Ecor009319.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Electrophaes corylata
Gene Symbol
Znf296
Assembly
GCA_947095575.1
Location
OX352714.1:211835-218880[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.64 32 5.4 2.0 11 23 86 98 83 98 0.87
2 21 9.7e-07 4.8e-05 23.7 0.9 1 23 102 124 102 124 0.99
3 21 1.7e-08 8.4e-07 29.2 2.9 1 23 130 152 130 152 0.98
4 21 2.1e-06 0.00011 22.6 1.1 1 23 158 180 158 180 0.98
5 21 0.0034 0.17 12.5 4.0 1 23 186 208 186 208 0.97
6 21 6 3e+02 2.3 1.2 1 13 214 226 214 228 0.89
7 21 7.5e-05 0.0037 17.8 0.5 1 23 430 452 430 452 0.98
8 21 0.00016 0.0078 16.7 2.0 2 23 457 478 456 478 0.96
9 21 9.9e-06 0.00049 20.5 3.2 1 23 484 506 484 506 0.97
10 21 9.7e-05 0.0049 17.4 2.0 1 23 511 535 511 535 0.95
11 21 5e-07 2.5e-05 24.6 1.1 1 23 541 563 541 563 0.98
12 21 3.4e-07 1.7e-05 25.1 0.3 1 23 569 591 569 591 0.98
13 21 7.2e-05 0.0036 17.8 2.4 1 23 597 619 597 619 0.97
14 21 0.00097 0.049 14.2 0.3 1 23 625 647 625 647 0.97
15 21 7e-06 0.00035 21.0 2.1 1 23 653 675 653 675 0.97
16 21 8.1e-05 0.0041 17.6 2.8 2 23 695 716 695 716 0.98
17 21 4e-05 0.002 18.6 0.5 1 23 722 744 722 744 0.98
18 21 2.7e-05 0.0013 19.1 0.2 2 23 751 772 751 772 0.97
19 21 1.8e-06 9.1e-05 22.8 1.0 1 23 777 800 777 800 0.97
20 21 4.7e-05 0.0024 18.4 0.9 1 23 806 828 806 828 0.97
21 21 0.015 0.74 10.5 0.8 1 21 834 854 834 855 0.96

Sequence Information

Coding Sequence
ATGTCTACTGAGTCTGTGTGCCGAGTTTGTCTCGCCGGCAGCAGTGTTGGCAGACTACAAGTTACTGAAGACGCATATCTTCTTGAAACGTTCAAAAAACTAACCCGACTCCAGCTTAATACAGGAGACGGAAGGACCGGTAAACTGTGCTACATCTGTTTCTCACAGTTGCGGAAATGCTGCAGATTCTCCAAGATGGCGCTCAGATCTGACAGAGTTTTCCGAGACATAATCCACAATGAAGCTGAGGTAACTATTCATAGAGGTCATCTGAACAGACACATGAAGAGTCATATCAAATCATACGTCTGCGATAGATGCAGCAAAAAGTTCAGGCTAAAAAGTGCGCTTGAGGCGCATATGCGAACCCACACTGGAGAAAAACCATTCACCTGCGAAGTTTGCGGAAAAACGTTTAACCAGAAATCGCATTTGAAAACGCACATAAGAATCCACACCGAGGTCAAACCATTTACGTGTGAAACGTGCAGTAAAGCGTTCCGACAGCGTGGGCAGCTTATATCACATTTGCGAAGTCATACTGGGGAGAAACCTTTCGCGTGTAATCGATGTAATATGACATTTGGTCATCTCACTACCCTGAGGAAGCACAAGCGACTTCACAGTGAAGTGAAGTCGTATGCCTGTAACAGTTGTCCTATGTCATTCGATCAGAAAGTGTGCTGTTTGCACACTACAACAGTATTCATACAAACACACAGTTTTTACCCAAAAGGTCATAGTGAGGACAGAAGCTTGTCCGCAAGTTACATGTGGAACACAGTAATGTCCGCCGAGGCTGTGTGCCGGGTGTGCCTCGGCGGTGGCGTTAGAATGGACACTGTGGAAGATGAACGGCTTTTAGGATTGTACGAAAAACTCACCAGTGCTAAGTTGAACGCTAGAGATGGACGGCCTCACACTCTCTGCTTCATGTGCTCGGCGCAGCTGAGGCGATGCCGTCGGTTTGCAGACATGGCGCACCGGGCCGAGAGATCGCTACACAGCCTGCTGCAGAATAACCACAAGGTGACGCACGAGGCAATAGCCTCGCTGAAACTTGGCGCAACTCCAGCCCTGACTCTGAATACTCTGGAGAACGTGTCGTACGACGGCTACTCGTCGGACGGCTCCGCGCCGATGTTTTCCGAAGTTGCCGTCAAGCAGGAGTCGAGCCAAGAAGAAGCCTGTGATACCAAAACCGAACGGAACTCCGTCAACGAAGACTTCGATCAGGAGAGCATAAAGAAGGAGATGTTCACGAACACGAGCAGCACGGAACTGTATTACAACTGTGACGAGTGCCAGATAAAGTTCATGTCCAAGCGGCAACTTCTGGCGCACCTCAGGATACACAACTACGACACCTACTGCAAGAAATGTAATAAGCTGTTCTCGAACACGAGCAGCTTGAAGGGGCACATGAGCATCCACACCGGCGAGAGACCGTTCGCCTGCCACATATGCAGCAGGACGTTCCGCAAGAAGCCGTACCTCACCAGCCACATCAGGATGCACAACGAGAAGCCATTCTTCTGCACGTTCAACGGCTGCAACGCTGCCTTCGCGCACCCCGACCACTTGAACAAGCACATGCAGGTCCACACCAGAGAGAACCCCTTCGTATGCAACCGCTGCAATAAGACGTTCGCTTACAAGAGCGCCCTCACCAGACACGTGCGCATCCACACCGGCCTCAAGCCCTTCGTGTGCGACAACTGCGACATGACGTTCGCGGTGCAGAGCAGCCTCACCAAGCACATGCGGGTCCACTCCGGCGTGAAGCCCTTCGCCTGCAGCAAGTGCGAGGCCGCCTTCAACCACGCCGGCAACCTCAAGCGGCACCTGCACACGCACGCCAAGGACAAGCCCTACGCTTGTGAGCGCTGCGACAACAAGTTCTCGGACGAAGGAACTCTCAAGGAACATTCCAGGATCCATACCGGGGAGAAGCCGTACGCTTGCACCAAATGCGACATGAAGTTCACGTTCAATAGCACTCTGACGAAGCACATGGTGACTCACGACGAGAAGCCGGTGCCCAAGGAGCCGAGCCAGCCCTCGCGGCCCCGGGTGCGCCCTACGTGCCAGGTTTGCAAGAAGCAGCTCACGTCCAACTCGCACCTGATCATCCACATGAGGTCCCACACGGGCGAGCGACCCTACCCCTGCGAGATCTGCAACCAGACCTTCCGCACCAAGACTATACTGAAAGGTCACATGCGAGTTCACACCGGGGAGAAGGTCGCGTCTTGCGAGATCTGCGGCATGGCGTTCACTCAGACGGGCAGCTTGGGCAAGCACATGCGTCTGCACACCGGGGAGCTGTACGCGTGCCATCTCTGCGGCAAGGGCTACAAGCAGAGCGGCCAGCTGACCGCGCACATCAGGAACTTCCACGAAGGCATCAAGAGGTTCTCGTGCGACATCTGCAACGCCAGGTTCACGGCGCGAGGGCACCTCAGGAACCACATGAATGCGCATGCCGGCATCAAGCCCTACTCCTGCTTGAAATGTAGCAACAGGTTCGCGACCAGAACTGTTTTGCGACGGCATATCAAAAACTCTTGTAAATAG
Protein Sequence
MSTESVCRVCLAGSSVGRLQVTEDAYLLETFKKLTRLQLNTGDGRTGKLCYICFSQLRKCCRFSKMALRSDRVFRDIIHNEAEVTIHRGHLNRHMKSHIKSYVCDRCSKKFRLKSALEAHMRTHTGEKPFTCEVCGKTFNQKSHLKTHIRIHTEVKPFTCETCSKAFRQRGQLISHLRSHTGEKPFACNRCNMTFGHLTTLRKHKRLHSEVKSYACNSCPMSFDQKVCCLHTTTVFIQTHSFYPKGHSEDRSLSASYMWNTVMSAEAVCRVCLGGGVRMDTVEDERLLGLYEKLTSAKLNARDGRPHTLCFMCSAQLRRCRRFADMAHRAERSLHSLLQNNHKVTHEAIASLKLGATPALTLNTLENVSYDGYSSDGSAPMFSEVAVKQESSQEEACDTKTERNSVNEDFDQESIKKEMFTNTSSTELYYNCDECQIKFMSKRQLLAHLRIHNYDTYCKKCNKLFSNTSSLKGHMSIHTGERPFACHICSRTFRKKPYLTSHIRMHNEKPFFCTFNGCNAAFAHPDHLNKHMQVHTRENPFVCNRCNKTFAYKSALTRHVRIHTGLKPFVCDNCDMTFAVQSSLTKHMRVHSGVKPFACSKCEAAFNHAGNLKRHLHTHAKDKPYACERCDNKFSDEGTLKEHSRIHTGEKPYACTKCDMKFTFNSTLTKHMVTHDEKPVPKEPSQPSRPRVRPTCQVCKKQLTSNSHLIIHMRSHTGERPYPCEICNQTFRTKTILKGHMRVHTGEKVASCEICGMAFTQTGSLGKHMRLHTGELYACHLCGKGYKQSGQLTAHIRNFHEGIKRFSCDICNARFTARGHLRNHMNAHAGIKPYSCLKCSNRFATRTVLRRHIKNSCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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