Basic Information

Insect: Electrophaes corylata
Gene Symbol: -
Assembly: GCA_947095575.1
Location: OX352726.1:4572039-4576054[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.0024 0.12 13.0 1.3 1 23 181 203 181 203 0.97

2 30 8.3e-07 4.1e-05 23.9 2.9 1 23 209 231 209 231 0.97

3 30 3.3e-05 0.0017 18.8 0.9 1 23 237 259 237 259 0.96

4 30 1.8e-05 0.00088 19.7 1.3 1 23 265 287 265 287 0.93

5 30 2.5e-06 0.00013 22.4 2.6 1 23 293 315 293 315 0.98

6 30 5.3e-07 2.7e-05 24.5 1.4 2 23 322 343 321 343 0.96

7 30 0.0024 0.12 13.0 0.9 1 23 349 372 349 372 0.91

8 30 0.0033 0.17 12.6 0.8 1 23 378 400 378 400 0.93

9 30 5.7e-05 0.0029 18.1 0.5 1 23 406 429 406 429 0.96

10 30 5.7e-05 0.0029 18.1 1.4 1 23 435 457 435 457 0.93

11 30 0.00038 0.019 15.5 0.2 1 23 463 485 463 485 0.98

12 30 4e-06 0.0002 21.7 1.3 1 23 491 513 491 513 0.98

13 30 1.8e-05 0.00091 19.7 1.5 1 23 519 541 519 541 0.96

14 30 2.1e-05 0.0011 19.5 0.6 1 23 547 569 547 569 0.98

15 30 1.9e-06 9.3e-05 22.8 0.1 1 23 575 597 575 597 0.98

16 30 1.3e-05 0.00066 20.1 0.7 1 23 603 625 603 625 0.98

17 30 6.2e-07 3.1e-05 24.3 2.3 1 23 631 653 631 653 0.96

18 30 0.0082 0.41 11.3 0.2 1 20 659 678 659 681 0.91

19 30 4.5e-07 2.2e-05 24.7 0.9 1 23 687 709 687 709 0.98

20 30 8.8e-06 0.00044 20.7 1.4 1 23 715 737 715 737 0.98

21 30 0.011 0.55 10.9 0.6 1 23 743 766 743 766 0.91

22 30 8e-05 0.004 17.7 1.5 2 23 773 794 772 794 0.92

23 30 0.00013 0.0066 17.0 0.6 1 23 800 822 800 822 0.98

24 30 0.0021 0.1 13.2 0.4 1 23 828 850 828 850 0.96

25 30 8.5e-06 0.00043 20.7 0.8 1 23 856 878 856 878 0.96

26 30 0.00014 0.0068 16.9 0.9 1 23 884 906 884 906 0.99

27 30 6.2e-07 3.1e-05 24.3 2.3 1 23 912 934 912 934 0.96

28 30 6.4e-05 0.0032 18.0 0.9 1 23 940 962 940 962 0.99

29 30 2.8e-06 0.00014 22.3 1.7 1 23 968 990 968 990 0.96

30 30 4.3e-06 0.00022 21.6 1.3 1 23 996 1018 996 1018 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.0024	0.12	13.0	1.3	1	23	181	203	181	203	0.97
2	30	8.3e-07	4.1e-05	23.9	2.9	1	23	209	231	209	231	0.97
3	30	3.3e-05	0.0017	18.8	0.9	1	23	237	259	237	259	0.96
4	30	1.8e-05	0.00088	19.7	1.3	1	23	265	287	265	287	0.93
5	30	2.5e-06	0.00013	22.4	2.6	1	23	293	315	293	315	0.98
6	30	5.3e-07	2.7e-05	24.5	1.4	2	23	322	343	321	343	0.96
7	30	0.0024	0.12	13.0	0.9	1	23	349	372	349	372	0.91
8	30	0.0033	0.17	12.6	0.8	1	23	378	400	378	400	0.93
9	30	5.7e-05	0.0029	18.1	0.5	1	23	406	429	406	429	0.96
10	30	5.7e-05	0.0029	18.1	1.4	1	23	435	457	435	457	0.93
11	30	0.00038	0.019	15.5	0.2	1	23	463	485	463	485	0.98
12	30	4e-06	0.0002	21.7	1.3	1	23	491	513	491	513	0.98
13	30	1.8e-05	0.00091	19.7	1.5	1	23	519	541	519	541	0.96
14	30	2.1e-05	0.0011	19.5	0.6	1	23	547	569	547	569	0.98
15	30	1.9e-06	9.3e-05	22.8	0.1	1	23	575	597	575	597	0.98
16	30	1.3e-05	0.00066	20.1	0.7	1	23	603	625	603	625	0.98
17	30	6.2e-07	3.1e-05	24.3	2.3	1	23	631	653	631	653	0.96
18	30	0.0082	0.41	11.3	0.2	1	20	659	678	659	681	0.91
19	30	4.5e-07	2.2e-05	24.7	0.9	1	23	687	709	687	709	0.98
20	30	8.8e-06	0.00044	20.7	1.4	1	23	715	737	715	737	0.98
21	30	0.011	0.55	10.9	0.6	1	23	743	766	743	766	0.91
22	30	8e-05	0.004	17.7	1.5	2	23	773	794	772	794	0.92
23	30	0.00013	0.0066	17.0	0.6	1	23	800	822	800	822	0.98
24	30	0.0021	0.1	13.2	0.4	1	23	828	850	828	850	0.96
25	30	8.5e-06	0.00043	20.7	0.8	1	23	856	878	856	878	0.96
26	30	0.00014	0.0068	16.9	0.9	1	23	884	906	884	906	0.99
27	30	6.2e-07	3.1e-05	24.3	2.3	1	23	912	934	912	934	0.96
28	30	6.4e-05	0.0032	18.0	0.9	1	23	940	962	940	962	0.99
29	30	2.8e-06	0.00014	22.3	1.7	1	23	968	990	968	990	0.96
30	30	4.3e-06	0.00022	21.6	1.3	1	23	996	1018	996	1018	0.99

Sequence Information

Coding Sequence: ATGTCTTCGGATAGTTCTGTTTGCAGAGTATGTCTAGCTGGGAATATCAGGATGCTGCATATTGACATGCACCTCTTACAGCTATTCGAGGAACTTACAAACTCAAAGGTGAACACAGAATCAGATGCAGGGATGCCCGTCACAGTATGCTATGTCTGTCACCGACAGCTGCAGAGATGCCACCAGTTCTCCGACATGGCTCGCAAATCCGACAGAACCATGCGCGACATGTTGCACAATAATATTGAGATAACATGCAGTATGATCACAATGCTGTCTCTGGCAACAATACCAACCTTATCTGTGGCCCCTATACAGCACATGTCTTTTATTGATTATTCGAACACCACCTGTAATTCTGCCACTGTCAAAGAGGAACAAGTTATAAAAGTAGAAGAAACAACTGAAACTGAAGCATCAGTCTTTGAGGAATTACAGGTGACACCTGATGAAGATGCTAAAGTTATTGATGATTCTAATGAATTATGTGTAGAAAATGCAGATGAAATGGAGAGTGAGCAAACTAACACTCATTTATATTTCTAttgtgatgtgtgcaacaaaaaaatcttctctaaacgtgagttgttaagacatttaaaagcacacactagtaaaaagacacattcctgcaaccagtgtcctaaaacattttcatctataagtaatttgaaatcacatatgagattacacactggagaaaagccatatttatgcccgagatgtggtacagcatttgctcatagacaatatttaaaatcacacatgcttatacacactggagaaaggccatattcatgcattagatgtgataaagcatttactcgaaagagtagtttggaaaaacacatgagtttacatactagagaaaagtcatatccttgcaaaagatgtcatgaagtatttactcaaaaagatcaattgaaaattcacatgaaattacacactagagataagacatgttcatgcagtagatgtggtaaggcatttgctagaaaatccgatttggtggtccacatgcgaatgcatactggagaaaagccatattcatgcattagatgtgataaagcattcactgtaaggagtcaattgacagctcataatatgcgtaaacacactggagaaaagccacattcatgtattatatgtgataaagcatttgttcttaaaacaagtctgataatacacacgcggtcacatactggagaaaagccatattcatgcagtttatgtgataaagcatttactgtaaggggtcaattgacagctcataatatgcgaaaacacactggagaaaagccacattcatgtattatatgtggtaaagcatttgttgataaaacaagtctgacaagacacacacggttacacactggagaaaagccatattcatgcagtgtatgtgacaaagcatttgctgcaaaaggtgaattgacatttcacatgcgattacacactggagagaagctgtactcatgcagtatatgtgataaaagatttattcacaaaaacgaattggggaatcacatccgaatacatactggagaaaagccatattcatgcattatatgtgataaagcatttactcaaaagcaacaaatgacacgtcacatgaaatcacacactggagaaaagccatattcttgtgctacatgtgatagagcgtttgcttataaaagtgttttatccaaccacatgaaaacacactctggagaaaagccatattcatgcagtatatgtgacaaagcatttgctgcaaaaggtgaattgacacttcacatgcgatcacacactggagagaagctgtattcatgcagtagatgtgataaaggatttattcgcaaaaacgatatggagaaacatatgttaatacatactggagaaaagccatattcatgcattatatgtaagaaaacatttactcaaaagggtcaattgacacgtcacatgcgaacgcacactggagaaaagccatattcatgtattatatgtgataaagcacttgctgataaaacaagtctgacaagacacatgtggtcacacactggagaaaagccatattcatgcagtaaatgtgacaaagcatatgctagaaaaggtcaattgacacttcacatgcgatcacacactggagagaagccgtattcatgcagtagatgtgataaaagatttattcgcaaaaacgatatggagaaacacatgctaatacatactggggaaaagccatattcatgcattagatgtgataaagcatttactgtaaggggtcaattgacagttcataatatgcgaaaacacactggagaaaagccacattcatgtattacatgtgataaagcatttgttgataaaacaagtctgacaatacacatgcggtcacacactggagaaaagccatattcatgcagtatatgtgacaaagcatttcctgcaaaaaatcaattgacatttcacatgcgatcacacactggagagaagccgtatctatgcagtagatgtgataaaggatttcttcgtaaaaacgatttggagatgcacatgctaatacatactggagaaaagccatattcatgcattatatgtgataaagcatttactcaaaagccacaaatgacacgtcacatgcgatcacacactggagaaaagccatattcttgtactagatgtgatagagcgtttgcttataaaattgttttatccaaccacatgaaaacacacactggagaaaagccatattcatgcattatatgtaagaaaacatttactcaaaagggtcaattgacacgtcacatgcgaacgcacactggagaaaagccatattcatgtactagatgtgatagagcgtttgctcttaaaagtgttttatccaaccacatgaaaacacacactggcgaaaagccatattcatgcattatatgtaagaaaacatttactcaaaagggtcaattgacacttcacatgcgaacgcacactggagaaaagccatattcatgtactagatgtgatagagcgtttgctcgtaaaagtgttttatccaaccacatgaaaacacacactgaagaaaagccatattga
Protein Sequence: MSSDSSVCRVCLAGNIRMLHIDMHLLQLFEELTNSKVNTESDAGMPVTVCYVCHRQLQRCHQFSDMARKSDRTMRDMLHNNIEITCSMITMLSLATIPTLSVAPIQHMSFIDYSNTTCNSATVKEEQVIKVEETTETEASVFEELQVTPDEDAKVIDDSNELCVENADEMESEQTNTHLYFYCDVCNKKIFSKRELLRHLKAHTSKKTHSCNQCPKTFSSISNLKSHMRLHTGEKPYLCPRCGTAFAHRQYLKSHMLIHTGERPYSCIRCDKAFTRKSSLEKHMSLHTREKSYPCKRCHEVFTQKDQLKIHMKLHTRDKTCSCSRCGKAFARKSDLVVHMRMHTGEKPYSCIRCDKAFTVRSQLTAHNMRKHTGEKPHSCIICDKAFVLKTSLIIHTRSHTGEKPYSCSLCDKAFTVRGQLTAHNMRKHTGEKPHSCIICGKAFVDKTSLTRHTRLHTGEKPYSCSVCDKAFAAKGELTFHMRLHTGEKLYSCSICDKRFIHKNELGNHIRIHTGEKPYSCIICDKAFTQKQQMTRHMKSHTGEKPYSCATCDRAFAYKSVLSNHMKTHSGEKPYSCSICDKAFAAKGELTLHMRSHTGEKLYSCSRCDKGFIRKNDMEKHMLIHTGEKPYSCIICKKTFTQKGQLTRHMRTHTGEKPYSCIICDKALADKTSLTRHMWSHTGEKPYSCSKCDKAYARKGQLTLHMRSHTGEKPYSCSRCDKRFIRKNDMEKHMLIHTGEKPYSCIRCDKAFTVRGQLTVHNMRKHTGEKPHSCITCDKAFVDKTSLTIHMRSHTGEKPYSCSICDKAFPAKNQLTFHMRSHTGEKPYLCSRCDKGFLRKNDLEMHMLIHTGEKPYSCIICDKAFTQKPQMTRHMRSHTGEKPYSCTRCDRAFAYKIVLSNHMKTHTGEKPYSCIICKKTFTQKGQLTRHMRTHTGEKPYSCTRCDRAFALKSVLSNHMKTHTGEKPYSCIICKKTFTQKGQLTLHMRTHTGEKPYSCTRCDRAFARKSVLSNHMKTHTEEKPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00638821;
90% Identity: iTF_00638821;
80% Identity: -