Basic Information

Insect: Electrophaes corylata
Gene Symbol: Sall1
Assembly: GCA_947095575.1
Location: OX352714.1:189577-192716[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.2e-05 0.0046 17.5 3.8 1 23 197 219 197 219 0.97

2 14 1.1e-05 0.00057 20.3 4.6 1 22 225 246 225 246 0.95

3 14 0.0046 0.23 12.1 1.2 1 19 265 283 265 284 0.89

4 14 2.8e-05 0.0014 19.1 0.2 1 21 289 309 289 310 0.95

5 14 0.0015 0.076 13.6 1.3 1 23 321 343 321 343 0.96

6 14 0.002 0.099 13.3 0.8 1 21 349 369 349 370 0.95

7 14 0.00079 0.04 14.5 2.1 2 23 379 401 378 401 0.94

8 14 0.0045 0.23 12.1 1.8 1 23 407 429 407 429 0.98

9 14 3.4e-05 0.0017 18.8 0.4 1 23 435 457 435 457 0.97

10 14 0.03 1.5 9.5 3.4 1 21 463 483 463 485 0.94

11 14 2.1e-06 0.00011 22.6 4.1 1 23 491 514 491 514 0.97

12 14 4.6e-06 0.00023 21.5 0.2 1 23 520 542 520 542 0.98

13 14 0.015 0.74 10.5 1.6 1 23 548 570 548 570 0.96

14 14 0.011 0.53 11.0 0.2 1 20 576 595 576 597 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.2e-05	0.0046	17.5	3.8	1	23	197	219	197	219	0.97
2	14	1.1e-05	0.00057	20.3	4.6	1	22	225	246	225	246	0.95
3	14	0.0046	0.23	12.1	1.2	1	19	265	283	265	284	0.89
4	14	2.8e-05	0.0014	19.1	0.2	1	21	289	309	289	310	0.95
5	14	0.0015	0.076	13.6	1.3	1	23	321	343	321	343	0.96
6	14	0.002	0.099	13.3	0.8	1	21	349	369	349	370	0.95
7	14	0.00079	0.04	14.5	2.1	2	23	379	401	378	401	0.94
8	14	0.0045	0.23	12.1	1.8	1	23	407	429	407	429	0.98
9	14	3.4e-05	0.0017	18.8	0.4	1	23	435	457	435	457	0.97
10	14	0.03	1.5	9.5	3.4	1	21	463	483	463	485	0.94
11	14	2.1e-06	0.00011	22.6	4.1	1	23	491	514	491	514	0.97
12	14	4.6e-06	0.00023	21.5	0.2	1	23	520	542	520	542	0.98
13	14	0.015	0.74	10.5	1.6	1	23	548	570	548	570	0.96
14	14	0.011	0.53	11.0	0.2	1	20	576	595	576	597	0.91

Sequence Information

Coding Sequence: ATGTTGGCCTTGACAACACCCACGGATGAATCTGTGTGCAGAGTGTGTCTTAGCAGTGATGTGCATTTGAGAACTTACAACATTGAAGATAGCAAACTCCTAGAACTATACGAAAAACTCACAGGTGCCAAGCTCAGCACAAAGAATAGAATGCCTAAAACAGTTTGCTCCTACTGTTATTATCGGTTGAAGAGGTTTGGGAAGTTCTCGGAAATGGCTCTTAAGTCTGCAATAGTTCTTTCAGAACTATATAACAATGGTTTGGAGAAGGTAACGCGCACCACTATTTCTACATTAAGCCTCGAAACAATACAGAATTTGTCTATAACTCCGGTCCAGTCTGTGTTCATGGGCGGTGATCACTCCATCAATGAATGCCCTGGAAGCTCCCTGCCGACCCCAATTTGGAACAGACCAGTAAACAGCTTTAACTACACTTATCATAGTCCTGTAGAACTTAAGTTGGAATGCATTAAAGAAGAAACAAAATGTGAAGATAGTTCTGTTAGAAGTGAGATGACGTGTAGTGAGGATGTGGACAGTAAACAGAGCCTGCTCAAAGCTGAAGCAAGCCAAGAGACAGCGACTTTCTGCTGTGATGTTTGCACAAAAACGTTTACAACAACATATCTGCTCAAGTCCCACTTAATAAGTCATTCCGAGGAAAAACCACATAACTGTAATTATTGTAACAAATCTTTCTCCAGAAAACATAATATGGTGCAGCACATGAAGACTTGTACTAAAGAACAGCTCAAGTCTGAGTCGGAGCCAGATGAACTCCTCCGCCCTTTCTTATGCGACGTGTGCGACAAAAGATTTACCTCTAAATCTCATAAAGTTATCCACAGCGGAGAGAAGCCATATGAATGTGAGGTATGTAAGAAATCCTTTGCCAGGAAGCAAGGCATGAAACAGCACATGCTAATTTGCACACGAGTTAAAATCCACGCCCCAACCTACCTCTGCCCCTATTGCAACAAAACGTTCGCGTGCGACAGCGATCTGAGCGAGCACATCACCACACACTCGGGAGACAAGCGGTACGCATGCGAGAAATGTCACAAGTGGTACACGAGCAAGCCGAACTTACGGCAGCATTTGAAGATTTGCTTCCTTGAGAACGAGGTGGTGACCTGCTCGTTTTGCCCCGACACATTCAGCCGCAGAAGCGATCTGTGCAAGCACCTGAACGCTTCACATGCCGCACAGAAGCCCTTCTCTTGCGACAGCTGCAGCGCTAACTTCTGGTACAAGAGCCACTTGAAGGCGCATCTGAGGATCCACACGGGGGAGAAGCCTTACGCGTGCGAAGTGTGCGGTAAGACCTTTACGCTAGGGAACCATCTGAAGGCACATCTCGGGACGCACACGGGAGTTAAACCGCATTCCTGTCAGGTGTGCGGCAAGGCGTTCCTAGCTCGTTTCAATCTTAGAGAACACATGCGGTGCCACACCGGCGAGCGCCCTCACCGCTGCGACAAGTGCGGCAAGGCCTTCGGACACCAGAGCACTCTTCGCCAGCATCTGCGTCGAGTCCACACGCTGGCCAAGCCGTTCCCTTGCACCAGATGCTCCTTCTCGTTCGCGCAGGAGAGTGCACTGACGGCCCACATGCGCGTCCACACGGCAGACAGGCCGCACGCCTGTCCCGTGTGCACTAAGACGTTTCTCGAGGTGCGTCACCTGAAAGGGCACATGCAGGTCCACTCGGGCGCCAGGCCTCACGCGTGCTCGGCGTGCGGGCTCGCGTACAAGCGCGCCGAGCACCTCAGGCTGCATGTCAGCTCCAAATGCAAGGCTCCACGAATTTTACCACCGTTTCATTTACAAACTTGA
Protein Sequence: MLALTTPTDESVCRVCLSSDVHLRTYNIEDSKLLELYEKLTGAKLSTKNRMPKTVCSYCYYRLKRFGKFSEMALKSAIVLSELYNNGLEKVTRTTISTLSLETIQNLSITPVQSVFMGGDHSINECPGSSLPTPIWNRPVNSFNYTYHSPVELKLECIKEETKCEDSSVRSEMTCSEDVDSKQSLLKAEASQETATFCCDVCTKTFTTTYLLKSHLISHSEEKPHNCNYCNKSFSRKHNMVQHMKTCTKEQLKSESEPDELLRPFLCDVCDKRFTSKSHKVIHSGEKPYECEVCKKSFARKQGMKQHMLICTRVKIHAPTYLCPYCNKTFACDSDLSEHITTHSGDKRYACEKCHKWYTSKPNLRQHLKICFLENEVVTCSFCPDTFSRRSDLCKHLNASHAAQKPFSCDSCSANFWYKSHLKAHLRIHTGEKPYACEVCGKTFTLGNHLKAHLGTHTGVKPHSCQVCGKAFLARFNLREHMRCHTGERPHRCDKCGKAFGHQSTLRQHLRRVHTLAKPFPCTRCSFSFAQESALTAHMRVHTADRPHACPVCTKTFLEVRHLKGHMQVHSGARPHACSACGLAYKRAEHLRLHVSSKCKAPRILPPFHLQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -