Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352715.1:1482144-1492107[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0052 0.26 11.9 1.2 1 23 303 325 303 325 0.96

2 12 0.00034 0.017 15.7 0.4 2 23 333 354 332 354 0.94

3 12 0.028 1.4 9.7 0.8 1 23 358 380 358 380 0.97

4 12 0.00048 0.024 15.2 0.5 1 23 385 408 385 408 0.98

5 12 0.00062 0.031 14.9 0.3 1 23 412 435 412 435 0.94

6 12 0.01 0.52 11.0 0.2 2 21 453 472 453 477 0.92

7 12 0.0001 0.005 17.3 0.9 3 23 487 508 487 508 0.98

8 12 0.08 4 8.2 0.6 2 23 528 550 528 550 0.97

9 12 6.3e-06 0.00032 21.1 0.5 1 23 561 583 561 583 0.99

10 12 1.8e-07 8.8e-06 26.0 1.4 1 23 589 611 589 611 0.99

11 12 0.0016 0.078 13.6 1.8 1 23 617 639 617 639 0.98

12 12 6.2e-05 0.0031 18.0 0.2 1 23 645 668 645 668 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0052	0.26	11.9	1.2	1	23	303	325	303	325	0.96
2	12	0.00034	0.017	15.7	0.4	2	23	333	354	332	354	0.94
3	12	0.028	1.4	9.7	0.8	1	23	358	380	358	380	0.97
4	12	0.00048	0.024	15.2	0.5	1	23	385	408	385	408	0.98
5	12	0.00062	0.031	14.9	0.3	1	23	412	435	412	435	0.94
6	12	0.01	0.52	11.0	0.2	2	21	453	472	453	477	0.92
7	12	0.0001	0.005	17.3	0.9	3	23	487	508	487	508	0.98
8	12	0.08	4	8.2	0.6	2	23	528	550	528	550	0.97
9	12	6.3e-06	0.00032	21.1	0.5	1	23	561	583	561	583	0.99
10	12	1.8e-07	8.8e-06	26.0	1.4	1	23	589	611	589	611	0.99
11	12	0.0016	0.078	13.6	1.8	1	23	617	639	617	639	0.98
12	12	6.2e-05	0.0031	18.0	0.2	1	23	645	668	645	668	0.98

Sequence Information

Coding Sequence: ATGAATAATTTCTCTGAGGAGAATGAGCATGTTAGGGTTTGTCGGGTGTGCCTTAATAGGAATGTGAAAATGTATGACCTACAAAGTTACCCCCTGGAAACATACTTTGAAGCTATTATTGGGTACACTGTAATGACCTCAATGGATCTACCTCCGTACCTTTGCTTTGAATGTGCAACCTTGGTTAAGAAGTTTTCATTCTTCAGAGAGCGCTGTTTGACTGGACAGGCTACTTTGTATGGCATTCTTCAGAGCTCTGGAAAGGTCACAGAAAAGGAGCTTAACAAAATTGACAGGCAGTCGTCAGGGCTCACGTCAAAACTGTCTATACAGAGTTCCGAGAACAATGTATTTTATGCAGAAGAGGGCTCCGTAATGCAGATGGTGAAAGAGGAGCCGGAACCAACTACTGATGATTTCATGCTCGCCGATTATTGTCCGGTACAGTTCAAGCAGGAAGAAGATTTACAAATGCCGGATTTTGGATGTTCCAGTGATGATGAAACATTGTCAGTTCTTAAAGTGGTGAAGGAGAAAAAGAAAAGAGGAAGAAAGAAAAAGGTTGTTGTTGAAGTGCAATCTGAGGAATTAAAGAATGAATTAGACATTTCAAAATTTGTAGATCAAGGATTGCAACTACAAGAAATAATTGAGAAACCATCAGAGATAATAGAAGACATGGGCATTGAGATAGAACCAGAAGCACCCAAACGCAACAAGAGAGGTCGCCCCAGGAAAAATGTCGAGAAAGCAGTTTCCAAGTCTCGACGGACAAAGAACACAGGCGGAGTTCACGTAGAAGATATCGACTTAGATGAATACGTGTCTGTTGTCAAACTAACGTTAGAAGAACAAATGGACGAAATAACCAAACGCAAGGACTCACTCAACTACCAGAACGCAGCTTTTCAATGCAACTTTTGCTACAAGGGATTCATAGACGCCAACGCGTGGAAGCATCACGTTGGAAAACACGATCCAAGCGCAGGTAACATAGAGTGTCCGGTCTGCAAGTTTCGGTTTCCAACAAAACGTGCTCTTCAGAAGCATGCCACGAATCACGAGAAGAAATACGCTTGCAAGTCCTGCCCTTACGTCTCTAAAACTACAACACAAGCGAAACAGCATCAAAGATGGCATAAAGGAGTTACATATACTTGCGAGTATTGTGATGAAGTTTCCACAAAATGGACATCTTACCTTTCCCACGTGCGCATCAAACATCCATCTTCATTCATCTGCTCCGTCTGTGGCTACTCTTTCGTCAGCCAACTTGGTCTCACCATGCACAAAACTATGATGCATAAGGATGTACATGAAACGGAAAAGGCTGATACTAGTGAAGAATCAGGCCCGTACTGTCAAGAATGCGATGTCAAGTTTGTTTCAATGGAGGCGTATAACCGACACATGGTTACTTCGGTCAAACATTCACAAAGTGACGATTTTAGTAAAGGCTGTAGAGTTTGTGGTGCCACCTTCTCAAACCCTGAGGAGTTACGCTTGCATCACAGAAAGGAGCACGCCAGGAAAAGACCCAAGAACTACGGCAAGAAACCAGCTGGGCATTCCTGGCCAGCCAAGTGTGAACATTGTTCAGAGGTGATTCCTAACGCACGGGAATATTGGACCCACTTCAGGCGTGTACACCCTGATAAAAACTACCCCATACAGAAAGACTACGTGTGTGATGTCTGTGGAAAGAGTTTTAGGGGTAACGCGTTCCTTATATACCACAAGCGGACGCACAGCGCCGAGCGACAGTACAAGTGTGAAGAGTGCGGCAAGTCCTTCTACAACCGCACCAACCTCAGTATGCATGCGCGGACGCACTCCAACTCTCGCCCCTACCCCTGTGACGTGTGTCGGAAGGCGTTCAAGTGTAAAGGTGCTTTGGACAGGCATTATCGGAGCCACACAGGAGTGAAGCCTTATGTGTGTGAAGTGTGCGGCAAAGCCTTCGGACAGTCCAACAGTCGCAAACTTCACGTCCGTACTGTACATCTGAAGCAACCTACGCCTTACGTCAGTCGGAACCGGATAGATCGACGGAACGAGCAGAAAGGAGATACGCTTATATTTGTATATCCTAACTAG
Protein Sequence: MNNFSEENEHVRVCRVCLNRNVKMYDLQSYPLETYFEAIIGYTVMTSMDLPPYLCFECATLVKKFSFFRERCLTGQATLYGILQSSGKVTEKELNKIDRQSSGLTSKLSIQSSENNVFYAEEGSVMQMVKEEPEPTTDDFMLADYCPVQFKQEEDLQMPDFGCSSDDETLSVLKVVKEKKKRGRKKKVVVEVQSEELKNELDISKFVDQGLQLQEIIEKPSEIIEDMGIEIEPEAPKRNKRGRPRKNVEKAVSKSRRTKNTGGVHVEDIDLDEYVSVVKLTLEEQMDEITKRKDSLNYQNAAFQCNFCYKGFIDANAWKHHVGKHDPSAGNIECPVCKFRFPTKRALQKHATNHEKKYACKSCPYVSKTTTQAKQHQRWHKGVTYTCEYCDEVSTKWTSYLSHVRIKHPSSFICSVCGYSFVSQLGLTMHKTMMHKDVHETEKADTSEESGPYCQECDVKFVSMEAYNRHMVTSVKHSQSDDFSKGCRVCGATFSNPEELRLHHRKEHARKRPKNYGKKPAGHSWPAKCEHCSEVIPNAREYWTHFRRVHPDKNYPIQKDYVCDVCGKSFRGNAFLIYHKRTHSAERQYKCEECGKSFYNRTNLSMHARTHSNSRPYPCDVCRKAFKCKGALDRHYRSHTGVKPYVCEVCGKAFGQSNSRKLHVRTVHLKQPTPYVSRNRIDRRNEQKGDTLIFVYPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336155;
90% Identity: -
80% Identity: -