Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352714.1:3964872-3969483[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.9e-05 0.0014 19.1 2.4 2 23 171 192 170 192 0.96

2 14 0.00013 0.0064 17.0 1.8 3 23 200 220 199 220 0.98

3 14 0.00041 0.021 15.4 0.1 1 23 226 248 226 248 0.95

4 14 0.0014 0.071 13.7 3.4 1 21 254 274 254 276 0.94

5 14 3.5e-05 0.0018 18.8 3.0 1 23 282 304 282 304 0.98

6 14 5.1e-06 0.00026 21.4 0.5 1 23 310 332 310 332 0.98

7 14 0.19 9.3 7.1 0.5 1 20 338 357 338 359 0.90

8 14 9.3e-07 4.6e-05 23.8 2.8 1 23 386 408 386 408 0.98

9 14 3.3e-05 0.0016 18.9 0.7 2 23 415 436 415 436 0.97

10 14 3.4e-05 0.0017 18.8 3.6 1 23 442 464 442 464 0.99

11 14 1.5e-08 7.7e-07 29.4 0.9 1 23 471 493 471 493 0.98

12 14 1.8e-05 0.0009 19.7 0.1 1 23 499 521 499 521 0.95

13 14 1.6e-05 0.00078 19.9 3.5 1 23 527 549 527 549 0.99

14 14 0.0083 0.41 11.3 3.3 1 23 555 578 555 578 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.9e-05	0.0014	19.1	2.4	2	23	171	192	170	192	0.96
2	14	0.00013	0.0064	17.0	1.8	3	23	200	220	199	220	0.98
3	14	0.00041	0.021	15.4	0.1	1	23	226	248	226	248	0.95
4	14	0.0014	0.071	13.7	3.4	1	21	254	274	254	276	0.94
5	14	3.5e-05	0.0018	18.8	3.0	1	23	282	304	282	304	0.98
6	14	5.1e-06	0.00026	21.4	0.5	1	23	310	332	310	332	0.98
7	14	0.19	9.3	7.1	0.5	1	20	338	357	338	359	0.90
8	14	9.3e-07	4.6e-05	23.8	2.8	1	23	386	408	386	408	0.98
9	14	3.3e-05	0.0016	18.9	0.7	2	23	415	436	415	436	0.97
10	14	3.4e-05	0.0017	18.8	3.6	1	23	442	464	442	464	0.99
11	14	1.5e-08	7.7e-07	29.4	0.9	1	23	471	493	471	493	0.98
12	14	1.8e-05	0.0009	19.7	0.1	1	23	499	521	499	521	0.95
13	14	1.6e-05	0.00078	19.9	3.5	1	23	527	549	527	549	0.99
14	14	0.0083	0.41	11.3	3.3	1	23	555	578	555	578	0.97

Sequence Information

Coding Sequence: ATGAGCATAGCCCTTTGCCGAGCGTGTCTAACTGAAAATGCAAAAATGCAGGCCATCCGCGACACCCAACTTCATGAAGTCTACGAAAAACTGTCCAACTCTAAGCTTATAACAGAGGATGGAAGGCCTGATACAGTTTGCTACACTTGCTACTCACAGCTGCAAAGATGCCACAACTTTTCCGTTATGAGCCAAAAAGCTAACAAGTTACTTAAACAAAAGTATTGTGATGGCATTGAGATATCACAAGTAGATGTTTCTACACTACCTGAAACCTCTAACTCATTGGGCTCTTTGAAGAATTCTCCGGTCGATTCTCAACCACAAGACAATAAAGCTTGCAATGGAATTAAAATAGAATGTGATTCTGTTAAAACAGAATTAGTTCAAAGTGATGGAAGCTTCTGTGACATCAAAATAGAAGATACAAATAGCAATGACATCACAAGTTTAGAAGCATCAACGAAGAAATCAGTCAAGAAAAAAAAAACTTTTCgcgaaaagtcttgtgtctgtgataagtgcgataaaaagttcgcaaacgaaacatatttaaaagcacacgaaaagacccatagcgaagaaaagacaagtgcctgtgacaggtgcggtaaaacgtttcttgataaatatcgattgaagagacatatgaaatctcacacaggagaaaaaccatatgcttgcgaccaatgtgccagaacttataaagatataggcaacttgagaaaacatatagcggaccatacaggcgaaaagccacacatttgcacggaatgcagcgcgtcgttaacacgaaagggaagtttgcaacggcatatgagatgtcacactggggaaaagccttattcttgtgatgtttgtcaaaaatcaatgtctacaatgactcatttgaaaaggcatatgagaatccacacaggcgaacggccatacccatgtgatgtatgcgggaaggcatacgccgataaagacgattgcaaaaggcacatgcgaatacactctggagaaaaaccatacttatgcaacatttgtgattataaaagttttttcaagaaagctttaaagttgcatttaggaaACTTACAAGAACACGATCATAACAAGAAAAGTACGACACATGTAGATCAGCCACAGAAGAATCCGATAAGAAAGTCATTGtacagttgtgatatgtgttttaaaacatttgcacataatactaacttaaaagcacatatgaaaattcacattggagagaaattgaatgtttgtgatagatgcggaaaatcattcctaagtgcatatcagttaaaaaggcatgtgcgatctcacaccggagaaaaaccatataaatgcaatttctgttatagaacattctcagacaaaggtaaccaaacgaaacacgttcgaagtcattcagaaaacaaccgttcattcgtctgtacggaatgtaacgcatcattttcccaaaaaggcaacttacagcgccatatgagatctcacaccggagaaacgccatttttatgtgatatctgtctaaaatcactacccgatgctagtttgttaaaaagacacatgagaattcacacgggagaaaagccatacgtgtgtaacacgtgtggcaaagcatactctgataaggataactataaatgccatatgagacgtcacactggagaaaagccatatgtttgtaaattatgtgaTTACAAGTGTGCTTATGCGACTAGCTTGAGATATCATTTATCTAAAAAACATTCTGAAAACCAGTAG
Protein Sequence: MSIALCRACLTENAKMQAIRDTQLHEVYEKLSNSKLITEDGRPDTVCYTCYSQLQRCHNFSVMSQKANKLLKQKYCDGIEISQVDVSTLPETSNSLGSLKNSPVDSQPQDNKACNGIKIECDSVKTELVQSDGSFCDIKIEDTNSNDITSLEASTKKSVKKKKTFREKSCVCDKCDKKFANETYLKAHEKTHSEEKTSACDRCGKTFLDKYRLKRHMKSHTGEKPYACDQCARTYKDIGNLRKHIADHTGEKPHICTECSASLTRKGSLQRHMRCHTGEKPYSCDVCQKSMSTMTHLKRHMRIHTGERPYPCDVCGKAYADKDDCKRHMRIHSGEKPYLCNICDYKSFFKKALKLHLGNLQEHDHNKKSTTHVDQPQKNPIRKSLYSCDMCFKTFAHNTNLKAHMKIHIGEKLNVCDRCGKSFLSAYQLKRHVRSHTGEKPYKCNFCYRTFSDKGNQTKHVRSHSENNRSFVCTECNASFSQKGNLQRHMRSHTGETPFLCDICLKSLPDASLLKRHMRIHTGEKPYVCNTCGKAYSDKDNYKCHMRRHTGEKPYVCKLCDYKCAYATSLRYHLSKKHSENQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -