Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352714.1:5206142-5209053[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.9e-07 1.5e-05 25.3 2.3 1 23 158 180 158 180 0.98

2 17 3.9e-05 0.0019 18.6 0.2 1 23 186 208 186 208 0.96

3 17 2.5e-05 0.0013 19.2 2.7 1 23 214 236 214 236 0.97

4 17 0.0013 0.065 13.8 0.7 1 20 241 260 241 261 0.95

5 17 4.8e-07 2.4e-05 24.6 1.6 1 23 270 292 270 292 0.99

6 17 2.1e-06 0.00011 22.6 0.3 1 23 298 320 298 320 0.97

7 17 1.6e-06 8.2e-05 23.0 1.0 1 23 326 348 326 348 0.98

8 17 0.00011 0.0056 17.2 0.5 1 23 354 376 354 376 0.97

9 17 2.8e-06 0.00014 22.2 2.8 2 23 389 410 388 410 0.97

10 17 6.1e-07 3.1e-05 24.3 1.2 1 23 416 438 416 438 0.98

11 17 3.9e-06 0.0002 21.8 0.1 1 23 444 466 444 466 0.98

12 17 6.2e-06 0.00031 21.1 0.5 1 23 472 494 472 494 0.98

13 17 8.8e-06 0.00044 20.7 0.3 1 23 500 522 500 522 0.97

14 17 3.9e-06 0.00019 21.8 0.8 1 23 528 550 528 550 0.98

15 17 0.00015 0.0076 16.8 0.5 1 23 556 578 556 578 0.98

16 17 3.7e-06 0.00019 21.9 2.6 1 23 584 606 584 606 0.99

17 17 0.0001 0.0052 17.3 0.4 1 20 612 631 612 632 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.9e-07	1.5e-05	25.3	2.3	1	23	158	180	158	180	0.98
2	17	3.9e-05	0.0019	18.6	0.2	1	23	186	208	186	208	0.96
3	17	2.5e-05	0.0013	19.2	2.7	1	23	214	236	214	236	0.97
4	17	0.0013	0.065	13.8	0.7	1	20	241	260	241	261	0.95
5	17	4.8e-07	2.4e-05	24.6	1.6	1	23	270	292	270	292	0.99
6	17	2.1e-06	0.00011	22.6	0.3	1	23	298	320	298	320	0.97
7	17	1.6e-06	8.2e-05	23.0	1.0	1	23	326	348	326	348	0.98
8	17	0.00011	0.0056	17.2	0.5	1	23	354	376	354	376	0.97
9	17	2.8e-06	0.00014	22.2	2.8	2	23	389	410	388	410	0.97
10	17	6.1e-07	3.1e-05	24.3	1.2	1	23	416	438	416	438	0.98
11	17	3.9e-06	0.0002	21.8	0.1	1	23	444	466	444	466	0.98
12	17	6.2e-06	0.00031	21.1	0.5	1	23	472	494	472	494	0.98
13	17	8.8e-06	0.00044	20.7	0.3	1	23	500	522	500	522	0.97
14	17	3.9e-06	0.00019	21.8	0.8	1	23	528	550	528	550	0.98
15	17	0.00015	0.0076	16.8	0.5	1	23	556	578	556	578	0.98
16	17	3.7e-06	0.00019	21.9	2.6	1	23	584	606	584	606	0.99
17	17	0.0001	0.0052	17.3	0.4	1	20	612	631	612	632	0.94

Sequence Information

Coding Sequence: ATGTCTGGTTTACCTGTGTGCAGGGTTTGTTTAGTGGACAATGTCAGAATGCAACCTATTCAGAGTCCACAGCTACAAGAAGTATTTGAAATCCTTGCAAATAATAAAGTAACAGAAGAAGCTGTTAAAATGCTGAATGGAGGTTATCAATTAAATATTTTAGCACCAACAATGCAACCTATAGCCTTCCACAATTTCTCTTCCGAAGCAGAGTTGGGCCTAACAGATTGTGTCAAACAGGAACGGCGCGCATCAGAAGTGTGTCCGTTTGAGTATGTTGAAGAAGATGTCAAAATGGATCCTGTTGAATTTGTTGAAGCAACAGCTTCAACAGAAATTAAAGAAGAAAACACTGAACTTCATAAAAGCGACCAAGAATTTTCACAAACAAACAATGTTAAAAAGGAGCATCAATCCTCTAGTGCCAAATATGTTACCGCATCGGCAAATATCCTAAACAGAAAAATGCAATTTACCTGCACTATTTGTGGAAAGTCATACTCTAacagatatgttttaaaacgacacatgaaaaatcattcagtagaaaaatcacatgcttgtgatctttgcgctaaaacattccccgaaaacagtgacctagtaatacacatgagagtacactctgatgaaaagccatttgcctgcagcttgtgtgataagaaattctatgaaaattacaagttgaaaaaacatatgaaactccacacagaagatggatttgcctgtgcgatgtgtgataaaacatttgataaacaccatgacttggaaatgcatatcagttgcatgcatgcaggagtaaagccttacgtttgtgaaatgtgtaataaaaggtttgcttttaagtccaaattagaaagacatgtgcgaacccacacagaagaaaaaccatttgcttgtgacatgtgcaataaaacattcgctgaaagcgggaacctgaaaattcacaggcgtgtacataccggcgaaaaaccttattcctgtgaaatatgccagaagcagttcacaacaaataacactttgaaaactcacatggcaatacatagcggcgaaaagttatttgcctgcgatagatgcgacaaatcttttccagttattgagtatttgaagcgtcacaaaaaagtccactctgaagaaaagagaaagtctgatgccttttcgagtacctgtgacagatgcggtaaaacgtttgttgataaatgtgctctgagaaaacacatgaaaatacatactgcagaaaaatcgtttgtttgtgacatgtgcgataaaagatttgcggtgaagtctaaattaaaacgacatgtcaggagtcacacagaagaaagaccctatgcctgtaatttgtgtgataaagcgtttgctgaaactggaagcttaaagactcacatgagagtacatactggtgaaaagccttattcttgtgacgcgtgcgggaaaggcttcgctcagtctaactccttgaagaagcatcttacaactcatactggggaaaggcagtttgcctgcgttgtctgttataaaagcttcgccgttaaaaataacttgacagaccacatgagaatacacagtggagaaaagccttacatctgcagtatatgcaatcggggtttcgcccagtctaattccttaaagaaacatcttacaactcacacaggggaaaagcagttttcttgtgtcatctgtttcaaaacttttgcagctaaaaatagctggaaaattcacatgagggttcatagtggtgaaaaaccatattcctgcaactcgtgcagtaaatcatttatagatagcagcactttgagtaggcataagagaacgcacacgggtgaaaacccatacacatgtattgaatgcaataagtcatttagtagaaaagcttatttacaaaaacatgtGGCATTTTGCAAACGTTGA
Protein Sequence: MSGLPVCRVCLVDNVRMQPIQSPQLQEVFEILANNKVTEEAVKMLNGGYQLNILAPTMQPIAFHNFSSEAELGLTDCVKQERRASEVCPFEYVEEDVKMDPVEFVEATASTEIKEENTELHKSDQEFSQTNNVKKEHQSSSAKYVTASANILNRKMQFTCTICGKSYSNRYVLKRHMKNHSVEKSHACDLCAKTFPENSDLVIHMRVHSDEKPFACSLCDKKFYENYKLKKHMKLHTEDGFACAMCDKTFDKHHDLEMHISCMHAGVKPYVCEMCNKRFAFKSKLERHVRTHTEEKPFACDMCNKTFAESGNLKIHRRVHTGEKPYSCEICQKQFTTNNTLKTHMAIHSGEKLFACDRCDKSFPVIEYLKRHKKVHSEEKRKSDAFSSTCDRCGKTFVDKCALRKHMKIHTAEKSFVCDMCDKRFAVKSKLKRHVRSHTEERPYACNLCDKAFAETGSLKTHMRVHTGEKPYSCDACGKGFAQSNSLKKHLTTHTGERQFACVVCYKSFAVKNNLTDHMRIHSGEKPYICSICNRGFAQSNSLKKHLTTHTGEKQFSCVICFKTFAAKNSWKIHMRVHSGEKPYSCNSCSKSFIDSSTLSRHKRTHTGENPYTCIECNKSFSRKAYLQKHVAFCKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -