Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352709.1:10676422-10679502[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.4e-06 0.00017 22.0 1.7 1 23 223 245 223 245 0.98

2 9 3.3e-08 1.6e-06 28.3 1.6 3 23 253 273 251 273 0.98

3 9 0.00011 0.0055 17.2 0.3 1 23 279 301 279 301 0.98

4 9 1.2e-05 0.0006 20.3 1.7 1 23 307 329 307 329 0.99

5 9 2.4e-05 0.0012 19.3 1.7 2 23 432 453 431 453 0.96

6 9 3.2e-09 1.6e-07 31.5 1.6 1 23 459 481 459 481 0.98

7 9 0.0027 0.13 12.9 0.6 3 23 489 509 487 509 0.97

8 9 6.9e-05 0.0034 17.9 1.5 1 23 515 537 515 537 0.99

9 9 0.021 1.1 10.0 0.8 1 23 543 567 543 567 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.4e-06	0.00017	22.0	1.7	1	23	223	245	223	245	0.98
2	9	3.3e-08	1.6e-06	28.3	1.6	3	23	253	273	251	273	0.98
3	9	0.00011	0.0055	17.2	0.3	1	23	279	301	279	301	0.98
4	9	1.2e-05	0.0006	20.3	1.7	1	23	307	329	307	329	0.99
5	9	2.4e-05	0.0012	19.3	1.7	2	23	432	453	431	453	0.96
6	9	3.2e-09	1.6e-07	31.5	1.6	1	23	459	481	459	481	0.98
7	9	0.0027	0.13	12.9	0.6	3	23	489	509	487	509	0.97
8	9	6.9e-05	0.0034	17.9	1.5	1	23	515	537	515	537	0.99
9	9	0.021	1.1	10.0	0.8	1	23	543	567	543	567	0.95

Sequence Information

Coding Sequence: ATGGATGCATTTCCCGCCGAGCAAGTGCCACGAACTAAATACTTAGAAAATACATCAACACCGTACGTACTATACAAGGATGGCGTGGAGCGCGCACCTCCCGGCACCCAGTGGGGCGGCACCGTCCTCGACGGGGGCTACCAGCCAATGCAGCACCAGAGCCCCGGCGGGCCGTCGCCGCAGCCAGAACCACAGCTGGCATCTCCGGCACCATCGCCCTACCCTGCCCCTCCTCCCTCCGATCAAACCGGCGCAGAGGAAGCCGCGCAACAGCTCGCCCAACAACAGGCCCAGCAGCAAGTCCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAAACTTCACCCGAACACATGACGGTCGAGCAACAGCTCCAAAACCAATCGCAACCCCAGACCCAAGATCACCTGGACAGAACACCGTGCTTCATCCCCCAACCCGACTTGCAACAACAATATACGCCGTACTTTAAAGAGACGAGGCCGACGGGCCACATGCTCGGAACGGGAGGATTCCCTTTGCATTATCTAAAACAAAACGGAGGGGTACTCTCGTTAGAAACTCCACTAGACCAATACGCGACGCCCGATTTGCGTCACCTGCCGGATATAGTGCAGCCAGAGCCGCCAAAGCCGCGGAAGCACAACCCAAACTCTGAGCTGCGACTGTTCAAgtgcctgacgtgcggcaaggacttcaaacagaagtcgacgctgttgcagcacgagcgcatccacacggactcgcggccgtacggctgccccgagtgcggcaagcggttccgtcagcagtctcacctgacgcagcacctgcgcatccatgccaacgagaagccgtacgcgtgcgtgtactgcccgcgctccttccgccagcgcgcgatcctcaaccagcacctgcgcatccattccggtgagaagccatatacgtgcggcgagtgcggcaaacatttccgccagaaggccatcctgaaccagcacgtccgcacacaccaagATGTGTCACCGCACCTCATCTTTAAGAACGGCACGACACCGACGCTGTGGCCGCAGGACGTGCCATACCCGCCGGACGAGAACAAGGAGGAGATCCTGTCGCAGTACGGCGACGACGGCCAGGGCGGCGAGCAGCGCGGCTCGTGCTTCTCCCCAGGTGACACGGCACAGTACCCCGCCTACTTCAAGGACACGAAGGGACTCAACCACACCGTGTTCAGTTCCGGCCTCTCGCTGCAGTACCTGAAGGGCGGCAAGTTACCCGACGTGCTCGGCGGCGcccgcgccatgccactctacgtgcggtgcccgatctgtcagaaggaattcaagcagaagtcaaccctgctgcagcacggctgcatccacatcgagtcgcgtccctacccgtgtcccgagtgcggcaagcgcttccgtcagcagtcgcatctaacgcagcacctgcgcatccacactaacgagaagccgtacggctgcgtgtactgtccgcgcttcttccgacagcgcaccattctgaaccagcacctgcgcattcacaccggcgaaaagccgtacaagtgcacgcagtgcggaaaggactttcggcagaaggcgatcttggaccagcacacgcgcacgcaccagggcgaccgacccttctgctgccccatgcccaactgccggcggaggttcgcaaccgagcccgaggtgaagaagcacatcgacaaccacatgaacccgcacgcggcgaaggCGCGCCGCACGGACGCTAACAAGACGCCGCGCCCGCTACCGCCCGCGTCGGCAGTCGTGAAGCCGGAGCTGTACTTCCCGCAGTGCTATGCGCCGCCGCCCTTCCAGCAGTTCCCTGCGGGCACGGAGTTCAAGCCAAACGTGGGGCCAGCCTGCTTGCCGGCGCAGTGA
Protein Sequence: MDAFPAEQVPRTKYLENTSTPYVLYKDGVERAPPGTQWGGTVLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPAPPPSDQTGAEEAAQQLAQQQAQQQVQQQQQQQQQQQTSPEHMTVEQQLQNQSQPQTQDHLDRTPCFIPQPDLQQQYTPYFKETRPTGHMLGTGGFPLHYLKQNGGVLSLETPLDQYATPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQDVSPHLIFKNGTTPTLWPQDVPYPPDENKEEILSQYGDDGQGGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFSSGLSLQYLKGGKLPDVLGGARAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRTDANKTPRPLPPASAVVKPELYFPQCYAPPPFQQFPAGTEFKPNVGPACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00358842;
90% Identity: iTF_01363324;
80% Identity: -