGCATTTGCTACTAAAAAGGGGTGGAGAGATCATATGCGGACGCACCTTAAATCAAAAAGATTTGTCAGTTTACAATCAGATCAAAAACTATCATCAGACAAACAGCGGCGTGATGTGGCAAAACGAAACGCCGAAGTTGTGGTACAGTATTCGACACTGGTTCCGTTCAGAACAAAAGGAAAACACTTAATGTGCGTTTACTGCGGCTACAGAATCGAAGATCCTGACGAGTTTAGATGCCACATGGATGATATGCACAAAACTGTAGATATTCACACAGTTTTTTCTCACACTCAGAGCAGAGATTCATACCGTGTGAAGGTTGACTGCCTTAATTTAAAGTGCAGATTATGTTTGGAACCTTTTCATACAGTAGCGGAAGTAGCTCAACATCTTGTTAATCAACATGACAACCAAGAAATCAAAGATATGGACTTAAACTATGAAGTGGCTTTGTATCCGTACCGGTTAGTTAAAGATGAATTGTTCTGTCTTTTGTGCAATATCAAACTGCCGACCTTCATTAAACTCACAAGGCACATGTCCTCTCATTACTTGGAATACGCTTGTAATGCCTGCGATAAAAGCTACTCGAACCATAGAAGCTTGAGCATGCACATGAAGGTCAGTCATTCTGATAATCACATCTGTAGAAAGTGTATGTTGTCCTTTTCCACCCTAGAAAAAAAGAAAGAGCACATGAAAACATCCACGCAATGTTGGAGTAACATGTGCACTCGTTGTGGGGAACGATTCGTTTCTTGGGATAAGAAACAGGAGCATTTAGTCAGCATACACAATGTCCAACCTTTGACTTATCCGTGTCCAGATTGTGGCGTCGTGTTTAAGTCTAGGACTAACTTTTACTATCATTACAATACGATGCACTCTGAATTGGCACTCATGTGCTCGTACTGTGGCAAAAAGTTTAAAAATGAGAGCTATCTCGCTGATCACTTGGTCACACACACTAGTGAAAAGGAGTTTCAGTGCAATGTTTGCTCGAAGGCGTTCTCTAGAATGAGAGGCTTGCAAGATCATATGTGGACGCACAGCAAAACGAAGAGATACCCTTGCAGTGCTTGTGATGTGTCGTTTTGTCAGAGAAAAAACTTAACTTCTCACATGTCAACTACACACCCAGATATTTTGAATAAGAATATATAA
Protein Sequence: MANRNAEIVLQYSTLYPFRLRGKSLMCVYCCEEIEDPDEYRRHVDKMHKTVDVFTAFAHVKCRNRLSVKDFLKVDCINLKCRLCDEPCDTVALVAQHLKDQHDNIAIKNMDLNYEVNLHPFRLIKDKWICMVCNTKLPTLTKLTRHMSSHFADNVCDVCDKSYLTVQSLKYHIKFNHSKDHICRKCMMEFSTAEERKEHFKTSSKCWGFVCIYCKERFSSWEYKQKHLANKHNVKASTYTCSDCGTVFKSSSNFYYHYNTLHTDLPHMCSYCGMRYGKKCQLANHISTHSDDKRFQCNVCSKAFATKKGWRDHMRTHLKSKRFVSLQSDQKLSSDKQRRDVAKRNAEVVVQYSTLVPFRTKGKHLMCVYCGYRIEDPDEFRCHMDDMHKTVDIHTVFSHTQSRDSYRVKVDCLNLKCRLCLEPFHTVAEVAQHLVNQHDNQEIKDMDLNYEVALYPYRLVKDELFCLLCNIKLPTFIKLTRHMSSHYLEYACNACDKSYSNHRSLSMHMKVSHSDNHICRKCMLSFSTLEKKKEHMKTSTQCWSNMCTRCGERFVSWDKKQEHLVSIHNVQPLTYPCPDCGVVFKSRTNFYYHYNTMHSELALMCSYCGKKFKNESYLADHLVTHTSEKEFQCNVCSKAFSRMRGLQDHMWTHSKTKRYPCSACDVSFCQRKNLTSHMSTTHPDILNKNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -