Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352710.1:2311073-2315798[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00028 0.014 15.9 1.1 1 23 136 158 136 158 0.97

2 13 0.00042 0.021 15.4 2.0 1 23 162 184 162 184 0.98

3 13 0.00028 0.014 16.0 0.1 2 23 188 209 187 209 0.97

4 13 2.7e-05 0.0014 19.1 0.7 1 23 230 252 230 252 0.98

5 13 1.5e-05 0.00076 19.9 0.3 1 23 260 282 260 282 0.98

6 13 4.6e-07 2.3e-05 24.7 2.7 1 23 288 310 288 310 0.99

7 13 1.6e-05 0.0008 19.9 2.2 2 23 317 338 316 338 0.97

8 13 1.8e-07 9.1e-06 26.0 0.4 1 23 344 366 344 366 0.96

9 13 8.2e-05 0.0041 17.6 3.2 1 23 372 394 372 394 0.96

10 13 5e-06 0.00025 21.5 0.5 1 23 400 422 400 422 0.97

11 13 0.061 3.1 8.6 5.9 3 23 430 450 428 450 0.97

12 13 3.6e-06 0.00018 21.9 2.6 1 23 456 478 456 478 0.99

13 13 0.00053 0.027 15.1 0.6 1 20 484 503 484 506 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00028	0.014	15.9	1.1	1	23	136	158	136	158	0.97
2	13	0.00042	0.021	15.4	2.0	1	23	162	184	162	184	0.98
3	13	0.00028	0.014	16.0	0.1	2	23	188	209	187	209	0.97
4	13	2.7e-05	0.0014	19.1	0.7	1	23	230	252	230	252	0.98
5	13	1.5e-05	0.00076	19.9	0.3	1	23	260	282	260	282	0.98
6	13	4.6e-07	2.3e-05	24.7	2.7	1	23	288	310	288	310	0.99
7	13	1.6e-05	0.0008	19.9	2.2	2	23	317	338	316	338	0.97
8	13	1.8e-07	9.1e-06	26.0	0.4	1	23	344	366	344	366	0.96
9	13	8.2e-05	0.0041	17.6	3.2	1	23	372	394	372	394	0.96
10	13	5e-06	0.00025	21.5	0.5	1	23	400	422	400	422	0.97
11	13	0.061	3.1	8.6	5.9	3	23	430	450	428	450	0.97
12	13	3.6e-06	0.00018	21.9	2.6	1	23	456	478	456	478	0.99
13	13	0.00053	0.027	15.1	0.6	1	20	484	503	484	506	0.93

Sequence Information

Coding Sequence: ATGCTGGACATCGATTCATCGTGTAGGACGTGTATGAAGAGTAATGTTCGATTAGTACACTTGTACGAAGCAGTGAACATTGATGAGAACAGTAATATTCAACTATTACAACTCCTGTTGGAATGTGCAGCTGTACAAGTAAAAAGTGATGATGGTTTACCACAAAATCTTTGTGAAGACTGCATCAAGGTGCTCCAAATATCATATACATTCCGTAGTCAGGCTGCAAAGGCGGAGGAACACTTCAAAATCCTTATACGAGAGCAGGTGAAACAGGAAATCAAAGCAGAAATTGATCATAACTACTATGATAACTATGATGAATTCTCATTAGACAATGACCTCAAGTCAGAACCAGATGAAAGACCAGACATAAAAATAATTAATAAAGATAATAAAAAAACTTACACATGCCCTACATGTGACAAAAGCTATGCAAAGGAGAAAAAGTATTTGAAGCATTTGGAACTCCATACATCACAATACTCGTGTGCTTATTGCAAGAAACGATTCTTACGAGAAGAGTCTCTACAGAAACATTTATTAAAACATGATCTTAGCAGATGCCAAATATGTGGGGAGCTATTTGCAGATGAGGCTCAGTTACTGCAACACATCACAACACATAACAGTCCAACAATCAAAAATGAAGAAGTTGATGAGCAAAATGAAGAAAAACCGGCATCCTACCCATGCAATGAATGTGAGAAGATTTTCAACAACACAAGATCACTTGCACTGCATCAGAAAAAACACAAACAACAAGAACCGCTTAGCTACTCATGTGATATTTGTGGGAAAGAGTATGTGTCAAAAGCATTAGTGAAACGGCACTTGAAACTACATGCTCAGGATAGGCCATTCAAGTGTACAACTTGTTCTAGAAGTTATTCAAGATCGGATCAGCTGAATGTTCATATGAAGACACATGCTGAGCAGAAACCAAAAGTCTGTCCATTCTGTAATAAAGCATTCACGCAAGTATGCAGTCTGAAAGACCACATACGCACTCACACTGGTGAGACTCCATACCTCTGCTCGGAGTGCGGACGAGGCTTTGCAAATAGCTCCAACTTGCGACAACATATGTTACGCCATACGGGATTGAAGCCCCACGCTTGTAAACTATGCCCCAAAACTTTTTGCACCAAAGGTCAAATGACAGCCCACCTAGTAACGCACACAGGTGCCCATCCTTACGAGTGCGATAAGTGTGGTGCGTCCTTCACTAAGCCGACATCTCTCAAGAAACATAGCATGATACATACGGGCCAGCGACCCTTCGGCTGCGACACTTGTCTTATGAGGTTTACGTGTAAGGATCATTTGAAACGTCACCAACGTATTCACACGGGAGAGAAGCCATACAAGTGCCGTTACTGCCAACGTGCCTTTACACAGAGCAACGATCTCGTCAAACATACGCGATCACATCTTGGACAGAATATCTACGATTGCTCAGTTTGCGGTATGCGGTTTCGACTGAAAAATGAGCTAAAGAAACACTACCCGGTCCACTTCAGCGACGACGGAGCTCTAAAGGAGCTGCCCAACGTAGATGACATACAGCCAGACACACGCATACAGCCAAACACAAACATACAGTCAGACACACACATACAAACAGACACCTACATACATACAAACACATCCAGAGCACAAACACCGAATATAACACCTACACTAACAAACTCAGAACACACACACATACCAGAAACACAAACAGAGTTATTACCAGACATACAAAGGCAGTTAGACAATGAAACGCAAATGAACTTGAAAAAAATCGGTATAGAAAAGTTTATGATTACTATAAATGATACTAATGGTATGGTGGCTATTAGTATTGAGCCTGAAACTAGATAA
Protein Sequence: MLDIDSSCRTCMKSNVRLVHLYEAVNIDENSNIQLLQLLLECAAVQVKSDDGLPQNLCEDCIKVLQISYTFRSQAAKAEEHFKILIREQVKQEIKAEIDHNYYDNYDEFSLDNDLKSEPDERPDIKIINKDNKKTYTCPTCDKSYAKEKKYLKHLELHTSQYSCAYCKKRFLREESLQKHLLKHDLSRCQICGELFADEAQLLQHITTHNSPTIKNEEVDEQNEEKPASYPCNECEKIFNNTRSLALHQKKHKQQEPLSYSCDICGKEYVSKALVKRHLKLHAQDRPFKCTTCSRSYSRSDQLNVHMKTHAEQKPKVCPFCNKAFTQVCSLKDHIRTHTGETPYLCSECGRGFANSSNLRQHMLRHTGLKPHACKLCPKTFCTKGQMTAHLVTHTGAHPYECDKCGASFTKPTSLKKHSMIHTGQRPFGCDTCLMRFTCKDHLKRHQRIHTGEKPYKCRYCQRAFTQSNDLVKHTRSHLGQNIYDCSVCGMRFRLKNELKKHYPVHFSDDGALKELPNVDDIQPDTRIQPNTNIQSDTHIQTDTYIHTNTSRAQTPNITPTLTNSEHTHIPETQTELLPDIQRQLDNETQMNLKKIGIEKFMITINDTNGMVAISIEPETR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01429239;
90% Identity: -
80% Identity: -