Ecor002431.1
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- clz9
- Assembly
- GCA_947095575.1
- Location
- OX352702.1:6400600-6403317[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-09 5.2e-06 26.2 0.2 3 38 16 52 14 59 0.84 2 2 1.4 1.2e+03 -0.6 0.1 30 44 638 653 635 654 0.85
Sequence Information
- Coding Sequence
- ATGGTGCGGAACTATAAACGAAAAAAAGAGAAGCCATATACCCAAGCCCAGCTTATTGAGGCTGTTGAAGCAGTGCGTACCAAAAAAATTAATAGCTACACTGCTGCTGAGAAATATGGGATCCCAAGGTCTACTATTATCGCTCGACTGTATGGTACCCGAGGAGCTAAAATGCCTAGAGCGGGAAGGCCTGGAGTGTTTTCCATAGAAATGGAGAAAAAAATTGCATCCTATATTCACATACTTgagaaatgtggatatccactaacaaaaaaagaaatcatagttatgatttccgaatatattcggcgaaatggtattgtaactccatttacaaatgatgtcccaggaaaagaatggtttcaagcttttcgtaaacgacataaactgtcgtataaaaaaccacagtctgttgaaatcgcaagaaaaagggcctgcaacccttttatcgtttatgagtattttgacatgcttgaaaaggtcacgcaagaattagagattacggataaacccgaacaaatttttaatttggacgaaacgagtttttgctcagatccatctaaaagcaaaatagttggacttactggatatcaatctactagaacaacaagcggccctggacgcgaaaatacaactgttttgctagccaccagtgccagtggtataaagattccaccattggtaatatttcagggaaaatatctctggaatgagtggatgtatcaaaataatgaagtaaaaactgcctatgcagtaagccaaaaaggatggatggagacgactatctttgaaaaatatttaaaagatgtttttatacccgcaatcggtgacaaaaggcccgtgttactgatttatgacgggcattctacccatgtcgatttgagtgtggtagaactagcagcatctaaagagatcaccattataaaattgcccccacattcatcacacgtgctgcaacctctggattgtagcacgatgaaaccaatgaaagacagatgggaagatgcactggtcaagtggcagcggttgcacgtaggaatgaaactgccaaaagcagaatttgcacggattattaccgagatttggaattccttaaatcccgttatattacaaaatggttttagaaaaacaggaattttccccgtcaaTAGACACGCAATCCCAGAGGAAAAATTTGATTCCTTGTCATGGCTAAAGTGGAAGCAATATATTGAACAACAGACCAATGCCAATAGCTCCTACACTGAAAATTGCCTCGACGATGAATCTCCTCAAAATGGGTCCAGATTCCTAAACCGCGATAGACCATGTCAAGAACATTTTTCCATTCAAAATTCTTTAATTGAAAGTTTCCACGAAGAAGAGCCTGACCAGTTTGATCTCGAATCACCTATCAAAGTAGTACCAAGTCTTTTGACCTTGGTTATTAATAAAATCAACTCAAGGAAACAACCAAACAAAAATACAAACAAACCTATTGAACCAACAAAAATATTGAATGAACCAACTACTGATACAACAAATAACAAGGAGAAGGCTATTATTCATCGGTCAACAAACCAAGCTGAAGCTTACAAACTACCCTTACCAAACAAACCTGCAACTAATTGGGCACCTTCTGTAAAAATATTATCTAATGAAATGATCGTACCTAAAAGAATGTGTAGCTCACATGAAGAGTTCCATCCCAAGCAGGATGAGACAAACATATCATTTGAACAGTTAGTTTTACAGTCCATAGCACGAAATGATATACCCAAGAAAACTAAGAAACGCGTTAATACTAAGGGTGCAGAAGTGTTAACATATAAAGCTACAATAGAGCGAATGAAAAAAGAGATGCAAGAAAAAAACAAAAAAGAAACAGAGAAAAAACAGAAAAGTGAAGTATTCAAACAGCGTAATGTACAGAAATCGACAATAAGACAAAATTTTAAAGAAGAAAAGAATACCCACAGGCGTGCATCTGTAAAGCGAAAACACGACCGATATGATAGTGAATCGAGCTCAATATCAGCTATTTCAAACGTTGAATTATCTGACAAAGAAAACATTTATAACGAAAAGGAAGCAAATAAAAAAACGAAAAAGGTTTTATCTAACAGGAATAAAGTGCAAAAAACAACAAAGAAGCAGAGTTCCAAAGGACAAAAGACTACGCAAAGACATGCATTAATAAAAAAAAGAAAGAAACGATTAGATAGCGAATCCACCTCATTATCATCAAACTGTACTTTTGAATTAGATGACACGGACCATTCAGATTATGAAACACTACATGATTACTATATAGCTCAATGCTTACGCGAACAAGAAGAGAAAGGACTTGAAGCTGAATGCTTTATCGAACAAGAAGAAAAAGAAAATGTCGAACCGGAAATTCCGTTTGGTTTGCATGACATTGTTTATAGCATTGACGAAAAAGTAAATTTAAAAGTAGATGACTGGGTTATAGCCCGATTCTCTACCAAAAAGAGCGTAAAGCATTTCGTAGGCAAAGTTTTGTCACTAAATGATTTAAAGTGTCCTACAGTTAAATTTGTGAGAAAGGTGAAAAATTCCAAATCTGAGAAGGGTACGTTTACCTATCCTACCGTGGACGATGTTTGCGTTATTAAACATTTAGACGACGTACTTTTAGTGTTGCCTGAACCAAAGATTGCTCGACGTGGACAATTGATTTTCGATTTTAATTTCAGCTATTATAATATTCAATAA
- Protein Sequence
- MVRNYKRKKEKPYTQAQLIEAVEAVRTKKINSYTAAEKYGIPRSTIIARLYGTRGAKMPRAGRPGVFSIEMEKKIASYIHILEKCGYPLTKKEIIVMISEYIRRNGIVTPFTNDVPGKEWFQAFRKRHKLSYKKPQSVEIARKRACNPFIVYEYFDMLEKVTQELEITDKPEQIFNLDETSFCSDPSKSKIVGLTGYQSTRTTSGPGRENTTVLLATSASGIKIPPLVIFQGKYLWNEWMYQNNEVKTAYAVSQKGWMETTIFEKYLKDVFIPAIGDKRPVLLIYDGHSTHVDLSVVELAASKEITIIKLPPHSSHVLQPLDCSTMKPMKDRWEDALVKWQRLHVGMKLPKAEFARIITEIWNSLNPVILQNGFRKTGIFPVNRHAIPEEKFDSLSWLKWKQYIEQQTNANSSYTENCLDDESPQNGSRFLNRDRPCQEHFSIQNSLIESFHEEEPDQFDLESPIKVVPSLLTLVINKINSRKQPNKNTNKPIEPTKILNEPTTDTTNNKEKAIIHRSTNQAEAYKLPLPNKPATNWAPSVKILSNEMIVPKRMCSSHEEFHPKQDETNISFEQLVLQSIARNDIPKKTKKRVNTKGAEVLTYKATIERMKKEMQEKNKKETEKKQKSEVFKQRNVQKSTIRQNFKEEKNTHRRASVKRKHDRYDSESSSISAISNVELSDKENIYNEKEANKKTKKVLSNRNKVQKTTKKQSSKGQKTTQRHALIKKRKKRLDSESTSLSSNCTFELDDTDHSDYETLHDYYIAQCLREQEEKGLEAECFIEQEEKENVEPEIPFGLHDIVYSIDEKVNLKVDDWVIARFSTKKSVKHFVGKVLSLNDLKCPTVKFVRKVKNSKSEKGTFTYPTVDDVCVIKHLDDVLLVLPEPKIARRGQLIFDFNFSYYNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01182760;
- 90% Identity
- -
- 80% Identity
- -